RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 EIF4G3O43432 1585 aaKnown RBP13.52□□□□□ -0.25
GAPVD1-204ENST00000394083 CARMIL1Q5VZK9 1371 aa13.5□□□□□ -0.25
GAPVD1-204ENST00000394083 UBTFP17480 764 aaKnown RBP13.5□□□□□ -0.25
GAPVD1-204ENST00000394083 AQRO60306 1485 aaKnown RBP eCLIP13.49□□□□□ -0.252e-6■■■■■ 28.9
GAPVD1-204ENST00000394083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
GAPVD1-204ENST00000394083 RANGAP1P46060 587 aaPredicted RBP13.45□□□□□ -0.26
GAPVD1-204ENST00000394083 GAPVD1Q14C86 1478 aa13.44□□□□□ -0.26
GAPVD1-204ENST00000394083 FHOD3Q2V2M9 1422 aa13.43□□□□□ -0.26
GAPVD1-204ENST00000394083 RRBP1Q9P2E9 1410 aaKnown RBP13.43□□□□□ -0.26
GAPVD1-204ENST00000394083 CEP170Q5SW79 1584 aa13.43□□□□□ -0.26
GAPVD1-204ENST00000394083 PHLDB1Q86UU1 1377 aa13.41□□□□□ -0.26
GAPVD1-204ENST00000394083 MRC2Q9UBG0 1479 aa13.4□□□□□ -0.26
GAPVD1-204ENST00000394083 ARHGEF11O15085 1522 aa13.4□□□□□ -0.26
GAPVD1-204ENST00000394083 GRIN2BQ13224 1484 aa13.39□□□□□ -0.27
GAPVD1-204ENST00000394083 DISP1Q96F81 1524 aa13.39□□□□□ -0.27
GAPVD1-204ENST00000394083 DENND4BO75064 1496 aaPredicted RBP13.38□□□□□ -0.27
GAPVD1-204ENST00000394083 KDM6BO15054 1643 aa13.38□□□□□ -0.27
GAPVD1-204ENST00000394083 MAPKBP1O60336 1514 aa13.38□□□□□ -0.27
GAPVD1-204ENST00000394083 PTPRKQ15262 1439 aa13.38□□□□□ -0.27
GAPVD1-204ENST00000394083 MAP3K1Q13233 1512 aa13.37□□□□□ -0.27
GAPVD1-204ENST00000394083 LRRC9Q6ZRR7 1453 aa13.37□□□□□ -0.27
GAPVD1-204ENST00000394083 PDS5BQ9NTI5 1447 aa13.36□□□□□ -0.27
GAPVD1-204ENST00000394083 EFCAB5A4FU69 1503 aa13.31□□□□□ -0.28
GAPVD1-204ENST00000394083 KDM5BQ9UGL1 1544 aa13.29□□□□□ -0.28
GAPVD1-204ENST00000394083 IQGAP2Q13576 1575 aa13.29□□□□□ -0.28
GAPVD1-204ENST00000394083 CHD1O14646 1710 aa13.28□□□□□ -0.28
GAPVD1-204ENST00000394083 KIAA0556O60303 1618 aa13.28□□□□□ -0.28
GAPVD1-204ENST00000394083 FYCO1Q9BQS8 1478 aa13.27□□□□□ -0.28
GAPVD1-204ENST00000394083 ERCC6L2Q5T890 1561 aa13.27□□□□□ -0.29
GAPVD1-204ENST00000394083 CDK13Q14004 1512 aaKnown RBP13.27□□□□□ -0.29
GAPVD1-204ENST00000394083 UGGT2Q9NYU1 1516 aa13.26□□□□□ -0.29
GAPVD1-204ENST00000394083 P3H3Q8IVL6 736 aa13.26□□□□□ -0.29
GAPVD1-204ENST00000394083 CASKIN1Q8WXD9 1431 aa13.26□□□□□ -0.29
GAPVD1-204ENST00000394083 DHX57Q6P158 1386 aaKnown RBP13.26□□□□□ -0.29
GAPVD1-204ENST00000394083 SUPT6HQ7KZ85 1726 aaKnown RBP13.23□□□□□ -0.29
GAPVD1-204ENST00000394083 GRIN2AQ12879 1464 aa13.22□□□□□ -0.29
GAPVD1-204ENST00000394083 KIF14Q15058 1648 aa13.21□□□□□ -0.29
GAPVD1-204ENST00000394083 IFT140Q96RY7 1462 aa13.21□□□□□ -0.3
GAPVD1-204ENST00000394083 FHAD1B1AJZ9 1412 aa13.2□□□□□ -0.3
GAPVD1-204ENST00000394083 NUP153P49790 1475 aaKnown RBP13.2□□□□□ -0.3
GAPVD1-204ENST00000394083 SHROOM2Q13796 1616 aa13.17□□□□□ -0.3
GAPVD1-204ENST00000394083 HNRNPUL2Q1KMD3 747 aaKnown RBP13.17□□□□□ -0.3
GAPVD1-204ENST00000394083 CDC42BPAQ5VT25 1732 aa13.15□□□□□ -0.3
GAPVD1-204ENST00000394083 NUP160Q12769 1436 aa13.15□□□□□ -0.3
GAPVD1-204ENST00000394083 EPRSP07814 1512 aaKnown RBP13.14□□□□□ -0.31
GAPVD1-204ENST00000394083 CCNB3Q8WWL7 1395 aa13.14□□□□□ -0.31
GAPVD1-204ENST00000394083 RAPGEF6Q8TEU7 1601 aa13.12□□□□□ -0.31
GAPVD1-204ENST00000394083 PTPN23Q9H3S7 1636 aa13.12□□□□□ -0.31
GAPVD1-204ENST00000394083 PLB1Q6P1J6 1458 aa13.12□□□□□ -0.31
GAPVD1-204ENST00000394083 GCC2Q8IWJ2 1684 aa13.11□□□□□ -0.31
GAPVD1-204ENST00000394083 NCOA2Q15596 1464 aa13.11□□□□□ -0.31
GAPVD1-204ENST00000394083 ABCA8O94911 1581 aa13.11□□□□□ -0.31
GAPVD1-204ENST00000394083 ADCY10Q96PN6 1610 aa13.11□□□□□ -0.31
GAPVD1-204ENST00000394083 CROCC2H7BZ55 1655 aa13.09□□□□□ -0.31
GAPVD1-204ENST00000394083 CDC42BPBQ9Y5S2 1711 aa13.09□□□□□ -0.31
GAPVD1-204ENST00000394083 KIAA0586Q9BVV6 1533 aa13.09□□□□□ -0.31
GAPVD1-204ENST00000394083 RAB3GAP2Q9H2M9 1393 aa13.08□□□□□ -0.32
GAPVD1-204ENST00000394083 SYNJ2O15056 1496 aa13.08□□□□□ -0.32
GAPVD1-204ENST00000394083 FGD6Q6ZV73 1430 aa13.07□□□□□ -0.32
GAPVD1-204ENST00000394083 MAGI1Q96QZ7 1491 aaPredicted RBP13.07□□□□□ -0.32
GAPVD1-204ENST00000394083 TCOF1Q13428 1488 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-204ENST00000394083 HECW1Q76N89 1606 aa13.06□□□□□ -0.32
GAPVD1-204ENST00000394083 EHBP1L1Q8N3D4 1523 aa13.03□□□□□ -0.32
GAPVD1-204ENST00000394083 NAIPQ13075 1403 aa13.03□□□□□ -0.32
GAPVD1-204ENST00000394083 CLASP1Q7Z460 1538 aa13.01□□□□□ -0.33
GAPVD1-204ENST00000394083 FMN1Q68DA7 1419 aa13.01□□□□□ -0.33
GAPVD1-204ENST00000394083 ERCC6Q03468 1493 aa13□□□□□ -0.33
GAPVD1-204ENST00000394083 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
GAPVD1-204ENST00000394083 CCER1Q8TC90 406 aaPredicted RBP12.99□□□□□ -0.33
GAPVD1-204ENST00000394083 ABCC10Q5T3U5 1492 aa12.98□□□□□ -0.33
GAPVD1-204ENST00000394083 MYOM3Q5VTT5 1437 aa12.98□□□□□ -0.33
GAPVD1-204ENST00000394083 PRG4Q92954 1404 aaPredicted RBP12.98□□□□□ -0.33
GAPVD1-204ENST00000394083 ZNF644Q9H582 1327 aaPredicted RBP12.98□□□□□ -0.33
GAPVD1-204ENST00000394083 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.97□□□□□ -0.33
GAPVD1-204ENST00000394083 TTC37Q6PGP7 1564 aa12.96□□□□□ -0.34
GAPVD1-204ENST00000394083 HFM1A2PYH4 1435 aa12.94□□□□□ -0.34
GAPVD1-204ENST00000394083 ATP10BO94823 1461 aa12.94□□□□□ -0.34
GAPVD1-204ENST00000394083 SAMD9LQ8IVG5 1584 aa12.91□□□□□ -0.34
GAPVD1-204ENST00000394083 GPATCH8Q9UKJ3 1502 aaKnown RBP12.91□□□□□ -0.34
GAPVD1-204ENST00000394083 ARID3CA6NKF2 412 aa12.9□□□□□ -0.34
GAPVD1-204ENST00000394083 ABCC2Q92887 1545 aa12.9□□□□□ -0.34
GAPVD1-204ENST00000394083 SETD5Q9C0A6 1442 aa12.9□□□□□ -0.34
GAPVD1-204ENST00000394083 CCDC18Q5T9S5 1454 aa12.89□□□□□ -0.35
GAPVD1-204ENST00000394083 SIN3AQ96ST3 1273 aa12.89□□□□□ -0.35
GAPVD1-204ENST00000394083 ABCC5O15440 1437 aa12.89□□□□□ -0.35
GAPVD1-204ENST00000394083 ADGBQ8N7X0 1667 aa12.89□□□□□ -0.35
GAPVD1-204ENST00000394083 PREX2Q70Z35 1606 aa12.87□□□□□ -0.35
GAPVD1-204ENST00000394083 ARHGEF12Q9NZN5 1544 aa12.87□□□□□ -0.35
GAPVD1-204ENST00000394083 ITGAEP38570 1179 aa12.87□□□□□ -0.35
GAPVD1-204ENST00000394083 ZCCHC11Q5TAX3 1644 aaKnown RBP12.86□□□□□ -0.35
GAPVD1-204ENST00000394083 MBD5Q9P267 1494 aa12.85□□□□□ -0.35
GAPVD1-204ENST00000394083 ZEB1P37275 1124 aaPredicted RBP12.84□□□□□ -0.35
GAPVD1-204ENST00000394083 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.84□□□□□ -0.35
GAPVD1-204ENST00000394083 PZPP20742 1482 aa12.84□□□□□ -0.35
GAPVD1-204ENST00000394083 CAMSAP2Q08AD1 1489 aa12.83□□□□□ -0.36
GAPVD1-204ENST00000394083 DAPK1P53355 1430 aa12.83□□□□□ -0.36
GAPVD1-204ENST00000394083 ITSN2Q9NZM3 1697 aa12.82□□□□□ -0.36
GAPVD1-204ENST00000394083 BCORL1Q5H9F3 1711 aa12.8□□□□□ -0.36
GAPVD1-204ENST00000394083 JPH4Q96JJ6 628 aa12.8□□□□□ -0.36
GAPVD1-204ENST00000394083 SCAF1Q9H7N4 1312 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms