RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 DDX10Q13206 875 aaKnown RBP26.8■■□□□ 1.88
SMARCC2-203ENST00000394023 FHOD3Q2V2M9 1422 aa26.8■■□□□ 1.88
SMARCC2-203ENST00000394023 FHAD1B1AJZ9 1412 aa26.77■■□□□ 1.88
SMARCC2-203ENST00000394023 NESP48681 1621 aa26.77■■□□□ 1.88
SMARCC2-203ENST00000394023 POLR3GLQ9BT43 218 aa26.76■■□□□ 1.88
SMARCC2-203ENST00000394023 RRP7BPQ9NSQ0 103 aa26.75■■□□□ 1.87
SMARCC2-203ENST00000394023 DNAJC5BQ9UF47 199 aa26.75■■□□□ 1.87
SMARCC2-203ENST00000394023 ZNF777Q9ULD5 760 aaPredicted RBP26.73■■□□□ 1.87
SMARCC2-203ENST00000394023 CC2D2AQ9P2K1 1620 aa26.72■■□□□ 1.87
SMARCC2-203ENST00000394023 ERICH3Q5RHP9 1530 aa26.72■■□□□ 1.87
SMARCC2-203ENST00000394023 DHX57Q6P158 1386 aaKnown RBP26.71■■□□□ 1.87
SMARCC2-203ENST00000394023 ARHGAP35Q9NRY4 1499 aa26.71■■□□□ 1.87
SMARCC2-203ENST00000394023 RAB3GAP2Q9H2M9 1393 aa26.7■■□□□ 1.87
SMARCC2-203ENST00000394023 CLSPNQ9HAW4 1339 aa26.7■■□□□ 1.86
SMARCC2-203ENST00000394023 TONSLQ96HA7 1378 aa26.67■■□□□ 1.86
SMARCC2-203ENST00000394023 PDS5BQ9NTI5 1447 aa26.64■■□□□ 1.86
SMARCC2-203ENST00000394023 NEFLP07196 543 aa26.61■■□□□ 1.85
SMARCC2-203ENST00000394023 CHMP7Q8WUX9 453 aaPredicted RBP26.61■■□□□ 1.85
SMARCC2-203ENST00000394023 ZNF326Q5BKZ1 582 aaKnown RBP26.59■■□□□ 1.85
SMARCC2-203ENST00000394023 SETD5Q9C0A6 1442 aa26.59■■□□□ 1.85
SMARCC2-203ENST00000394023 ANP32CO43423 234 aa26.59■■□□□ 1.85
SMARCC2-203ENST00000394023 BIVM-ERCC5R4GMW8 1640 aa26.56■■□□□ 1.84
SMARCC2-203ENST00000394023 BCANQ96GW7 911 aa26.55■■□□□ 1.84
SMARCC2-203ENST00000394023 CDK11AQ9UQ88 783 aaPredicted RBP26.55■■□□□ 1.84
SMARCC2-203ENST00000394023 PHLDB1Q86UU1 1377 aa26.52■■□□□ 1.84
SMARCC2-203ENST00000394023 POLA1P09884 1462 aaPredicted RBP26.47■■□□□ 1.83
SMARCC2-203ENST00000394023 FMN1Q68DA7 1419 aa26.46■■□□□ 1.83
SMARCC2-203ENST00000394023 TOPBP1Q92547 1522 aa26.45■■□□□ 1.83
SMARCC2-203ENST00000394023 RRBP1Q9P2E9 1410 aaKnown RBP26.41■■□□□ 1.82
SMARCC2-203ENST00000394023 GAPVD1Q14C86 1478 aa26.4■■□□□ 1.82
SMARCC2-203ENST00000394023 LRRC9Q6ZRR7 1453 aa26.4■■□□□ 1.82
SMARCC2-203ENST00000394023 MYT1LQ9UL68 1186 aa26.36■■□□□ 1.81
SMARCC2-203ENST00000394023 ERCC6Q03468 1493 aa26.35■■□□□ 1.81
SMARCC2-203ENST00000394023 FOXD1Q16676 465 aa26.32■■□□□ 1.8
SMARCC2-203ENST00000394023 AQRO60306 1485 aaKnown RBP eCLIP26.32■■□□□ 1.81e-7■■■■□ 24.9
SMARCC2-203ENST00000394023 SLC4A1APQ9BWU0 796 aaKnown RBP26.3■■□□□ 1.8
SMARCC2-203ENST00000394023 CFDP1Q9UEE9 299 aaPredicted RBP26.27■■□□□ 1.8
SMARCC2-203ENST00000394023 DNMBPQ6XZF7 1577 aa26.27■■□□□ 1.8
SMARCC2-203ENST00000394023 KCNH8Q96L42 1107 aa26.25■■□□□ 1.79
SMARCC2-203ENST00000394023 PPP1R15AO75807 674 aaPredicted RBP26.24■■□□□ 1.79
SMARCC2-203ENST00000394023 TIAM1Q13009 1591 aa26.23■■□□□ 1.79
SMARCC2-203ENST00000394023 ABCA10Q8WWZ4 1543 aa26.22■■□□□ 1.79
SMARCC2-203ENST00000394023 CASKIN1Q8WXD9 1431 aa26.2■■□□□ 1.79
SMARCC2-203ENST00000394023 FKBP8Q14318 412 aa26.19■■□□□ 1.78
SMARCC2-203ENST00000394023 PLEKHD1A6NEE1 506 aa26.18■■□□□ 1.78
SMARCC2-203ENST00000394023 FGD6Q6ZV73 1430 aa26.16■■□□□ 1.78
SMARCC2-203ENST00000394023 HNRNPUQ00839 825 aaKnown RBP eCLIP26.15■■□□□ 1.78
SMARCC2-203ENST00000394023 URB2Q14146 1524 aaKnown RBP26.15■■□□□ 1.78
SMARCC2-203ENST00000394023 EIF4G2P78344 907 aaKnown RBP eCLIP26.15■■□□□ 1.782e-6■■■■□ 25.7
SMARCC2-203ENST00000394023 TIMELESSQ9UNS1 1208 aa26.14■■□□□ 1.78
SMARCC2-203ENST00000394023 TSPY4P0CV99 314 aa26.13■■□□□ 1.77
SMARCC2-203ENST00000394023 TSPY10P0CW01 314 aa26.13■■□□□ 1.77
SMARCC2-203ENST00000394023 KDM2AQ9Y2K7 1162 aa26.11■■□□□ 1.77
SMARCC2-203ENST00000394023 PCF11O94913 1555 aaKnown RBP26.1■■□□□ 1.77
SMARCC2-203ENST00000394023 FYCO1Q9BQS8 1478 aa26.1■■□□□ 1.77
SMARCC2-203ENST00000394023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.1■■□□□ 1.773e-7■■■□□ 19.2
SMARCC2-203ENST00000394023 FAM9BQ8IZU0 186 aa26.09■■□□□ 1.77
SMARCC2-203ENST00000394023 MPHOSPH9Q99550 1183 aa26.08■■□□□ 1.77
SMARCC2-203ENST00000394023 CCDC18Q5T9S5 1454 aa26.05■■□□□ 1.76
SMARCC2-203ENST00000394023 ZNF644Q9H582 1327 aaPredicted RBP26.04■■□□□ 1.76
SMARCC2-203ENST00000394023 NCOA2Q15596 1464 aa26.04■■□□□ 1.76
SMARCC2-203ENST00000394023 MYOM3Q5VTT5 1437 aa26.02■■□□□ 1.76
SMARCC2-203ENST00000394023 JPH4Q96JJ6 628 aa26.01■■□□□ 1.75
SMARCC2-203ENST00000394023 LAMC3Q9Y6N6 1575 aa26.01■■□□□ 1.75
SMARCC2-203ENST00000394023 EFCAB5A4FU69 1503 aa26■■□□□ 1.75
SMARCC2-203ENST00000394023 HSPA5P11021 654 aaKnown RBP26■■□□□ 1.75
SMARCC2-203ENST00000394023 L3MBTL2Q969R5 705 aa25.97■■□□□ 1.75
SMARCC2-203ENST00000394023 SUPT16HQ9Y5B9 1047 aaKnown RBP25.97■■□□□ 1.75
SMARCC2-203ENST00000394023 SENP3-EIF4A1A0A087X0R7 540 aa25.97■■□□□ 1.75
SMARCC2-203ENST00000394023 IRX6P78412 446 aaPredicted RBP25.95■■□□□ 1.74
SMARCC2-203ENST00000394023 MRS2Q9HD23 443 aa25.94■■□□□ 1.74
SMARCC2-203ENST00000394023 GRIN2BQ13224 1484 aa25.9■■□□□ 1.74
SMARCC2-203ENST00000394023 RGL3Q3MIN7 710 aa25.9■■□□□ 1.74
SMARCC2-203ENST00000394023 MAP3K1Q13233 1512 aa25.89■■□□□ 1.74
SMARCC2-203ENST00000394023 PKD2Q13563 968 aa25.87■■□□□ 1.73
SMARCC2-203ENST00000394023 MRC2Q9UBG0 1479 aa25.87■■□□□ 1.73
SMARCC2-203ENST00000394023 CUL7Q14999 1698 aa25.87■■□□□ 1.73
SMARCC2-203ENST00000394023 CARMIL2Q6F5E8 1435 aa25.86■■□□□ 1.73
SMARCC2-203ENST00000394023 UACAQ9BZF9 1416 aa25.85■■□□□ 1.73
SMARCC2-203ENST00000394023 WDR97A6NE52 1622 aa25.83■■□□□ 1.73
SMARCC2-203ENST00000394023 HNRNPMP52272 730 aaKnown RBP eCLIP25.81■■□□□ 1.72
SMARCC2-203ENST00000394023 CDK13Q14004 1512 aaKnown RBP25.8■■□□□ 1.72
SMARCC2-203ENST00000394023 ZNF608Q9ULD9 1512 aaPredicted RBP25.8■■□□□ 1.72
SMARCC2-203ENST00000394023 ERICH6Q7L0X2 663 aa25.78■■□□□ 1.72
SMARCC2-203ENST00000394023 PRDM2Q13029 1718 aa25.77■■□□□ 1.72
SMARCC2-203ENST00000394023 HFM1A2PYH4 1435 aa25.77■■□□□ 1.72
SMARCC2-203ENST00000394023 CCER2I3L3R5 266 aa25.77■■□□□ 1.72
SMARCC2-203ENST00000394023 SALL2Q9Y467 1007 aaPredicted RBP25.76■■□□□ 1.71
SMARCC2-203ENST00000394023 PTPRKQ15262 1439 aa25.76■■□□□ 1.71
SMARCC2-203ENST00000394023 NAIPQ13075 1403 aa25.75■■□□□ 1.71
SMARCC2-203ENST00000394023 CARD11Q9BXL7 1154 aa25.75■■□□□ 1.71
SMARCC2-203ENST00000394023 MAPKBP1O60336 1514 aa25.75■■□□□ 1.71
SMARCC2-203ENST00000394023 SNAPC4Q5SXM2 1469 aa25.74■■□□□ 1.71
SMARCC2-203ENST00000394023 DCAF11Q8TEB1 546 aa25.72■■□□□ 1.71
SMARCC2-203ENST00000394023 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.72■■□□□ 1.71
SMARCC2-203ENST00000394023 NUP155O75694 1391 aa25.71■■□□□ 1.71
SMARCC2-203ENST00000394023 IFT140Q96RY7 1462 aa25.71■■□□□ 1.71
SMARCC2-203ENST00000394023 EPRSP07814 1512 aaKnown RBP25.71■■□□□ 1.71
SMARCC2-203ENST00000394023 EHBP1L1Q8N3D4 1523 aa25.7■■□□□ 1.7
SMARCC2-203ENST00000394023 TMC1Q8TDI8 760 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms