RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 NISCHQ9Y2I1 1504 aa17.41■□□□□ 0.38
GAPVD1-207ENST00000394105 CCDC180Q9P1Z9 1646 aa14.91□□□□□ -0.02
GAPVD1-207ENST00000394105 ZCCHC6Q5VYS8 1495 aaKnown RBP14.79□□□□□ -0.04
GAPVD1-207ENST00000394105 SHROOM4Q9ULL8 1493 aa14.38□□□□□ -0.11
GAPVD1-207ENST00000394105 DCAF1Q9Y4B6 1507 aa14.33□□□□□ -0.12
GAPVD1-207ENST00000394105 MYO15BQ96JP2 1530 aa14.16□□□□□ -0.14
GAPVD1-207ENST00000394105 ABCC9O60706 1549 aa13.96□□□□□ -0.18
GAPVD1-207ENST00000394105 UNC13AQ9UPW8 1703 aa13.86□□□□□ -0.19
GAPVD1-207ENST00000394105 SCRIBQ14160 1630 aa13.84□□□□□ -0.19
GAPVD1-207ENST00000394105 SUPT5HO00267 1087 aaKnown RBP13.81□□□□□ -0.2
GAPVD1-207ENST00000394105 CHIC1Q5VXU3 224 aa13.73□□□□□ -0.21
GAPVD1-207ENST00000394105 RSF1Q96T23 1441 aaPredicted RBP13.72□□□□□ -0.21
GAPVD1-207ENST00000394105 EIF4G1Q04637 1599 aaKnown RBP13.72□□□□□ -0.21
GAPVD1-207ENST00000394105 RB1CC1Q8TDY2 1594 aa13.72□□□□□ -0.21
GAPVD1-207ENST00000394105 CECR2Q9BXF3 1484 aa13.7□□□□□ -0.22
GAPVD1-207ENST00000394105 MROH2BQ7Z745 1585 aa13.63□□□□□ -0.23
GAPVD1-207ENST00000394105 WIZO95785 1651 aa13.61□□□□□ -0.23
GAPVD1-207ENST00000394105 NACADO15069 1562 aa13.6□□□□□ -0.23
GAPVD1-207ENST00000394105 DCAF8L2P0C7V8 631 aa13.56□□□□□ -0.24
GAPVD1-207ENST00000394105 BICRAQ9NZM4 1560 aa13.53□□□□□ -0.24
GAPVD1-207ENST00000394105 BAZ1AQ9NRL2 1556 aaPredicted RBP13.4□□□□□ -0.26
GAPVD1-207ENST00000394105 SMARCA4P51532 1647 aa13.33□□□□□ -0.28
GAPVD1-207ENST00000394105 LOC105371045A0A1W2PR82 267 aa13.32□□□□□ -0.28
GAPVD1-207ENST00000394105 SMARCA2P51531 1590 aa13.27□□□□□ -0.28
GAPVD1-207ENST00000394105 PPARGC1BQ86YN6 1023 aaKnown RBP13.25□□□□□ -0.29
GAPVD1-207ENST00000394105 PEG3Q9GZU2 1588 aa13.23□□□□□ -0.29
GAPVD1-207ENST00000394105 HRCP23327 699 aa13.22□□□□□ -0.29
GAPVD1-207ENST00000394105 TOP2AP11388 1531 aaKnown RBP13.19□□□□□ -0.3
GAPVD1-207ENST00000394105 ABCC8Q09428 1581 aa13.17□□□□□ -0.3
GAPVD1-207ENST00000394105 CCDC88BA6NC98 1476 aa13.15□□□□□ -0.3
GAPVD1-207ENST00000394105 RUSC2Q8N2Y8 1516 aa13.05□□□□□ -0.32
GAPVD1-207ENST00000394105 PCGF6Q9BYE7 350 aa13.01□□□□□ -0.33
GAPVD1-207ENST00000394105 SYNJ1O43426 1573 aa12.99□□□□□ -0.33
GAPVD1-207ENST00000394105 SOGA1O94964 1423 aa12.93□□□□□ -0.34
GAPVD1-207ENST00000394105 ATAD2BQ9ULI0 1458 aa12.91□□□□□ -0.34
GAPVD1-207ENST00000394105 PABPN1Q86U42 306 aaKnown RBP eCLIP12.87□□□□□ -0.35
GAPVD1-207ENST00000394105 BIVM-ERCC5R4GMW8 1640 aa12.78□□□□□ -0.36
GAPVD1-207ENST00000394105 TRIM41Q8WV44 630 aa12.77□□□□□ -0.36
GAPVD1-207ENST00000394105 TOP2BQ02880 1626 aa12.72□□□□□ -0.37
GAPVD1-207ENST00000394105 FAM9AQ8IZU1 332 aaPredicted RBP12.71□□□□□ -0.38
GAPVD1-207ENST00000394105 PRDM2Q13029 1718 aa12.71□□□□□ -0.38
GAPVD1-207ENST00000394105 WRNQ14191 1432 aaPredicted RBP eCLIP12.69□□□□□ -0.387e-6■■■■■ 39.7
GAPVD1-207ENST00000394105 HMGXB3Q12766 1538 aa12.69□□□□□ -0.38
GAPVD1-207ENST00000394105 CUX1P39880 1505 aa12.68□□□□□ -0.38
GAPVD1-207ENST00000394105 KIF21BO75037 1637 aa12.67□□□□□ -0.38
GAPVD1-207ENST00000394105 NCAPD3P42695 1498 aa12.65□□□□□ -0.38
GAPVD1-207ENST00000394105 BAZ1BQ9UIG0 1483 aaKnown RBP12.62□□□□□ -0.39
GAPVD1-207ENST00000394105 CEP162Q5TB80 1403 aa12.61□□□□□ -0.39
GAPVD1-207ENST00000394105 TRIM26Q12899 539 aaPredicted RBP12.6□□□□□ -0.39
GAPVD1-207ENST00000394105 RAPGEF2Q9Y4G8 1499 aa12.6□□□□□ -0.39
GAPVD1-207ENST00000394105 EHMT2Q96KQ7 1210 aa12.58□□□□□ -0.4
GAPVD1-207ENST00000394105 CFTRP13569 1480 aa12.56□□□□□ -0.4
GAPVD1-207ENST00000394105 SCAF1Q9H7N4 1312 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-207ENST00000394105 TNIKQ9UKE5 1360 aa12.54□□□□□ -0.4
GAPVD1-207ENST00000394105 PRXQ9BXM0 1461 aa12.54□□□□□ -0.4
GAPVD1-207ENST00000394105 DNAJC5BQ9UF47 199 aa12.49□□□□□ -0.41
GAPVD1-207ENST00000394105 CC2D2AQ9P2K1 1620 aa12.49□□□□□ -0.41
GAPVD1-207ENST00000394105 ARAP1Q96P48 1450 aa12.48□□□□□ -0.41
GAPVD1-207ENST00000394105 LRRIQ1Q96JM4 1722 aa12.48□□□□□ -0.41
GAPVD1-207ENST00000394105 WDR97A6NE52 1622 aa12.46□□□□□ -0.41
GAPVD1-207ENST00000394105 GOLGA3Q08378 1498 aa12.42□□□□□ -0.42
GAPVD1-207ENST00000394105 CLIP1P30622 1438 aa12.42□□□□□ -0.42
GAPVD1-207ENST00000394105 EEA1Q15075 1411 aa12.42□□□□□ -0.42
GAPVD1-207ENST00000394105 CSRNP3Q8WYN3 585 aa12.41□□□□□ -0.42
GAPVD1-207ENST00000394105 ERICH3Q5RHP9 1530 aa12.4□□□□□ -0.42
GAPVD1-207ENST00000394105 CEP164Q9UPV0 1460 aa12.37□□□□□ -0.43
GAPVD1-207ENST00000394105 NESP48681 1621 aa12.36□□□□□ -0.43
GAPVD1-207ENST00000394105 ARHGAP35Q9NRY4 1499 aa12.33□□□□□ -0.44
GAPVD1-207ENST00000394105 VPS8Q8N3P4 1428 aa12.31□□□□□ -0.44
GAPVD1-207ENST00000394105 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
GAPVD1-207ENST00000394105 IGF1RP08069 1367 aa12.27□□□□□ -0.45
GAPVD1-207ENST00000394105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.26□□□□□ -0.45
GAPVD1-207ENST00000394105 FGD5Q6ZNL6 1462 aa12.26□□□□□ -0.45
GAPVD1-207ENST00000394105 URB2Q14146 1524 aaKnown RBP12.25□□□□□ -0.45
GAPVD1-207ENST00000394105 ABCA5Q8WWZ7 1642 aa12.24□□□□□ -0.45
GAPVD1-207ENST00000394105 KANK4Q5T7N3 995 aaPredicted RBP12.23□□□□□ -0.45
GAPVD1-207ENST00000394105 CADPSQ9ULU8 1353 aa12.23□□□□□ -0.45
GAPVD1-207ENST00000394105 NEUROD1Q13562 356 aa12.22□□□□□ -0.45
GAPVD1-207ENST00000394105 TARBP1Q13395 1621 aaKnown RBP12.22□□□□□ -0.45
GAPVD1-207ENST00000394105 RAD54L2Q9Y4B4 1467 aa12.21□□□□□ -0.46
GAPVD1-207ENST00000394105 POLA1P09884 1462 aaPredicted RBP12.2□□□□□ -0.46
GAPVD1-207ENST00000394105 CFAP43Q8NDM7 1665 aa12.19□□□□□ -0.46
GAPVD1-207ENST00000394105 TOPBP1Q92547 1522 aa12.19□□□□□ -0.46
GAPVD1-207ENST00000394105 CUX2O14529 1486 aa12.19□□□□□ -0.46
GAPVD1-207ENST00000394105 DNMBPQ6XZF7 1577 aa12.18□□□□□ -0.46
GAPVD1-207ENST00000394105 CTTNBP2Q8WZ74 1663 aa12.16□□□□□ -0.46
GAPVD1-207ENST00000394105 ABCA10Q8WWZ4 1543 aa12.16□□□□□ -0.46
GAPVD1-207ENST00000394105 FANCD2Q9BXW9 1451 aa12.15□□□□□ -0.46
GAPVD1-207ENST00000394105 PCF11O94913 1555 aaKnown RBP12.15□□□□□ -0.46
GAPVD1-207ENST00000394105 RRBP1Q9P2E9 1410 aaKnown RBP12.14□□□□□ -0.47
GAPVD1-207ENST00000394105 MAPKBP1O60336 1514 aa12.14□□□□□ -0.47
GAPVD1-207ENST00000394105 SAMD9Q5K651 1589 aa12.13□□□□□ -0.47
GAPVD1-207ENST00000394105 TIAM1Q13009 1591 aa12.12□□□□□ -0.47
GAPVD1-207ENST00000394105 SNAPC4Q5SXM2 1469 aa12.12□□□□□ -0.47
GAPVD1-207ENST00000394105 MAGI3Q5TCQ9 1506 aa12.11□□□□□ -0.47
GAPVD1-207ENST00000394105 TTBK1Q5TCY1 1321 aaPredicted RBP12.11□□□□□ -0.47
GAPVD1-207ENST00000394105 KIF27Q86VH2 1401 aa12.08□□□□□ -0.48
GAPVD1-207ENST00000394105 LAMC3Q9Y6N6 1575 aa12.08□□□□□ -0.48
GAPVD1-207ENST00000394105 DENND4BO75064 1496 aaPredicted RBP12.07□□□□□ -0.48
GAPVD1-207ENST00000394105 KDM5BQ9UGL1 1544 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms