RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 ANP32EQ9BTT0 268 aa26.32■■□□□ 1.8
CSPG5-202ENST00000383738 BCL11AQ9H165 835 aa26.31■■□□□ 1.8
CSPG5-202ENST00000383738 DDX10Q13206 875 aaKnown RBP26.3■■□□□ 1.8
CSPG5-202ENST00000383738 EIF4G1Q04637 1599 aaKnown RBP26.29■■□□□ 1.8
CSPG5-202ENST00000383738 PLEKHD1A6NEE1 506 aa26.29■■□□□ 1.8
CSPG5-202ENST00000383738 IRX6P78412 446 aaPredicted RBP26.29■■□□□ 1.8
CSPG5-202ENST00000383738 TSPY4P0CV99 314 aa26.28■■□□□ 1.8
CSPG5-202ENST00000383738 TSPY10P0CW01 314 aa26.28■■□□□ 1.8
CSPG5-202ENST00000383738 PDS5BQ9NTI5 1447 aa26.28■■□□□ 1.8
CSPG5-202ENST00000383738 KDM2AQ9Y2K7 1162 aa26.27■■□□□ 1.8
CSPG5-202ENST00000383738 SUPT16HQ9Y5B9 1047 aaKnown RBP26.25■■□□□ 1.79
CSPG5-202ENST00000383738 RAPGEF2Q9Y4G8 1499 aa26.2■■□□□ 1.79
CSPG5-202ENST00000383738 RTL5Q5HYW3 569 aaPredicted RBP26.2■■□□□ 1.78
CSPG5-202ENST00000383738 CFDP1Q9UEE9 299 aaPredicted RBP26.19■■□□□ 1.78
CSPG5-202ENST00000383738 TONSLQ96HA7 1378 aa26.18■■□□□ 1.78
CSPG5-202ENST00000383738 ANP32CO43423 234 aa26.16■■□□□ 1.78
CSPG5-202ENST00000383738 SIN3AQ96ST3 1273 aa26.16■■□□□ 1.78
CSPG5-202ENST00000383738 NBR1Q14596 966 aa26.14■■□□□ 1.77
CSPG5-202ENST00000383738 FANCD2Q9BXW9 1451 aa26.14■■□□□ 1.77
CSPG5-202ENST00000383738 NESP48681 1621 aa26.1■■□□□ 1.77
CSPG5-202ENST00000383738 RGL3Q3MIN7 710 aa26.09■■□□□ 1.77
CSPG5-202ENST00000383738 RAD54L2Q9Y4B4 1467 aa26.07■■□□□ 1.76
CSPG5-202ENST00000383738 NCAPD3P42695 1498 aa26.02■■□□□ 1.76
CSPG5-202ENST00000383738 FHOD3Q2V2M9 1422 aa26.01■■□□□ 1.75
CSPG5-202ENST00000383738 SENP3-EIF4A1A0A087X0R7 540 aa25.99■■□□□ 1.75
CSPG5-202ENST00000383738 ESF1Q9H501 851 aaKnown RBP25.98■■□□□ 1.75
CSPG5-202ENST00000383738 VPS8Q8N3P4 1428 aa25.98■■□□□ 1.75
CSPG5-202ENST00000383738 HNRNPUQ00839 825 aaKnown RBP eCLIP25.98■■□□□ 1.75
CSPG5-202ENST00000383738 TSHZ2Q9NRE2 1034 aa25.97■■□□□ 1.75
CSPG5-202ENST00000383738 STAG3Q9UJ98 1225 aa25.97■■□□□ 1.75
CSPG5-202ENST00000383738 BICRAQ9NZM4 1560 aa25.96■■□□□ 1.75
CSPG5-202ENST00000383738 FOXD1Q16676 465 aa25.95■■□□□ 1.74
CSPG5-202ENST00000383738 NPM2Q86SE8 214 aaKnown RBP25.93■■□□□ 1.74
CSPG5-202ENST00000383738 DAXXQ9UER7 740 aaPredicted RBP25.92■■□□□ 1.74
CSPG5-202ENST00000383738 CCNB3Q8WWL7 1395 aa25.91■■□□□ 1.74
CSPG5-202ENST00000383738 JPH4Q96JJ6 628 aa25.9■■□□□ 1.74
CSPG5-202ENST00000383738 FGD5Q6ZNL6 1462 aa25.89■■□□□ 1.74
CSPG5-202ENST00000383738 IGF1RP08069 1367 aa25.89■■□□□ 1.73
CSPG5-202ENST00000383738 SALL2Q9Y467 1007 aaPredicted RBP25.89■■□□□ 1.73
CSPG5-202ENST00000383738 CLSPNQ9HAW4 1339 aa25.85■■□□□ 1.73
CSPG5-202ENST00000383738 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.73
CSPG5-202ENST00000383738 EIF5BO60841 1220 aaKnown RBP25.84■■□□□ 1.73
CSPG5-202ENST00000383738 FHAD1B1AJZ9 1412 aa25.84■■□□□ 1.73
CSPG5-202ENST00000383738 CC2D2AQ9P2K1 1620 aa25.82■■□□□ 1.72
CSPG5-202ENST00000383738 FAM9BQ8IZU0 186 aa25.79■■□□□ 1.72
CSPG5-202ENST00000383738 RBM19Q9Y4C8 960 aaKnown RBP25.78■■□□□ 1.72
CSPG5-202ENST00000383738 RTN4Q9NQC3 1192 aaKnown RBP25.74■■□□□ 1.71
CSPG5-202ENST00000383738 MLECQ14165 292 aa25.71■■□□□ 1.71
CSPG5-202ENST00000383738 PLEKHG5O94827 1062 aa25.71■■□□□ 1.71
CSPG5-202ENST00000383738 SYNJ1O43426 1573 aa25.7■■□□□ 1.7
CSPG5-202ENST00000383738 ARID4BQ4LE39 1312 aaPredicted RBP25.68■■□□□ 1.7
CSPG5-202ENST00000383738 CFTRP13569 1480 aa25.67■■□□□ 1.7
CSPG5-202ENST00000383738 TRHP20396 242 aaPredicted RBP25.67■■□□□ 1.7
CSPG5-202ENST00000383738 HNRNPMP52272 730 aaKnown RBP eCLIP25.66■■□□□ 1.7
CSPG5-202ENST00000383738 GAPVD1Q14C86 1478 aa25.64■■□□□ 1.7
CSPG5-202ENST00000383738 ANP32AP39687 249 aaKnown RBP25.64■■□□□ 1.69
CSPG5-202ENST00000383738 SLC24A1O60721 1099 aa25.61■■□□□ 1.69
CSPG5-202ENST00000383738 EIF4G2P78344 907 aaKnown RBP eCLIP25.6■■□□□ 1.69
CSPG5-202ENST00000383738 CYB5RLQ6IPT4 315 aa25.6■■□□□ 1.69
CSPG5-202ENST00000383738 CARMIL2Q6F5E8 1435 aa25.6■■□□□ 1.69
CSPG5-202ENST00000383738 GGT6Q6P531 493 aa25.59■■□□□ 1.69
CSPG5-202ENST00000383738 FMN1Q68DA7 1419 aa25.57■■□□□ 1.68
CSPG5-202ENST00000383738 RAB3GAP2Q9H2M9 1393 aa25.55■■□□□ 1.68
CSPG5-202ENST00000383738 ARHGAP35Q9NRY4 1499 aa25.55■■□□□ 1.68
CSPG5-202ENST00000383738 PKD2Q13563 968 aa25.52■■□□□ 1.68
CSPG5-202ENST00000383738 ZNF644Q9H582 1327 aaPredicted RBP25.51■■□□□ 1.67
CSPG5-202ENST00000383738 DCAF11Q8TEB1 546 aa25.51■■□□□ 1.67
CSPG5-202ENST00000383738 UNC13AQ9UPW8 1703 aa25.51■■□□□ 1.67
CSPG5-202ENST00000383738 CUX1P39880 1505 aa25.5■■□□□ 1.67
CSPG5-202ENST00000383738 MRS2Q9HD23 443 aa25.49■■□□□ 1.67
CSPG5-202ENST00000383738 CARD11Q9BXL7 1154 aa25.48■■□□□ 1.67
CSPG5-202ENST00000383738 B4GALNT3Q6L9W6 998 aa25.48■■□□□ 1.67
CSPG5-202ENST00000383738 SETD5Q9C0A6 1442 aa25.46■■□□□ 1.67
CSPG5-202ENST00000383738 TMC1Q8TDI8 760 aa25.45■■□□□ 1.67
CSPG5-202ENST00000383738 ZBTB47Q9UFB7 747 aaPredicted RBP25.45■■□□□ 1.66
CSPG5-202ENST00000383738 CCDC136Q96JN2 1154 aa25.45■■□□□ 1.66
CSPG5-202ENST00000383738 DEKP35659 375 aaKnown RBP25.44■■□□□ 1.66
CSPG5-202ENST00000383738 PPP1R15AO75807 674 aaPredicted RBP25.42■■□□□ 1.66
CSPG5-202ENST00000383738 MPHOSPH9Q99550 1183 aa25.41■■□□□ 1.66
CSPG5-202ENST00000383738 POLA1P09884 1462 aaPredicted RBP25.41■■□□□ 1.66
CSPG5-202ENST00000383738 PTPRGP23470 1445 aa25.39■■□□□ 1.66
CSPG5-202ENST00000383738 TOPBP1Q92547 1522 aa25.38■■□□□ 1.65
CSPG5-202ENST00000383738 SAFB2Q14151 953 aaKnown RBP eCLIP25.37■■□□□ 1.65
CSPG5-202ENST00000383738 EFCAB2Q5VUJ9 269 aa25.37■■□□□ 1.65
CSPG5-202ENST00000383738 ARXQ96QS3 562 aa25.37■■□□□ 1.65
CSPG5-202ENST00000383738 HMGXB3Q12766 1538 aa25.36■■□□□ 1.65
CSPG5-202ENST00000383738 ARAP1Q96P48 1450 aa25.36■■□□□ 1.65
CSPG5-202ENST00000383738 NUP155O75694 1391 aa25.35■■□□□ 1.65
CSPG5-202ENST00000383738 OSCARQ8IYS5 282 aa25.35■■□□□ 1.65
CSPG5-202ENST00000383738 KIF3BO15066 747 aa25.34■■□□□ 1.65
CSPG5-202ENST00000383738 NUTM2DQ5VT03 806 aaPredicted RBP25.33■■□□□ 1.65
CSPG5-202ENST00000383738 LAS1LQ9Y4W2 734 aaKnown RBP25.3■■□□□ 1.64
CSPG5-202ENST00000383738 KIF21BO75037 1637 aa25.29■■□□□ 1.64
CSPG5-202ENST00000383738 TNNT2P45379 298 aaPredicted RBP25.28■■□□□ 1.64
CSPG5-202ENST00000383738 PHLDB1Q86UU1 1377 aa25.27■■□□□ 1.64
CSPG5-202ENST00000383738 L3MBTL2Q969R5 705 aa25.26■■□□□ 1.63
CSPG5-202ENST00000383738 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.25■■□□□ 1.63
CSPG5-202ENST00000383738 CANXP27824 592 aaKnown RBP25.24■■□□□ 1.63
CSPG5-202ENST00000383738 HSPA5P11021 654 aaKnown RBP25.21■■□□□ 1.63
CSPG5-202ENST00000383738 PRXQ9BXM0 1461 aa25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms