RNA–Protein interactions for RNA: ENST00000394074.6

NAE1-204, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5 BASIC

Gene NAE1, Length 1,654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-204ENST00000394074 LOC105371045A0A1W2PR82 267 aa36.26■■■■□ 3.39
NAE1-204ENST00000394074 KIAA0586Q9BVV6 1533 aa36.15■■■■□ 3.38
NAE1-204ENST00000394074 CTTNBP2Q8WZ74 1663 aa36.13■■■■□ 3.37
NAE1-204ENST00000394074 CLASP1Q7Z460 1538 aa36.09■■■■□ 3.37
NAE1-204ENST00000394074 IQGAP2Q13576 1575 aa36.07■■■■□ 3.36
NAE1-204ENST00000394074 TNIKQ9UKE5 1360 aa36.06■■■■□ 3.36
NAE1-204ENST00000394074 JPH4Q96JJ6 628 aa36■■■■□ 3.35
NAE1-204ENST00000394074 RANGAP1P46060 587 aaPredicted RBP35.98■■■■□ 3.35
NAE1-204ENST00000394074 SHROOM2Q13796 1616 aa35.88■■■■□ 3.33
NAE1-204ENST00000394074 UGGT2Q9NYU1 1516 aa35.87■■■■□ 3.33
NAE1-204ENST00000394074 PRG4Q92954 1404 aaPredicted RBP35.84■■■■□ 3.33
NAE1-204ENST00000394074 CEP162Q5TB80 1403 aa35.79■■■■□ 3.32
NAE1-204ENST00000394074 CARMIL2Q6F5E8 1435 aa35.78■■■■□ 3.32
NAE1-204ENST00000394074 CLIP1P30622 1438 aa35.76■■■■□ 3.32
NAE1-204ENST00000394074 DISP1Q96F81 1524 aa35.75■■■■□ 3.31
NAE1-204ENST00000394074 P3H3Q8IVL6 736 aa35.73■■■■□ 3.31
NAE1-204ENST00000394074 EFCAB5A4FU69 1503 aa35.72■■■■□ 3.31
NAE1-204ENST00000394074 ERCC6L2Q5T890 1561 aa35.71■■■■□ 3.31
NAE1-204ENST00000394074 KIAA0556O60303 1618 aa35.7■■■■□ 3.31
NAE1-204ENST00000394074 SAMD9Q5K651 1589 aa35.7■■■■□ 3.31
NAE1-204ENST00000394074 ARHGAP35Q9NRY4 1499 aa35.68■■■■□ 3.3
NAE1-204ENST00000394074 ARHGEF11O15085 1522 aa35.66■■■■□ 3.3
NAE1-204ENST00000394074 FHOD3Q2V2M9 1422 aa35.61■■■■□ 3.29
NAE1-204ENST00000394074 TTBK1Q5TCY1 1321 aaPredicted RBP35.6■■■■□ 3.29
NAE1-204ENST00000394074 DNAJC5Q9H3Z4 198 aa35.59■■■■□ 3.29
NAE1-204ENST00000394074 RIMBP3CA6NJZ7 1639 aa35.56■■■■□ 3.28
NAE1-204ENST00000394074 RIMBP3BA6NNM3 1639 aa35.56■■■■□ 3.28
NAE1-204ENST00000394074 RIMBP3Q9UFD9 1639 aa35.56■■■■□ 3.28
NAE1-204ENST00000394074 ARAP1Q96P48 1450 aa35.53■■■■□ 3.28
NAE1-204ENST00000394074 PTPRGP23470 1445 aa35.52■■■■□ 3.28
NAE1-204ENST00000394074 FMN1Q68DA7 1419 aa35.42■■■■□ 3.26
NAE1-204ENST00000394074 CYB5RLQ6IPT4 315 aa35.37■■■■□ 3.25
NAE1-204ENST00000394074 PLB1Q6P1J6 1458 aa35.32■■■■□ 3.24
NAE1-204ENST00000394074 VPS8Q8N3P4 1428 aa35.29■■■■□ 3.24
NAE1-204ENST00000394074 UACAQ9BZF9 1416 aa35.29■■■■□ 3.24
NAE1-204ENST00000394074 ATP1B4Q9UN42 357 aaPredicted RBP35.25■■■■□ 3.23
NAE1-204ENST00000394074 ABCA8O94911 1581 aa35.25■■■■□ 3.23
NAE1-204ENST00000394074 RAPGEF6Q8TEU7 1601 aa35.23■■■■□ 3.23
NAE1-204ENST00000394074 CASKIN1Q8WXD9 1431 aa35.2■■■■□ 3.23
NAE1-204ENST00000394074 PCF11O94913 1555 aaKnown RBP35.2■■■■□ 3.23
NAE1-204ENST00000394074 ABCC2Q92887 1545 aa35.19■■■■□ 3.22
NAE1-204ENST00000394074 UHRF1BP1LA0JNW5 1464 aa35.17■■■■□ 3.22
NAE1-204ENST00000394074 FYCO1Q9BQS8 1478 aa35.16■■■■□ 3.22
NAE1-204ENST00000394074 ADCY10Q96PN6 1610 aa35.14■■■■□ 3.22
NAE1-204ENST00000394074 HECW1Q76N89 1606 aa35.13■■■■□ 3.21
NAE1-204ENST00000394074 ARID3CA6NKF2 412 aa35.13■■■■□ 3.21
NAE1-204ENST00000394074 NUP153P49790 1475 aaKnown RBP35.12■■■■□ 3.21
NAE1-204ENST00000394074 NPM1P06748 294 aaKnown RBP eCLIP35.05■■■■□ 3.2
NAE1-204ENST00000394074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.03■■■■□ 3.2
NAE1-204ENST00000394074 HNRNPUL2Q1KMD3 747 aaKnown RBP35.03■■■■□ 3.2
NAE1-204ENST00000394074 EPRSP07814 1512 aaKnown RBP35.02■■■■□ 3.2
NAE1-204ENST00000394074 KDM5BQ9UGL1 1544 aa35.01■■■■□ 3.19
NAE1-204ENST00000394074 ATP10BO94823 1461 aa35■■■■□ 3.19
NAE1-204ENST00000394074 CCDC18Q5T9S5 1454 aa34.98■■■■□ 3.19
NAE1-204ENST00000394074 CDK13Q14004 1512 aaKnown RBP34.98■■■■□ 3.19
NAE1-204ENST00000394074 APLP2Q06481 763 aa34.98■■■■□ 3.19
NAE1-204ENST00000394074 LRRIQ1Q96JM4 1722 aa34.96■■■■□ 3.19
NAE1-204ENST00000394074 ZCCHC11Q5TAX3 1644 aaKnown RBP34.94■■■■□ 3.18
NAE1-204ENST00000394074 CDK11AQ9UQ88 783 aaPredicted RBP34.87■■■■□ 3.17
NAE1-204ENST00000394074 TIAM1Q13009 1591 aa34.85■■■■□ 3.17
NAE1-204ENST00000394074 PLEKHD1A6NEE1 506 aa34.83■■■■□ 3.17
NAE1-204ENST00000394074 MAP3K1Q13233 1512 aa34.83■■■■□ 3.17
NAE1-204ENST00000394074 CFAP43Q8NDM7 1665 aa34.82■■■■□ 3.17
NAE1-204ENST00000394074 ASXL2Q76L83 1435 aa34.79■■■■□ 3.16
NAE1-204ENST00000394074 MTUS2Q5JR59 1369 aa34.76■■■■□ 3.16
NAE1-204ENST00000394074 MAPKBP1O60336 1514 aa34.76■■■■□ 3.16
NAE1-204ENST00000394074 KANK4Q5T7N3 995 aaPredicted RBP34.73■■■■□ 3.15
NAE1-204ENST00000394074 WDR7Q9Y4E6 1490 aa34.73■■■■□ 3.15
NAE1-204ENST00000394074 MAGI3Q5TCQ9 1506 aa34.72■■■■□ 3.15
NAE1-204ENST00000394074 LRRC9Q6ZRR7 1453 aa34.71■■■■□ 3.15
NAE1-204ENST00000394074 TROQ12816 1431 aaPredicted RBP34.71■■■■□ 3.15
NAE1-204ENST00000394074 KCNH8Q96L42 1107 aa34.69■■■■□ 3.14
NAE1-204ENST00000394074 EHBP1L1Q8N3D4 1523 aa34.66■■■■□ 3.14
NAE1-204ENST00000394074 PPARGC1BQ86YN6 1023 aaKnown RBP34.66■■■■□ 3.14
NAE1-204ENST00000394074 KIF14Q15058 1648 aa34.56■■■■□ 3.12
NAE1-204ENST00000394074 ABCC10Q5T3U5 1492 aa34.52■■■■□ 3.12
NAE1-204ENST00000394074 SUPT6HQ7KZ85 1726 aaKnown RBP34.51■■■■□ 3.12
NAE1-204ENST00000394074 FAM69CQ0P6D2 419 aa34.49■■■■□ 3.11
NAE1-204ENST00000394074 NCOA2Q15596 1464 aa34.48■■■■□ 3.11
NAE1-204ENST00000394074 DIP2BQ9P265 1576 aa34.48■■■■□ 3.11
NAE1-204ENST00000394074 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.46■■■■□ 3.11
NAE1-204ENST00000394074 GLI2P10070 1586 aa34.42■■■■□ 3.1
NAE1-204ENST00000394074 TTC37Q6PGP7 1564 aa34.42■■■■□ 3.1
NAE1-204ENST00000394074 TRHP20396 242 aaPredicted RBP34.41■■■■□ 3.1
NAE1-204ENST00000394074 ABCA9Q8IUA7 1624 aa34.41■■■■□ 3.1
NAE1-204ENST00000394074 CCNB3Q8WWL7 1395 aa34.4■■■■□ 3.1
NAE1-204ENST00000394074 KIF13AQ9H1H9 1805 aa34.35■■■■□ 3.09
NAE1-204ENST00000394074 CD109Q6YHK3 1445 aa34.35■■■■□ 3.09
NAE1-204ENST00000394074 PHLDB1Q86UU1 1377 aa34.34■■■■□ 3.09
NAE1-204ENST00000394074 GPATCH8Q9UKJ3 1502 aaKnown RBP34.32■■■■□ 3.08
NAE1-204ENST00000394074 MAP3K4Q9Y6R4 1608 aa34.3■■■■□ 3.08
NAE1-204ENST00000394074 MYO5CQ9NQX4 1742 aa34.29■■■■□ 3.08
NAE1-204ENST00000394074 PLCH2O75038 1416 aa34.28■■■■□ 3.08
NAE1-204ENST00000394074 MYOM3Q5VTT5 1437 aa34.28■■■■□ 3.08
NAE1-204ENST00000394074 CDC42BPAQ5VT25 1732 aa34.27■■■■□ 3.08
NAE1-204ENST00000394074 CFDP1Q9UEE9 299 aaPredicted RBP34.26■■■■□ 3.08
NAE1-204ENST00000394074 ITSN2Q9NZM3 1697 aa34.25■■■■□ 3.07
NAE1-204ENST00000394074 PREX2Q70Z35 1606 aa34.24■■■■□ 3.07
NAE1-204ENST00000394074 ARHGAP5Q13017 1502 aa34.23■■■■□ 3.07
NAE1-204ENST00000394074 CDC42BPBQ9Y5S2 1711 aa34.2■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms