RNA–Protein interactions for RNA: ENST00000393559.1

LAMB1-202, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-202ENST00000393559 NPM1P06748 294 aaKnown RBP eCLIP22.87■■□□□ 1.25
LAMB1-202ENST00000393559 FAM69CQ0P6D2 419 aa22.83■■□□□ 1.25
LAMB1-202ENST00000393559 IGF1RP08069 1367 aa22.76■■□□□ 1.23
LAMB1-202ENST00000393559 RUSC2Q8N2Y8 1516 aa22.76■■□□□ 1.23
LAMB1-202ENST00000393559 TTBK1Q5TCY1 1321 aaPredicted RBP22.73■■□□□ 1.23
LAMB1-202ENST00000393559 KIF27Q86VH2 1401 aa22.73■■□□□ 1.23
LAMB1-202ENST00000393559 KIAA0586Q9BVV6 1533 aa22.7■■□□□ 1.22
LAMB1-202ENST00000393559 ABCC10Q5T3U5 1492 aa22.69■■□□□ 1.22
LAMB1-202ENST00000393559 KIF13AQ9H1H9 1805 aa22.68■■□□□ 1.22
LAMB1-202ENST00000393559 FAM9AQ8IZU1 332 aaPredicted RBP22.66■■□□□ 1.22
LAMB1-202ENST00000393559 ADCY10Q96PN6 1610 aa22.63■■□□□ 1.21
LAMB1-202ENST00000393559 MAPKBP1O60336 1514 aa22.62■■□□□ 1.21
LAMB1-202ENST00000393559 PTPRGP23470 1445 aa22.61■■□□□ 1.21
LAMB1-202ENST00000393559 EEA1Q15075 1411 aa22.61■■□□□ 1.21
LAMB1-202ENST00000393559 CARMIL1Q5VZK9 1371 aa22.61■■□□□ 1.21
LAMB1-202ENST00000393559 CUL7Q14999 1698 aa22.58■■□□□ 1.2
LAMB1-202ENST00000393559 DIP2BQ9P265 1576 aa22.57■■□□□ 1.2
LAMB1-202ENST00000393559 CARMIL2Q6F5E8 1435 aa22.53■■□□□ 1.2
LAMB1-202ENST00000393559 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.2
LAMB1-202ENST00000393559 CSRNP3Q8WYN3 585 aa22.5■■□□□ 1.19
LAMB1-202ENST00000393559 KDM6BO15054 1643 aa22.46■■□□□ 1.19
LAMB1-202ENST00000393559 KDM4FA0A1W2PPD8 638 aa22.45■■□□□ 1.18
LAMB1-202ENST00000393559 TSPOAP1O95153 1857 aa22.43■■□□□ 1.18
LAMB1-202ENST00000393559 ABCC2Q92887 1545 aa22.43■■□□□ 1.18
LAMB1-202ENST00000393559 ASXL2Q76L83 1435 aa22.42■■□□□ 1.18
LAMB1-202ENST00000393559 IQGAP2Q13576 1575 aa22.41■■□□□ 1.18
LAMB1-202ENST00000393559 PLB1Q6P1J6 1458 aa22.39■■□□□ 1.17
LAMB1-202ENST00000393559 UACAQ9BZF9 1416 aa22.39■■□□□ 1.17
LAMB1-202ENST00000393559 LOC105371045A0A1W2PR82 267 aa22.36■■□□□ 1.17
LAMB1-202ENST00000393559 DISP1Q96F81 1524 aa22.36■■□□□ 1.17
LAMB1-202ENST00000393559 EHMT2Q96KQ7 1210 aa22.34■■□□□ 1.17
LAMB1-202ENST00000393559 UHRF1BP1LA0JNW5 1464 aa22.34■■□□□ 1.17
LAMB1-202ENST00000393559 RAPGEF2Q9Y4G8 1499 aa22.34■■□□□ 1.17
LAMB1-202ENST00000393559 KIF21BO75037 1637 aa22.33■■□□□ 1.17
LAMB1-202ENST00000393559 PRXQ9BXM0 1461 aa22.33■■□□□ 1.16
LAMB1-202ENST00000393559 GOLGA3Q08378 1498 aa22.29■■□□□ 1.16
LAMB1-202ENST00000393559 GLI2P10070 1586 aa22.27■■□□□ 1.16
LAMB1-202ENST00000393559 UGGT2Q9NYU1 1516 aa22.26■■□□□ 1.15
LAMB1-202ENST00000393559 EPRSP07814 1512 aaKnown RBP22.25■■□□□ 1.15
LAMB1-202ENST00000393559 KDM5BQ9UGL1 1544 aa22.24■■□□□ 1.15
LAMB1-202ENST00000393559 COL17A1Q9UMD9 1497 aaPredicted RBP22.21■■□□□ 1.15
LAMB1-202ENST00000393559 KIAA0556O60303 1618 aa22.2■■□□□ 1.14
LAMB1-202ENST00000393559 PPRC1Q5VV67 1664 aaKnown RBP22.2■■□□□ 1.14
LAMB1-202ENST00000393559 KCNH8Q96L42 1107 aa22.19■■□□□ 1.14
LAMB1-202ENST00000393559 UBTFP17480 764 aaKnown RBP22.17■■□□□ 1.14
LAMB1-202ENST00000393559 ZCCHC11Q5TAX3 1644 aaKnown RBP22.17■■□□□ 1.14
LAMB1-202ENST00000393559 TEX14Q8IWB6 1497 aa22.16■■□□□ 1.14
LAMB1-202ENST00000393559 ADGRL1O94910 1474 aa22.15■■□□□ 1.14
LAMB1-202ENST00000393559 WDR7Q9Y4E6 1490 aa22.13■■□□□ 1.13
LAMB1-202ENST00000393559 MAP3K4Q9Y6R4 1608 aa22.12■■□□□ 1.13
LAMB1-202ENST00000393559 ARID3CA6NKF2 412 aa22.1■■□□□ 1.13
LAMB1-202ENST00000393559 P3H3Q8IVL6 736 aa22.09■■□□□ 1.13
LAMB1-202ENST00000393559 CD109Q6YHK3 1445 aa22.08■■□□□ 1.13
LAMB1-202ENST00000393559 ILDR1Q86SU0 546 aaPredicted RBP22.02■■□□□ 1.12
LAMB1-202ENST00000393559 CTTNBP2Q8WZ74 1663 aa22.01■■□□□ 1.11
LAMB1-202ENST00000393559 ABCA8O94911 1581 aa22.01■■□□□ 1.11
LAMB1-202ENST00000393559 MAGI3Q5TCQ9 1506 aa21.99■■□□□ 1.11
LAMB1-202ENST00000393559 CEP162Q5TB80 1403 aa21.98■■□□□ 1.11
LAMB1-202ENST00000393559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.94■■□□□ 1.1
LAMB1-202ENST00000393559 RANGAP1P46060 587 aaPredicted RBP21.94■■□□□ 1.1
LAMB1-202ENST00000393559 HNRNPUL2Q1KMD3 747 aaKnown RBP21.94■■□□□ 1.1
LAMB1-202ENST00000393559 CFAP43Q8NDM7 1665 aa21.91■■□□□ 1.1
LAMB1-202ENST00000393559 ATP10BO94823 1461 aa21.91■■□□□ 1.1
LAMB1-202ENST00000393559 CLIP1P30622 1438 aa21.91■■□□□ 1.1
LAMB1-202ENST00000393559 HECW2Q9P2P5 1572 aa21.88■■□□□ 1.09
LAMB1-202ENST00000393559 RAPGEF3O95398 923 aa21.85■■□□□ 1.09
LAMB1-202ENST00000393559 ARAP3Q8WWN8 1544 aa21.81■■□□□ 1.08
LAMB1-202ENST00000393559 ARHGAP35Q9NRY4 1499 aa21.8■■□□□ 1.08
LAMB1-202ENST00000393559 PHLDB1Q86UU1 1377 aa21.78■■□□□ 1.08
LAMB1-202ENST00000393559 ARID4BQ4LE39 1312 aaPredicted RBP21.77■■□□□ 1.07
LAMB1-202ENST00000393559 EFCAB5A4FU69 1503 aa21.76■■□□□ 1.07
LAMB1-202ENST00000393559 SAMD9Q5K651 1589 aa21.74■■□□□ 1.07
LAMB1-202ENST00000393559 PLEKHD1A6NEE1 506 aa21.74■■□□□ 1.07
LAMB1-202ENST00000393559 ABCA9Q8IUA7 1624 aa21.73■■□□□ 1.07
LAMB1-202ENST00000393559 RAPGEF6Q8TEU7 1601 aa21.73■■□□□ 1.07
LAMB1-202ENST00000393559 FHOD3Q2V2M9 1422 aa21.73■■□□□ 1.07
LAMB1-202ENST00000393559 NUP153P49790 1475 aaKnown RBP21.71■■□□□ 1.07
LAMB1-202ENST00000393559 NEO1Q92859 1461 aa21.71■■□□□ 1.07
LAMB1-202ENST00000393559 PTPRMP28827 1452 aa21.66■■□□□ 1.06
LAMB1-202ENST00000393559 VPS8Q8N3P4 1428 aa21.66■■□□□ 1.06
LAMB1-202ENST00000393559 PLPPR3Q6T4P5 718 aa21.62■■□□□ 1.05
LAMB1-202ENST00000393559 ATP1B4Q9UN42 357 aaPredicted RBP21.62■■□□□ 1.05
LAMB1-202ENST00000393559 DENND4BO75064 1496 aaPredicted RBP21.6■■□□□ 1.05
LAMB1-202ENST00000393559 AKNAQ7Z591 1439 aa21.6■■□□□ 1.05
LAMB1-202ENST00000393559 FRMPD1Q5SYB0 1578 aa21.58■■□□□ 1.05
LAMB1-202ENST00000393559 ADAMTSL3P82987 1691 aa21.58■■□□□ 1.05
LAMB1-202ENST00000393559 FANCAO15360 1455 aa21.58■■□□□ 1.04
LAMB1-202ENST00000393559 FMN1Q68DA7 1419 aa21.55■■□□□ 1.04
LAMB1-202ENST00000393559 FBXO41Q8TF61 875 aa21.54■■□□□ 1.04
LAMB1-202ENST00000393559 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.54■■□□□ 1.04
LAMB1-202ENST00000393559 MLECQ14165 292 aa21.53■■□□□ 1.04
LAMB1-202ENST00000393559 MADDQ8WXG6 1647 aa21.52■■□□□ 1.04
LAMB1-202ENST00000393559 BCORL1Q5H9F3 1711 aa21.52■■□□□ 1.03
LAMB1-202ENST00000393559 PCF11O94913 1555 aaKnown RBP21.51■■□□□ 1.03
LAMB1-202ENST00000393559 CDK13Q14004 1512 aaKnown RBP21.5■■□□□ 1.03
LAMB1-202ENST00000393559 ARHGEF40Q8TER5 1519 aa21.49■■□□□ 1.03
LAMB1-202ENST00000393559 POGZQ7Z3K3 1410 aa21.48■■□□□ 1.03
LAMB1-202ENST00000393559 YEATS2Q9ULM3 1422 aa21.48■■□□□ 1.03
LAMB1-202ENST00000393559 HSPA2P54652 639 aa21.48■■□□□ 1.03
LAMB1-202ENST00000393559 TTC37Q6PGP7 1564 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms