RNA–Protein interactions for RNA: ENST00000394825.5

NR4A1-204, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR4A1, Length 2,528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-204ENST00000394825 RAD54L2Q9Y4B4 1467 aa23.44■■□□□ 1.34
NR4A1-204ENST00000394825 IGF1RP08069 1367 aa23.42■■□□□ 1.34
NR4A1-204ENST00000394825 WDR62O43379 1518 aa23.36■■□□□ 1.33
NR4A1-204ENST00000394825 ABCA5Q8WWZ7 1642 aa23.34■■□□□ 1.33
NR4A1-204ENST00000394825 CUL7Q14999 1698 aa23.34■■□□□ 1.33
NR4A1-204ENST00000394825 TARBP1Q13395 1621 aaKnown RBP23.34■■□□□ 1.33
NR4A1-204ENST00000394825 RBM19Q9Y4C8 960 aaKnown RBP23.32■■□□□ 1.32
NR4A1-204ENST00000394825 CARMIL1Q5VZK9 1371 aa23.32■■□□□ 1.32
NR4A1-204ENST00000394825 CLIP1P30622 1438 aa23.31■■□□□ 1.32
NR4A1-204ENST00000394825 ERCC6Q03468 1493 aa23.3■■□□□ 1.32
NR4A1-204ENST00000394825 GAPVD1Q14C86 1478 aa23.25■■□□□ 1.31
NR4A1-204ENST00000394825 THOC2Q8NI27 1593 aaKnown RBP23.25■■□□□ 1.31
NR4A1-204ENST00000394825 IFT140Q96RY7 1462 aa23.22■■□□□ 1.31
NR4A1-204ENST00000394825 APLP2Q06481 763 aa23.22■■□□□ 1.31
NR4A1-204ENST00000394825 TDRD9Q8NDG6 1382 aaKnown RBP23.19■■□□□ 1.3
NR4A1-204ENST00000394825 MYT1LQ9UL68 1186 aa23.16■■□□□ 1.3
NR4A1-204ENST00000394825 PBRM1Q86U86 1689 aa23.15■■□□□ 1.3
NR4A1-204ENST00000394825 VPS8Q8N3P4 1428 aa23.15■■□□□ 1.3
NR4A1-204ENST00000394825 MSH5O43196 834 aa23.15■■□□□ 1.3
NR4A1-204ENST00000394825 BCANQ96GW7 911 aa23.11■■□□□ 1.29
NR4A1-204ENST00000394825 FKBP8Q14318 412 aa23.09■■□□□ 1.29
NR4A1-204ENST00000394825 CTTNBP2Q8WZ74 1663 aa23.09■■□□□ 1.29
NR4A1-204ENST00000394825 GRIN2BQ13224 1484 aa23.07■■□□□ 1.28
NR4A1-204ENST00000394825 FANCIQ9NVI1 1328 aa23.07■■□□□ 1.28
NR4A1-204ENST00000394825 ARAP1Q96P48 1450 aa23.06■■□□□ 1.28
NR4A1-204ENST00000394825 HNRNPUL2Q1KMD3 747 aaKnown RBP23.05■■□□□ 1.28
NR4A1-204ENST00000394825 ARHGAP35Q9NRY4 1499 aa23.03■■□□□ 1.28
NR4A1-204ENST00000394825 AQRO60306 1485 aaKnown RBP eCLIP23.03■■□□□ 1.28
NR4A1-204ENST00000394825 ADAMTS12P58397 1594 aa23.03■■□□□ 1.28
NR4A1-204ENST00000394825 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
NR4A1-204ENST00000394825 ZNF608Q9ULD9 1512 aaPredicted RBP23■■□□□ 1.27
NR4A1-204ENST00000394825 EIF4G3O43432 1585 aaKnown RBP23■■□□□ 1.27
NR4A1-204ENST00000394825 RANGAP1P46060 587 aaPredicted RBP22.99■■□□□ 1.27
NR4A1-204ENST00000394825 EFCAB5A4FU69 1503 aa22.98■■□□□ 1.27
NR4A1-204ENST00000394825 NEFLP07196 543 aa22.93■■□□□ 1.26
NR4A1-204ENST00000394825 MAGI1Q96QZ7 1491 aaPredicted RBP22.88■■□□□ 1.25
NR4A1-204ENST00000394825 DEKP35659 375 aaKnown RBP22.88■■□□□ 1.25
NR4A1-204ENST00000394825 KCNH8Q96L42 1107 aa22.86■■□□□ 1.25
NR4A1-204ENST00000394825 DHX57Q6P158 1386 aaKnown RBP22.86■■□□□ 1.25
NR4A1-204ENST00000394825 SNAPC4Q5SXM2 1469 aa22.86■■□□□ 1.25
NR4A1-204ENST00000394825 ANO8Q9HCE9 1232 aaPredicted RBP22.85■■□□□ 1.25
NR4A1-204ENST00000394825 SAMD9Q5K651 1589 aa22.84■■□□□ 1.25
NR4A1-204ENST00000394825 ERICH6BQ5W0A0 696 aa22.81■■□□□ 1.24
NR4A1-204ENST00000394825 IQGAP2Q13576 1575 aa22.8■■□□□ 1.24
NR4A1-204ENST00000394825 MAP3K1Q13233 1512 aa22.79■■□□□ 1.24
NR4A1-204ENST00000394825 ITGAEP38570 1179 aa22.79■■□□□ 1.24
NR4A1-204ENST00000394825 GRIN2AQ12879 1464 aa22.78■■□□□ 1.24
NR4A1-204ENST00000394825 SYNJ2O15056 1496 aa22.77■■□□□ 1.24
NR4A1-204ENST00000394825 FMN1Q68DA7 1419 aa22.74■■□□□ 1.23
NR4A1-204ENST00000394825 FHOD3Q2V2M9 1422 aa22.73■■□□□ 1.23
NR4A1-204ENST00000394825 KIAA0586Q9BVV6 1533 aa22.72■■□□□ 1.23
NR4A1-204ENST00000394825 FYCO1Q9BQS8 1478 aa22.71■■□□□ 1.23
NR4A1-204ENST00000394825 PCF11O94913 1555 aaKnown RBP22.71■■□□□ 1.23
NR4A1-204ENST00000394825 UGGT2Q9NYU1 1516 aa22.7■■□□□ 1.22
NR4A1-204ENST00000394825 TIAM1Q13009 1591 aa22.69■■□□□ 1.22
NR4A1-204ENST00000394825 CASKIN1Q8WXD9 1431 aa22.69■■□□□ 1.22
NR4A1-204ENST00000394825 CDK11AQ9UQ88 783 aaPredicted RBP22.69■■□□□ 1.22
NR4A1-204ENST00000394825 CFAP43Q8NDM7 1665 aa22.68■■□□□ 1.22
NR4A1-204ENST00000394825 P3H3Q8IVL6 736 aa22.65■■□□□ 1.22
NR4A1-204ENST00000394825 CHMP7Q8WUX9 453 aaPredicted RBP22.64■■□□□ 1.22
NR4A1-204ENST00000394825 NUP160Q12769 1436 aa22.62■■□□□ 1.21
NR4A1-204ENST00000394825 CEP170Q5SW79 1584 aa22.61■■□□□ 1.21
NR4A1-204ENST00000394825 SALL2Q9Y467 1007 aaPredicted RBP22.61■■□□□ 1.21
NR4A1-204ENST00000394825 KANK4Q5T7N3 995 aaPredicted RBP22.59■■□□□ 1.21
NR4A1-204ENST00000394825 CCER2I3L3R5 266 aa22.58■■□□□ 1.21
NR4A1-204ENST00000394825 LRRC9Q6ZRR7 1453 aa22.57■■□□□ 1.2
NR4A1-204ENST00000394825 KIAA0556O60303 1618 aa22.56■■□□□ 1.2
NR4A1-204ENST00000394825 UBE2Q2Q8WVN8 375 aa22.56■■□□□ 1.2
NR4A1-204ENST00000394825 DISP1Q96F81 1524 aa22.52■■□□□ 1.2
NR4A1-204ENST00000394825 FBLN2P98095 1184 aa22.5■■□□□ 1.19
NR4A1-204ENST00000394825 HECW1Q76N89 1606 aa22.5■■□□□ 1.19
NR4A1-204ENST00000394825 TRIM52Q96A61 297 aa22.49■■□□□ 1.19
NR4A1-204ENST00000394825 RRBP1Q9P2E9 1410 aaKnown RBP22.49■■□□□ 1.19
NR4A1-204ENST00000394825 CCDC18Q5T9S5 1454 aa22.48■■□□□ 1.19
NR4A1-204ENST00000394825 CHD1O14646 1710 aa22.47■■□□□ 1.19
NR4A1-204ENST00000394825 LRRIQ1Q96JM4 1722 aa22.47■■□□□ 1.19
NR4A1-204ENST00000394825 PPP1R15AO75807 674 aaPredicted RBP22.46■■□□□ 1.19
NR4A1-204ENST00000394825 DDX10Q13206 875 aaKnown RBP22.46■■□□□ 1.19
NR4A1-204ENST00000394825 NOP58Q9Y2X3 529 aaKnown RBP22.46■■□□□ 1.19
NR4A1-204ENST00000394825 ATP1B4Q9UN42 357 aaPredicted RBP22.45■■□□□ 1.18
NR4A1-204ENST00000394825 CARMIL2Q6F5E8 1435 aa22.44■■□□□ 1.18
NR4A1-204ENST00000394825 JPH4Q96JJ6 628 aa22.39■■□□□ 1.17
NR4A1-204ENST00000394825 EHBP1L1Q8N3D4 1523 aa22.38■■□□□ 1.17
NR4A1-204ENST00000394825 CCNB3Q8WWL7 1395 aa22.38■■□□□ 1.17
NR4A1-204ENST00000394825 RAPGEF6Q8TEU7 1601 aa22.37■■□□□ 1.17
NR4A1-204ENST00000394825 NBR1Q14596 966 aa22.36■■□□□ 1.17
NR4A1-204ENST00000394825 EPRSP07814 1512 aaKnown RBP22.36■■□□□ 1.17
NR4A1-204ENST00000394825 CCDC136Q96JN2 1154 aa22.35■■□□□ 1.17
NR4A1-204ENST00000394825 ANP32CO43423 234 aa22.35■■□□□ 1.17
NR4A1-204ENST00000394825 MTUS2Q5JR59 1369 aa22.35■■□□□ 1.17
NR4A1-204ENST00000394825 PPP4R2Q9NY27 417 aa22.34■■□□□ 1.17
NR4A1-204ENST00000394825 SUPT6HQ7KZ85 1726 aaKnown RBP22.33■■□□□ 1.17
NR4A1-204ENST00000394825 PHLDB1Q86UU1 1377 aa22.32■■□□□ 1.16
NR4A1-204ENST00000394825 SHROOM2Q13796 1616 aa22.32■■□□□ 1.16
NR4A1-204ENST00000394825 MAPKBP1O60336 1514 aa22.31■■□□□ 1.16
NR4A1-204ENST00000394825 PAK3O75914 559 aaPredicted RBP22.3■■□□□ 1.16
NR4A1-204ENST00000394825 IL27Q8NEV9 243 aa22.3■■□□□ 1.16
NR4A1-204ENST00000394825 NUP153P49790 1475 aaKnown RBP22.27■■□□□ 1.16
NR4A1-204ENST00000394825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.27■■□□□ 1.16
NR4A1-204ENST00000394825 RTL5Q5HYW3 569 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms