RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 MAP3K1Q13233 1512 aa12.05□□□□□ -0.48
GAPVD1-207ENST00000394105 PBRM1Q86U86 1689 aa12.05□□□□□ -0.48
GAPVD1-207ENST00000394105 DHX57Q6P158 1386 aaKnown RBP12.04□□□□□ -0.48
GAPVD1-207ENST00000394105 UBTFP17480 764 aaKnown RBP12.03□□□□□ -0.48
GAPVD1-207ENST00000394105 CUL7Q14999 1698 aa12.03□□□□□ -0.48
GAPVD1-207ENST00000394105 PHLDB1Q86UU1 1377 aa12.03□□□□□ -0.48
GAPVD1-207ENST00000394105 ACIN1Q9UKV3 1341 aaKnown RBP12.02□□□□□ -0.49
GAPVD1-207ENST00000394105 ARHGEF11O15085 1522 aa12.02□□□□□ -0.49
GAPVD1-207ENST00000394105 PTPRKQ15262 1439 aa12.01□□□□□ -0.49
GAPVD1-207ENST00000394105 LRRC9Q6ZRR7 1453 aa11.99□□□□□ -0.49
GAPVD1-207ENST00000394105 KDM6BO15054 1643 aa11.99□□□□□ -0.49
GAPVD1-207ENST00000394105 ZEB1P37275 1124 aaPredicted RBP11.98□□□□□ -0.49
GAPVD1-207ENST00000394105 CARMIL1Q5VZK9 1371 aa11.97□□□□□ -0.49
GAPVD1-207ENST00000394105 GRIN2BQ13224 1484 aa11.95□□□□□ -0.5
GAPVD1-207ENST00000394105 FHOD3Q2V2M9 1422 aa11.93□□□□□ -0.5
GAPVD1-207ENST00000394105 THOC2Q8NI27 1593 aaKnown RBP11.92□□□□□ -0.5
GAPVD1-207ENST00000394105 ZNF608Q9ULD9 1512 aaPredicted RBP11.92□□□□□ -0.5
GAPVD1-207ENST00000394105 ADAMTS12P58397 1594 aa11.92□□□□□ -0.5
GAPVD1-207ENST00000394105 AQRO60306 1485 aaKnown RBP eCLIP11.9□□□□□ -0.52e-6■■■■■ 28.9
GAPVD1-207ENST00000394105 GTF3C3Q9Y5Q9 886 aa11.9□□□□□ -0.5
GAPVD1-207ENST00000394105 DIEXFQ68CQ4 756 aaKnown RBP11.88□□□□□ -0.51
GAPVD1-207ENST00000394105 RANGAP1P46060 587 aaPredicted RBP11.87□□□□□ -0.51
GAPVD1-207ENST00000394105 TDRD9Q8NDG6 1382 aaKnown RBP11.87□□□□□ -0.51
GAPVD1-207ENST00000394105 EFCAB5A4FU69 1503 aa11.87□□□□□ -0.51
GAPVD1-207ENST00000394105 WDR62O43379 1518 aa11.87□□□□□ -0.51
GAPVD1-207ENST00000394105 FYCO1Q9BQS8 1478 aa11.86□□□□□ -0.51
GAPVD1-207ENST00000394105 MIER1Q8N108 512 aa11.86□□□□□ -0.51
GAPVD1-207ENST00000394105 HNRNPUL2Q1KMD3 747 aaKnown RBP11.85□□□□□ -0.51
GAPVD1-207ENST00000394105 CASKIN1Q8WXD9 1431 aa11.85□□□□□ -0.51
GAPVD1-207ENST00000394105 DISP1Q96F81 1524 aa11.84□□□□□ -0.51
GAPVD1-207ENST00000394105 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
GAPVD1-207ENST00000394105 CCER1Q8TC90 406 aaPredicted RBP11.83□□□□□ -0.52
GAPVD1-207ENST00000394105 CCNB3Q8WWL7 1395 aa11.83□□□□□ -0.52
GAPVD1-207ENST00000394105 EIF4G3O43432 1585 aaKnown RBP11.83□□□□□ -0.52
GAPVD1-207ENST00000394105 UGGT2Q9NYU1 1516 aa11.82□□□□□ -0.52
GAPVD1-207ENST00000394105 RAB3GAP2Q9H2M9 1393 aa11.8□□□□□ -0.52
GAPVD1-207ENST00000394105 CEP170Q5SW79 1584 aa11.8□□□□□ -0.52
GAPVD1-207ENST00000394105 PTPN23Q9H3S7 1636 aa11.79□□□□□ -0.52
GAPVD1-207ENST00000394105 GCC2Q8IWJ2 1684 aa11.77□□□□□ -0.52
GAPVD1-207ENST00000394105 SUPT6HQ7KZ85 1726 aaKnown RBP11.77□□□□□ -0.53
GAPVD1-207ENST00000394105 CDK13Q14004 1512 aaKnown RBP11.76□□□□□ -0.53
GAPVD1-207ENST00000394105 IQGAP2Q13576 1575 aa11.74□□□□□ -0.53
GAPVD1-207ENST00000394105 KIAA0556O60303 1618 aa11.74□□□□□ -0.53
GAPVD1-207ENST00000394105 KCNH8Q96L42 1107 aa11.73□□□□□ -0.53
GAPVD1-207ENST00000394105 TCOF1Q13428 1488 aaKnown RBP11.72□□□□□ -0.53
GAPVD1-207ENST00000394105 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.72□□□□□ -0.53
GAPVD1-207ENST00000394105 ZNF316A6NFI3 1004 aaPredicted RBP11.72□□□□□ -0.53
GAPVD1-207ENST00000394105 NAIPQ13075 1403 aa11.71□□□□□ -0.53
GAPVD1-207ENST00000394105 FGD6Q6ZV73 1430 aa11.71□□□□□ -0.53
GAPVD1-207ENST00000394105 NUP153P49790 1475 aaKnown RBP11.7□□□□□ -0.54
GAPVD1-207ENST00000394105 P3H3Q8IVL6 736 aa11.7□□□□□ -0.54
GAPVD1-207ENST00000394105 NCOA2Q15596 1464 aa11.7□□□□□ -0.54
GAPVD1-207ENST00000394105 KIF14Q15058 1648 aa11.7□□□□□ -0.54
GAPVD1-207ENST00000394105 MRC2Q9UBG0 1479 aa11.7□□□□□ -0.54
GAPVD1-207ENST00000394105 EPRSP07814 1512 aaKnown RBP11.68□□□□□ -0.54
GAPVD1-207ENST00000394105 CROCC2H7BZ55 1655 aa11.68□□□□□ -0.54
GAPVD1-207ENST00000394105 CDC42BPAQ5VT25 1732 aa11.67□□□□□ -0.54
GAPVD1-207ENST00000394105 HECW1Q76N89 1606 aa11.67□□□□□ -0.54
GAPVD1-207ENST00000394105 PDS5BQ9NTI5 1447 aa11.66□□□□□ -0.54
GAPVD1-207ENST00000394105 ADCY10Q96PN6 1610 aa11.66□□□□□ -0.54
GAPVD1-207ENST00000394105 HFM1A2PYH4 1435 aa11.66□□□□□ -0.54
GAPVD1-207ENST00000394105 FHAD1B1AJZ9 1412 aa11.65□□□□□ -0.54
GAPVD1-207ENST00000394105 SETD5Q9C0A6 1442 aa11.64□□□□□ -0.55
GAPVD1-207ENST00000394105 CLSPNQ9HAW4 1339 aa11.63□□□□□ -0.55
GAPVD1-207ENST00000394105 EHBP1L1Q8N3D4 1523 aa11.63□□□□□ -0.55
GAPVD1-207ENST00000394105 SIN3AQ96ST3 1273 aa11.62□□□□□ -0.55
GAPVD1-207ENST00000394105 GRIN2AQ12879 1464 aa11.62□□□□□ -0.55
GAPVD1-207ENST00000394105 ABCA8O94911 1581 aa11.61□□□□□ -0.55
GAPVD1-207ENST00000394105 DNMT1P26358 1616 aaKnown RBP11.61□□□□□ -0.55
GAPVD1-207ENST00000394105 RAPGEF6Q8TEU7 1601 aa11.61□□□□□ -0.55
GAPVD1-207ENST00000394105 MYOM3Q5VTT5 1437 aa11.61□□□□□ -0.55
GAPVD1-207ENST00000394105 ERCC6L2Q5T890 1561 aa11.6□□□□□ -0.55
GAPVD1-207ENST00000394105 PELP1Q8IZL8 1130 aaKnown RBP11.59□□□□□ -0.55
GAPVD1-207ENST00000394105 FMN1Q68DA7 1419 aa11.59□□□□□ -0.55
GAPVD1-207ENST00000394105 CDC42BPBQ9Y5S2 1711 aa11.59□□□□□ -0.55
GAPVD1-207ENST00000394105 NUP160Q12769 1436 aa11.58□□□□□ -0.56
GAPVD1-207ENST00000394105 POLR1AO95602 1720 aaPredicted RBP11.58□□□□□ -0.56
GAPVD1-207ENST00000394105 YTHDC1Q96MU7 727 aaKnown RBP11.57□□□□□ -0.56
GAPVD1-207ENST00000394105 SHROOM2Q13796 1616 aa11.57□□□□□ -0.56
GAPVD1-207ENST00000394105 PLB1Q6P1J6 1458 aa11.57□□□□□ -0.56
GAPVD1-207ENST00000394105 CCDC18Q5T9S5 1454 aa11.57□□□□□ -0.56
GAPVD1-207ENST00000394105 IFT140Q96RY7 1462 aa11.57□□□□□ -0.56
GAPVD1-207ENST00000394105 BCORL1Q5H9F3 1711 aa11.56□□□□□ -0.56
GAPVD1-207ENST00000394105 CHD1O14646 1710 aa11.55□□□□□ -0.56
GAPVD1-207ENST00000394105 KIAA0586Q9BVV6 1533 aa11.55□□□□□ -0.56
GAPVD1-207ENST00000394105 PPP1R15AO75807 674 aaPredicted RBP11.54□□□□□ -0.56
GAPVD1-207ENST00000394105 TEX14Q8IWB6 1497 aa11.54□□□□□ -0.56
GAPVD1-207ENST00000394105 ABCC10Q5T3U5 1492 aa11.54□□□□□ -0.56
GAPVD1-207ENST00000394105 PZPP20742 1482 aa11.52□□□□□ -0.56
GAPVD1-207ENST00000394105 UACAQ9BZF9 1416 aa11.52□□□□□ -0.57
GAPVD1-207ENST00000394105 MBD5Q9P267 1494 aa11.52□□□□□ -0.57
GAPVD1-207ENST00000394105 ZNF644Q9H582 1327 aaPredicted RBP11.52□□□□□ -0.57
GAPVD1-207ENST00000394105 ABCC5O15440 1437 aa11.52□□□□□ -0.57
GAPVD1-207ENST00000394105 AKNAQ7Z591 1439 aa11.5□□□□□ -0.57
GAPVD1-207ENST00000394105 SUPT16HQ9Y5B9 1047 aaKnown RBP11.5□□□□□ -0.57
GAPVD1-207ENST00000394105 ADGBQ8N7X0 1667 aa11.5□□□□□ -0.57
GAPVD1-207ENST00000394105 SPATA31E1Q6ZUB1 1445 aa11.49□□□□□ -0.57
GAPVD1-207ENST00000394105 PRG4Q92954 1404 aaPredicted RBP11.49□□□□□ -0.57
GAPVD1-207ENST00000394105 GPATCH8Q9UKJ3 1502 aaKnown RBP11.48□□□□□ -0.57
GAPVD1-207ENST00000394105 ITGAEP38570 1179 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms