RNA–Protein interactions for RNA: ENST00000387416.2

MT-TS1-201, Transcript of mitochondrially encoded tRNA serine 1 (UCN), humanhuman

BASIC

Gene MT-TS1, Length 69 nt, Biotype Mt tRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-TS1-201ENST00000387416 PRG4Q92954 1404 aaPredicted RBP14.35□□□□□ -0.11
MT-TS1-201ENST00000387416 RUSC2Q8N2Y8 1516 aa14.33□□□□□ -0.12
MT-TS1-201ENST00000387416 RAPGEF2Q9Y4G8 1499 aa14.32□□□□□ -0.12
MT-TS1-201ENST00000387416 ERCC6L2Q5T890 1561 aa14.29□□□□□ -0.12
MT-TS1-201ENST00000387416 EEA1Q15075 1411 aa14.26□□□□□ -0.13
MT-TS1-201ENST00000387416 CARMIL2Q6F5E8 1435 aa14.26□□□□□ -0.13
MT-TS1-201ENST00000387416 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
MT-TS1-201ENST00000387416 CSRNP3Q8WYN3 585 aa14.24□□□□□ -0.13
MT-TS1-201ENST00000387416 IQGAP2Q13576 1575 aa14.24□□□□□ -0.13
MT-TS1-201ENST00000387416 PRXQ9BXM0 1461 aa14.23□□□□□ -0.13
MT-TS1-201ENST00000387416 NPM1P06748 294 aaKnown RBP eCLIP14.21□□□□□ -0.13
MT-TS1-201ENST00000387416 PTPRGP23470 1445 aa14.2□□□□□ -0.14
MT-TS1-201ENST00000387416 TNIKQ9UKE5 1360 aa14.2□□□□□ -0.14
MT-TS1-201ENST00000387416 CHIC1Q5VXU3 224 aa14.19□□□□□ -0.14
MT-TS1-201ENST00000387416 UGGT2Q9NYU1 1516 aa14.17□□□□□ -0.14
MT-TS1-201ENST00000387416 FAM9AQ8IZU1 332 aaPredicted RBP14.15□□□□□ -0.14
MT-TS1-201ENST00000387416 GOLGA3Q08378 1498 aa14.14□□□□□ -0.15
MT-TS1-201ENST00000387416 CTTNBP2Q8WZ74 1663 aa14.14□□□□□ -0.15
MT-TS1-201ENST00000387416 DISP1Q96F81 1524 aa14.13□□□□□ -0.15
MT-TS1-201ENST00000387416 UHRF1BP1LA0JNW5 1464 aa14.09□□□□□ -0.15
MT-TS1-201ENST00000387416 ADCY10Q96PN6 1610 aa14.08□□□□□ -0.15
MT-TS1-201ENST00000387416 UACAQ9BZF9 1416 aa14.08□□□□□ -0.15
MT-TS1-201ENST00000387416 MAPKBP1O60336 1514 aa14.08□□□□□ -0.16
MT-TS1-201ENST00000387416 TTBK1Q5TCY1 1321 aaPredicted RBP14.08□□□□□ -0.16
MT-TS1-201ENST00000387416 KIAA0556O60303 1618 aa14.08□□□□□ -0.16
MT-TS1-201ENST00000387416 ABCC2Q92887 1545 aa14.06□□□□□ -0.16
MT-TS1-201ENST00000387416 ABCC10Q5T3U5 1492 aa14.04□□□□□ -0.16
MT-TS1-201ENST00000387416 KIF21BO75037 1637 aa14.04□□□□□ -0.16
MT-TS1-201ENST00000387416 FAM69CQ0P6D2 419 aa14.02□□□□□ -0.17
MT-TS1-201ENST00000387416 PLB1Q6P1J6 1458 aa14.01□□□□□ -0.17
MT-TS1-201ENST00000387416 KDM5BQ9UGL1 1544 aa14□□□□□ -0.17
MT-TS1-201ENST00000387416 KIF13AQ9H1H9 1805 aa13.98□□□□□ -0.17
MT-TS1-201ENST00000387416 UBTFP17480 764 aaKnown RBP13.97□□□□□ -0.17
MT-TS1-201ENST00000387416 ASXL2Q76L83 1435 aa13.97□□□□□ -0.17
MT-TS1-201ENST00000387416 SAMD9Q5K651 1589 aa13.96□□□□□ -0.18
MT-TS1-201ENST00000387416 DIP2BQ9P265 1576 aa13.96□□□□□ -0.18
MT-TS1-201ENST00000387416 P3H3Q8IVL6 736 aa13.95□□□□□ -0.18
MT-TS1-201ENST00000387416 ABCA8O94911 1581 aa13.95□□□□□ -0.18
MT-TS1-201ENST00000387416 EFCAB5A4FU69 1503 aa13.92□□□□□ -0.18
MT-TS1-201ENST00000387416 GLI2P10070 1586 aa13.92□□□□□ -0.18
MT-TS1-201ENST00000387416 ZCCHC11Q5TAX3 1644 aaKnown RBP13.91□□□□□ -0.18
MT-TS1-201ENST00000387416 RANGAP1P46060 587 aaPredicted RBP13.89□□□□□ -0.19
MT-TS1-201ENST00000387416 WDR7Q9Y4E6 1490 aa13.88□□□□□ -0.19
MT-TS1-201ENST00000387416 EPRSP07814 1512 aaKnown RBP13.88□□□□□ -0.19
MT-TS1-201ENST00000387416 FHOD3Q2V2M9 1422 aa13.85□□□□□ -0.19
MT-TS1-201ENST00000387416 RAPGEF6Q8TEU7 1601 aa13.85□□□□□ -0.19
MT-TS1-201ENST00000387416 ATP10BO94823 1461 aa13.85□□□□□ -0.19
MT-TS1-201ENST00000387416 EHMT2Q96KQ7 1210 aa13.84□□□□□ -0.19
MT-TS1-201ENST00000387416 FMN1Q68DA7 1419 aa13.83□□□□□ -0.2
MT-TS1-201ENST00000387416 KCNH8Q96L42 1107 aa13.83□□□□□ -0.2
MT-TS1-201ENST00000387416 TSPOAP1O95153 1857 aa13.82□□□□□ -0.2
MT-TS1-201ENST00000387416 TEX14Q8IWB6 1497 aa13.82□□□□□ -0.2
MT-TS1-201ENST00000387416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.82□□□□□ -0.2
MT-TS1-201ENST00000387416 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
MT-TS1-201ENST00000387416 MAP3K4Q9Y6R4 1608 aa13.8□□□□□ -0.2
MT-TS1-201ENST00000387416 PLEKHD1A6NEE1 506 aa13.8□□□□□ -0.2
MT-TS1-201ENST00000387416 NUP153P49790 1475 aaKnown RBP13.8□□□□□ -0.2
MT-TS1-201ENST00000387416 ARID3CA6NKF2 412 aa13.79□□□□□ -0.2
MT-TS1-201ENST00000387416 CD109Q6YHK3 1445 aa13.79□□□□□ -0.2
MT-TS1-201ENST00000387416 ARHGAP35Q9NRY4 1499 aa13.79□□□□□ -0.2
MT-TS1-201ENST00000387416 KDM6BO15054 1643 aa13.78□□□□□ -0.2
MT-TS1-201ENST00000387416 CFAP43Q8NDM7 1665 aa13.78□□□□□ -0.2
MT-TS1-201ENST00000387416 MAGI3Q5TCQ9 1506 aa13.77□□□□□ -0.21
MT-TS1-201ENST00000387416 CDK11AQ9UQ88 783 aaPredicted RBP13.77□□□□□ -0.21
MT-TS1-201ENST00000387416 PHLDB1Q86UU1 1377 aa13.76□□□□□ -0.21
MT-TS1-201ENST00000387416 PPRC1Q5VV67 1664 aaKnown RBP13.75□□□□□ -0.21
MT-TS1-201ENST00000387416 ATP1B4Q9UN42 357 aaPredicted RBP13.72□□□□□ -0.21
MT-TS1-201ENST00000387416 HECW1Q76N89 1606 aa13.72□□□□□ -0.21
MT-TS1-201ENST00000387416 ABCA9Q8IUA7 1624 aa13.72□□□□□ -0.21
MT-TS1-201ENST00000387416 CLIP1P30622 1438 aa13.71□□□□□ -0.22
MT-TS1-201ENST00000387416 CASKIN1Q8WXD9 1431 aa13.68□□□□□ -0.22
MT-TS1-201ENST00000387416 NEO1Q92859 1461 aa13.67□□□□□ -0.22
MT-TS1-201ENST00000387416 ARAP3Q8WWN8 1544 aa13.66□□□□□ -0.22
MT-TS1-201ENST00000387416 AEBP2Q6ZN18 517 aaPredicted RBP13.66□□□□□ -0.22
MT-TS1-201ENST00000387416 COL17A1Q9UMD9 1497 aaPredicted RBP13.66□□□□□ -0.22
MT-TS1-201ENST00000387416 CDK13Q14004 1512 aaKnown RBP13.65□□□□□ -0.22
MT-TS1-201ENST00000387416 CCDC18Q5T9S5 1454 aa13.65□□□□□ -0.22
MT-TS1-201ENST00000387416 FYCO1Q9BQS8 1478 aa13.63□□□□□ -0.23
MT-TS1-201ENST00000387416 TROQ12816 1431 aaPredicted RBP13.63□□□□□ -0.23
MT-TS1-201ENST00000387416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.61□□□□□ -0.23
MT-TS1-201ENST00000387416 CEP162Q5TB80 1403 aa13.6□□□□□ -0.23
MT-TS1-201ENST00000387416 EFCAB2Q5VUJ9 269 aa13.6□□□□□ -0.23
MT-TS1-201ENST00000387416 CFAP74Q9C0B2 1584 aa13.59□□□□□ -0.23
MT-TS1-201ENST00000387416 PLCH2O75038 1416 aa13.59□□□□□ -0.23
MT-TS1-201ENST00000387416 PCF11O94913 1555 aaKnown RBP13.58□□□□□ -0.23
MT-TS1-201ENST00000387416 AKNAQ7Z591 1439 aa13.58□□□□□ -0.24
MT-TS1-201ENST00000387416 FANCAO15360 1455 aa13.58□□□□□ -0.24
MT-TS1-201ENST00000387416 KIF14Q15058 1648 aa13.57□□□□□ -0.24
MT-TS1-201ENST00000387416 LOC105371045A0A1W2PR82 267 aa13.56□□□□□ -0.24
MT-TS1-201ENST00000387416 TTC37Q6PGP7 1564 aa13.56□□□□□ -0.24
MT-TS1-201ENST00000387416 DENND4BO75064 1496 aaPredicted RBP13.55□□□□□ -0.24
MT-TS1-201ENST00000387416 RAPGEF3O95398 923 aa13.55□□□□□ -0.24
MT-TS1-201ENST00000387416 LRRIQ1Q96JM4 1722 aa13.54□□□□□ -0.24
MT-TS1-201ENST00000387416 MYO5CQ9NQX4 1742 aa13.53□□□□□ -0.24
MT-TS1-201ENST00000387416 ADGRL1O94910 1474 aa13.51□□□□□ -0.25
MT-TS1-201ENST00000387416 KDM4FA0A1W2PPD8 638 aa13.51□□□□□ -0.25
MT-TS1-201ENST00000387416 MAGI2Q86UL8 1455 aa13.5□□□□□ -0.25
MT-TS1-201ENST00000387416 SCAPERQ9BY12 1400 aa13.5□□□□□ -0.25
MT-TS1-201ENST00000387416 MTUS2Q5JR59 1369 aa13.5□□□□□ -0.25
MT-TS1-201ENST00000387416 ARHGAP5Q13017 1502 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms