RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 CTTNBP2Q8WZ74 1663 aa27.66■■■□□ 2.02
ERCC2-202ENST00000391942 OSCARQ8IYS5 282 aa27.6■■■□□ 2.01
ERCC2-202ENST00000391942 KIAA0586Q9BVV6 1533 aa27.58■■■□□ 2.01
ERCC2-202ENST00000391942 RANGAP1P46060 587 aaPredicted RBP27.57■■■□□ 2
ERCC2-202ENST00000391942 TNIKQ9UKE5 1360 aa27.57■■■□□ 2
ERCC2-202ENST00000391942 IQGAP2Q13576 1575 aa27.56■■■□□ 2
ERCC2-202ENST00000391942 CLASP1Q7Z460 1538 aa27.54■■■□□ 2
ERCC2-202ENST00000391942 JPH4Q96JJ6 628 aa27.44■■□□□ 1.98
ERCC2-202ENST00000391942 CEP162Q5TB80 1403 aa27.41■■□□□ 1.98
ERCC2-202ENST00000391942 SHROOM2Q13796 1616 aa27.4■■□□□ 1.98
ERCC2-202ENST00000391942 UGGT2Q9NYU1 1516 aa27.39■■□□□ 1.98
ERCC2-202ENST00000391942 CLIP1P30622 1438 aa27.36■■□□□ 1.97
ERCC2-202ENST00000391942 PRG4Q92954 1404 aaPredicted RBP27.35■■□□□ 1.97
ERCC2-202ENST00000391942 P3H3Q8IVL6 736 aa27.34■■□□□ 1.97
ERCC2-202ENST00000391942 SAMD9Q5K651 1589 aa27.31■■□□□ 1.96
ERCC2-202ENST00000391942 DISP1Q96F81 1524 aa27.31■■□□□ 1.96
ERCC2-202ENST00000391942 ERCC6L2Q5T890 1561 aa27.3■■□□□ 1.96
ERCC2-202ENST00000391942 ARHGAP35Q9NRY4 1499 aa27.3■■□□□ 1.96
ERCC2-202ENST00000391942 KIAA0556O60303 1618 aa27.29■■□□□ 1.96
ERCC2-202ENST00000391942 EFCAB5A4FU69 1503 aa27.29■■□□□ 1.96
ERCC2-202ENST00000391942 CARMIL2Q6F5E8 1435 aa27.27■■□□□ 1.96
ERCC2-202ENST00000391942 FHOD3Q2V2M9 1422 aa27.25■■□□□ 1.95
ERCC2-202ENST00000391942 TTBK1Q5TCY1 1321 aaPredicted RBP27.23■■□□□ 1.95
ERCC2-202ENST00000391942 ARAP1Q96P48 1450 aa27.2■■□□□ 1.94
ERCC2-202ENST00000391942 ARHGEF11O15085 1522 aa27.17■■□□□ 1.94
ERCC2-202ENST00000391942 RIMBP3CA6NJZ7 1639 aa27.12■■□□□ 1.93
ERCC2-202ENST00000391942 RIMBP3BA6NNM3 1639 aa27.12■■□□□ 1.93
ERCC2-202ENST00000391942 RIMBP3Q9UFD9 1639 aa27.12■■□□□ 1.93
ERCC2-202ENST00000391942 PTPRGP23470 1445 aa27.09■■□□□ 1.93
ERCC2-202ENST00000391942 FMN1Q68DA7 1419 aa27.03■■□□□ 1.92
ERCC2-202ENST00000391942 VPS8Q8N3P4 1428 aa27■■□□□ 1.91
ERCC2-202ENST00000391942 DNAJC5Q9H3Z4 198 aa27■■□□□ 1.91
ERCC2-202ENST00000391942 PLB1Q6P1J6 1458 aa26.99■■□□□ 1.91
ERCC2-202ENST00000391942 PCF11O94913 1555 aaKnown RBP26.97■■□□□ 1.91
ERCC2-202ENST00000391942 ATP1B4Q9UN42 357 aaPredicted RBP26.96■■□□□ 1.91
ERCC2-202ENST00000391942 RAPGEF6Q8TEU7 1601 aa26.95■■□□□ 1.9
ERCC2-202ENST00000391942 CYB5RLQ6IPT4 315 aa26.93■■□□□ 1.9
ERCC2-202ENST00000391942 ABCA8O94911 1581 aa26.93■■□□□ 1.9
ERCC2-202ENST00000391942 UACAQ9BZF9 1416 aa26.91■■□□□ 1.9
ERCC2-202ENST00000391942 CASKIN1Q8WXD9 1431 aa26.91■■□□□ 1.9
ERCC2-202ENST00000391942 ARID3CA6NKF2 412 aa26.89■■□□□ 1.9
ERCC2-202ENST00000391942 FYCO1Q9BQS8 1478 aa26.88■■□□□ 1.89
ERCC2-202ENST00000391942 HECW1Q76N89 1606 aa26.86■■□□□ 1.89
ERCC2-202ENST00000391942 ABCC2Q92887 1545 aa26.86■■□□□ 1.89
ERCC2-202ENST00000391942 ADCY10Q96PN6 1610 aa26.85■■□□□ 1.89
ERCC2-202ENST00000391942 NUP153P49790 1475 aaKnown RBP26.85■■□□□ 1.89
ERCC2-202ENST00000391942 LRRIQ1Q96JM4 1722 aa26.82■■□□□ 1.88
ERCC2-202ENST00000391942 UHRF1BP1LA0JNW5 1464 aa26.81■■□□□ 1.88
ERCC2-202ENST00000391942 CDK13Q14004 1512 aaKnown RBP26.78■■□□□ 1.88
ERCC2-202ENST00000391942 EPRSP07814 1512 aaKnown RBP26.77■■□□□ 1.88
ERCC2-202ENST00000391942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.75■■□□□ 1.87
ERCC2-202ENST00000391942 HNRNPUL2Q1KMD3 747 aaKnown RBP26.75■■□□□ 1.87
ERCC2-202ENST00000391942 ATP10BO94823 1461 aa26.73■■□□□ 1.87
ERCC2-202ENST00000391942 APLP2Q06481 763 aa26.73■■□□□ 1.87
ERCC2-202ENST00000391942 CCDC18Q5T9S5 1454 aa26.72■■□□□ 1.87
ERCC2-202ENST00000391942 ZCCHC11Q5TAX3 1644 aaKnown RBP26.72■■□□□ 1.87
ERCC2-202ENST00000391942 KDM5BQ9UGL1 1544 aa26.7■■□□□ 1.87
ERCC2-202ENST00000391942 TIAM1Q13009 1591 aa26.69■■□□□ 1.86
ERCC2-202ENST00000391942 CFAP43Q8NDM7 1665 aa26.69■■□□□ 1.86
ERCC2-202ENST00000391942 NPM1P06748 294 aaKnown RBP eCLIP26.68■■□□□ 1.86
ERCC2-202ENST00000391942 PPARGC1BQ86YN6 1023 aaKnown RBP26.63■■□□□ 1.85
ERCC2-202ENST00000391942 MAP3K1Q13233 1512 aa26.62■■□□□ 1.85
ERCC2-202ENST00000391942 KANK4Q5T7N3 995 aaPredicted RBP26.6■■□□□ 1.85
ERCC2-202ENST00000391942 MAGI3Q5TCQ9 1506 aa26.6■■□□□ 1.85
ERCC2-202ENST00000391942 CDK11AQ9UQ88 783 aaPredicted RBP26.57■■□□□ 1.84
ERCC2-202ENST00000391942 PLEKHD1A6NEE1 506 aa26.56■■□□□ 1.84
ERCC2-202ENST00000391942 LRRC9Q6ZRR7 1453 aa26.56■■□□□ 1.84
ERCC2-202ENST00000391942 MTUS2Q5JR59 1369 aa26.56■■□□□ 1.84
ERCC2-202ENST00000391942 ASXL2Q76L83 1435 aa26.54■■□□□ 1.84
ERCC2-202ENST00000391942 EHBP1L1Q8N3D4 1523 aa26.51■■□□□ 1.83
ERCC2-202ENST00000391942 TROQ12816 1431 aaPredicted RBP26.5■■□□□ 1.83
ERCC2-202ENST00000391942 WDR7Q9Y4E6 1490 aa26.49■■□□□ 1.83
ERCC2-202ENST00000391942 MAPKBP1O60336 1514 aa26.49■■□□□ 1.83
ERCC2-202ENST00000391942 KCNH8Q96L42 1107 aa26.49■■□□□ 1.83
ERCC2-202ENST00000391942 KIF14Q15058 1648 aa26.45■■□□□ 1.82
ERCC2-202ENST00000391942 SUPT6HQ7KZ85 1726 aaKnown RBP26.41■■□□□ 1.82
ERCC2-202ENST00000391942 NCOA2Q15596 1464 aa26.38■■□□□ 1.81
ERCC2-202ENST00000391942 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.34■■□□□ 1.81
ERCC2-202ENST00000391942 TTC37Q6PGP7 1564 aa26.33■■□□□ 1.81
ERCC2-202ENST00000391942 ABCC10Q5T3U5 1492 aa26.31■■□□□ 1.8
ERCC2-202ENST00000391942 DIP2BQ9P265 1576 aa26.3■■□□□ 1.8
ERCC2-202ENST00000391942 PHLDB1Q86UU1 1377 aa26.29■■□□□ 1.8
ERCC2-202ENST00000391942 FAM69CQ0P6D2 419 aa26.28■■□□□ 1.8
ERCC2-202ENST00000391942 ABCA9Q8IUA7 1624 aa26.27■■□□□ 1.8
ERCC2-202ENST00000391942 CCNB3Q8WWL7 1395 aa26.27■■□□□ 1.8
ERCC2-202ENST00000391942 KIF13AQ9H1H9 1805 aa26.24■■□□□ 1.79
ERCC2-202ENST00000391942 GLI2P10070 1586 aa26.23■■□□□ 1.79
ERCC2-202ENST00000391942 CDC42BPAQ5VT25 1732 aa26.23■■□□□ 1.79
ERCC2-202ENST00000391942 MYO5CQ9NQX4 1742 aa26.23■■□□□ 1.79
ERCC2-202ENST00000391942 GPATCH8Q9UKJ3 1502 aaKnown RBP26.22■■□□□ 1.79
ERCC2-202ENST00000391942 MYOM3Q5VTT5 1437 aa26.21■■□□□ 1.79
ERCC2-202ENST00000391942 ITSN2Q9NZM3 1697 aa26.2■■□□□ 1.78
ERCC2-202ENST00000391942 TRHP20396 242 aaPredicted RBP26.19■■□□□ 1.78
ERCC2-202ENST00000391942 CD109Q6YHK3 1445 aa26.19■■□□□ 1.78
ERCC2-202ENST00000391942 PREX2Q70Z35 1606 aa26.19■■□□□ 1.78
ERCC2-202ENST00000391942 MAP3K4Q9Y6R4 1608 aa26.19■■□□□ 1.78
ERCC2-202ENST00000391942 CDC42BPBQ9Y5S2 1711 aa26.18■■□□□ 1.78
ERCC2-202ENST00000391942 PLCH2O75038 1416 aa26.16■■□□□ 1.78
ERCC2-202ENST00000391942 CFDP1Q9UEE9 299 aaPredicted RBP26.16■■□□□ 1.78
ERCC2-202ENST00000391942 ARHGAP5Q13017 1502 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms