RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 WDR97A6NE52 1622 aa23.8■■□□□ 1.4
PTPA-207ENST00000393370 MAPKBP1O60336 1514 aa23.79■■□□□ 1.4
PTPA-207ENST00000393370 IL27Q8NEV9 243 aa23.79■■□□□ 1.4
PTPA-207ENST00000393370 RRBP1Q9P2E9 1410 aaKnown RBP23.77■■□□□ 1.4
PTPA-207ENST00000393370 RAPGEF2Q9Y4G8 1499 aa23.76■■□□□ 1.39
PTPA-207ENST00000393370 BAZ1BQ9UIG0 1483 aaKnown RBP23.75■■□□□ 1.39
PTPA-207ENST00000393370 PPP4R2Q9NY27 417 aa23.73■■□□□ 1.39
PTPA-207ENST00000393370 RTN4Q9NQC3 1192 aaKnown RBP23.73■■□□□ 1.39
PTPA-207ENST00000393370 HNRNPUQ00839 825 aaKnown RBP eCLIP23.72■■□□□ 1.39
PTPA-207ENST00000393370 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.71■■□□□ 1.39
PTPA-207ENST00000393370 UBE2Q2Q8WVN8 375 aa23.69■■□□□ 1.38
PTPA-207ENST00000393370 SIN3AQ96ST3 1273 aa23.69■■□□□ 1.38
PTPA-207ENST00000393370 RAB3GAP2Q9H2M9 1393 aa23.69■■□□□ 1.38
PTPA-207ENST00000393370 B4GALNT3Q6L9W6 998 aa23.66■■□□□ 1.38
PTPA-207ENST00000393370 CCNB3Q8WWL7 1395 aa23.65■■□□□ 1.38
PTPA-207ENST00000393370 RTL5Q5HYW3 569 aaPredicted RBP23.63■■□□□ 1.37
PTPA-207ENST00000393370 ARAP1Q96P48 1450 aa23.58■■□□□ 1.36
PTPA-207ENST00000393370 SYNJ1O43426 1573 aa23.56■■□□□ 1.36
PTPA-207ENST00000393370 IPO9Q96P70 1041 aaKnown RBP23.52■■□□□ 1.36
PTPA-207ENST00000393370 SMARCA4P51532 1647 aa23.48■■□□□ 1.35
PTPA-207ENST00000393370 ANP32AP39687 249 aaKnown RBP23.47■■□□□ 1.35
PTPA-207ENST00000393370 ZBTB47Q9UFB7 747 aaPredicted RBP23.46■■□□□ 1.35
PTPA-207ENST00000393370 SETD5Q9C0A6 1442 aa23.46■■□□□ 1.35
PTPA-207ENST00000393370 TIMELESSQ9UNS1 1208 aa23.45■■□□□ 1.34
PTPA-207ENST00000393370 WASHC2AQ641Q2 1341 aa23.43■■□□□ 1.34
PTPA-207ENST00000393370 CCDC184Q52MB2 194 aa23.32■■□□□ 1.32
PTPA-207ENST00000393370 C11orf95C9JLR9 678 aaPredicted RBP23.31■■□□□ 1.32
PTPA-207ENST00000393370 DNAJC5BQ9UF47 199 aa23.31■■□□□ 1.32
PTPA-207ENST00000393370 EIF5BO60841 1220 aaKnown RBP23.29■■□□□ 1.32
PTPA-207ENST00000393370 NEFMP07197 916 aa23.28■■□□□ 1.32
PTPA-207ENST00000393370 WASHC2CQ9Y4E1 1318 aa23.27■■□□□ 1.32
PTPA-207ENST00000393370 LAS1LQ9Y4W2 734 aaKnown RBP23.25■■□□□ 1.31
PTPA-207ENST00000393370 ATAD2BQ9ULI0 1458 aa23.25■■□□□ 1.31
PTPA-207ENST00000393370 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
PTPA-207ENST00000393370 BRPF3Q9ULD4 1205 aa23.24■■□□□ 1.31
PTPA-207ENST00000393370 PRXQ9BXM0 1461 aa23.24■■□□□ 1.31
PTPA-207ENST00000393370 FAM9BQ8IZU0 186 aa23.24■■□□□ 1.31
PTPA-207ENST00000393370 TONSLQ96HA7 1378 aa23.22■■□□□ 1.31
PTPA-207ENST00000393370 CC2D2AQ9P2K1 1620 aa23.22■■□□□ 1.31
PTPA-207ENST00000393370 ZBED9Q6R2W3 1325 aa23.22■■□□□ 1.31
PTPA-207ENST00000393370 USP35Q9P2H5 1018 aa23.21■■□□□ 1.31
PTPA-207ENST00000393370 FAM50AQ14320 339 aaKnown RBP23.2■■□□□ 1.3
PTPA-207ENST00000393370 NPM2Q86SE8 214 aaKnown RBP23.17■■□□□ 1.3
PTPA-207ENST00000393370 ARHGAP35Q9NRY4 1499 aa23.15■■□□□ 1.3
PTPA-207ENST00000393370 PHLDB1Q86UU1 1377 aa23.15■■□□□ 1.3
PTPA-207ENST00000393370 AKNAQ7Z591 1439 aa23.14■■□□□ 1.3
PTPA-207ENST00000393370 NCAPD3P42695 1498 aa23.14■■□□□ 1.29
PTPA-207ENST00000393370 MRS2Q9HD23 443 aa23.11■■□□□ 1.29
PTPA-207ENST00000393370 FHAD1B1AJZ9 1412 aa23.1■■□□□ 1.29
PTPA-207ENST00000393370 PEG3Q9GZU2 1588 aa23.09■■□□□ 1.29
PTPA-207ENST00000393370 PRKRIP1Q9H875 184 aaPredicted RBP23.07■■□□□ 1.28
PTPA-207ENST00000393370 TIAM1Q13009 1591 aa23.07■■□□□ 1.28
PTPA-207ENST00000393370 PKNOX2Q96KN3 472 aa23.07■■□□□ 1.28
PTPA-207ENST00000393370 HSPA5P11021 654 aaKnown RBP23.05■■□□□ 1.28
PTPA-207ENST00000393370 GSE1Q14687 1217 aa23.04■■□□□ 1.28
PTPA-207ENST00000393370 PPM1GO15355 546 aaPredicted RBP23.04■■□□□ 1.28
PTPA-207ENST00000393370 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
PTPA-207ENST00000393370 CNTLNQ9NXG0 1405 aa23.03■■□□□ 1.28
PTPA-207ENST00000393370 RNF123Q5XPI4 1314 aa23.03■■□□□ 1.28
PTPA-207ENST00000393370 LRRC9Q6ZRR7 1453 aa23.02■■□□□ 1.28
PTPA-207ENST00000393370 SMG6Q86US8 1419 aaKnown RBP23.02■■□□□ 1.28
PTPA-207ENST00000393370 NCOA2Q15596 1464 aa23■■□□□ 1.27
PTPA-207ENST00000393370 KDM5BQ9UGL1 1544 aa22.98■■□□□ 1.27
PTPA-207ENST00000393370 MAP3K1Q13233 1512 aa22.97■■□□□ 1.27
PTPA-207ENST00000393370 NUDCQ9Y266 331 aa22.97■■□□□ 1.27
PTPA-207ENST00000393370 PDE4AP27815 886 aa22.95■■□□□ 1.26
PTPA-207ENST00000393370 RSPH6AQ9H0K4 717 aa22.95■■□□□ 1.26
PTPA-207ENST00000393370 FRAT1Q92837 279 aaPredicted RBP22.94■■□□□ 1.26
PTPA-207ENST00000393370 EIF4G2P78344 907 aaKnown RBP eCLIP22.9■■□□□ 1.26
PTPA-207ENST00000393370 BACH2Q9BYV9 841 aa22.9■■□□□ 1.26
PTPA-207ENST00000393370 TCERG1O14776 1098 aaKnown RBP22.89■■□□□ 1.26
PTPA-207ENST00000393370 NFKBIBQ15653 356 aa22.89■■□□□ 1.25
PTPA-207ENST00000393370 CCDC18Q5T9S5 1454 aa22.87■■□□□ 1.25
PTPA-207ENST00000393370 UACAQ9BZF9 1416 aa22.86■■□□□ 1.25
PTPA-207ENST00000393370 SENP3-EIF4A1A0A087X0R7 540 aa22.86■■□□□ 1.25
PTPA-207ENST00000393370 HMGXB3Q12766 1538 aa22.86■■□□□ 1.25
PTPA-207ENST00000393370 BIVM-ERCC5R4GMW8 1640 aa22.86■■□□□ 1.25
PTPA-207ENST00000393370 CCDC7Q96M83 1385 aa22.85■■□□□ 1.25
PTPA-207ENST00000393370 FAM43AQ8N2R8 423 aa22.83■■□□□ 1.24
PTPA-207ENST00000393370 KIF27Q86VH2 1401 aa22.81■■□□□ 1.24
PTPA-207ENST00000393370 NCOA1Q15788 1441 aa22.81■■□□□ 1.24
PTPA-207ENST00000393370 AQRO60306 1485 aaKnown RBP eCLIP22.78■■□□□ 1.242e-7■■■■□ 20.4
PTPA-207ENST00000393370 DCAF11Q8TEB1 546 aa22.78■■□□□ 1.24
PTPA-207ENST00000393370 EXOC6Q8TAG9 804 aa22.77■■□□□ 1.24
PTPA-207ENST00000393370 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.76■■□□□ 1.23
PTPA-207ENST00000393370 MS4A1P11836 297 aa22.76■■□□□ 1.23
PTPA-207ENST00000393370 SLC4A3P48751 1232 aa22.76■■□□□ 1.23
PTPA-207ENST00000393370 DDRGK1Q96HY6 314 aa22.75■■□□□ 1.23
PTPA-207ENST00000393370 ATP1B4Q9UN42 357 aaPredicted RBP22.75■■□□□ 1.23
PTPA-207ENST00000393370 CNGB1Q14028 1251 aaPredicted RBP22.74■■□□□ 1.23
PTPA-207ENST00000393370 HFM1A2PYH4 1435 aa22.73■■□□□ 1.23
PTPA-207ENST00000393370 PTPRKQ15262 1439 aa22.72■■□□□ 1.23
PTPA-207ENST00000393370 CFAP43Q8NDM7 1665 aa22.72■■□□□ 1.23
PTPA-207ENST00000393370 ZMYND15Q9H091 742 aa22.71■■□□□ 1.23
PTPA-207ENST00000393370 GLIPR1L2Q4G1C9 344 aa22.7■■□□□ 1.22
PTPA-207ENST00000393370 PTPN23Q9H3S7 1636 aa22.7■■□□□ 1.22
PTPA-207ENST00000393370 RRP1P56182 461 aaKnown RBP22.69■■□□□ 1.22
PTPA-207ENST00000393370 KIF7Q2M1P5 1343 aa22.69■■□□□ 1.22
PTPA-207ENST00000393370 VSIG10Q8N0Z9 540 aa22.68■■□□□ 1.22
PTPA-207ENST00000393370 SKAP1Q86WV1 359 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms