RNA–Protein interactions for RNA: ENST00000382227.7

TMEM41A-202, Transcript of transmembrane protein 41A, humanhuman

TSL 4

Gene TMEM41A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-202ENST00000382227 IGF1RP08069 1367 aa32.81■■■□□ 2.84
TMEM41A-202ENST00000382227 CUL7Q14999 1698 aa32.72■■■□□ 2.83
TMEM41A-202ENST00000382227 KIAA0586Q9BVV6 1533 aa32.7■■■□□ 2.83
TMEM41A-202ENST00000382227 CARMIL1Q5VZK9 1371 aa32.59■■■□□ 2.81
TMEM41A-202ENST00000382227 NPM1P06748 294 aaKnown RBP eCLIP32.55■■■□□ 2.8
TMEM41A-202ENST00000382227 KIF13AQ9H1H9 1805 aa32.54■■■□□ 2.8
TMEM41A-202ENST00000382227 ADCY10Q96PN6 1610 aa32.51■■■□□ 2.79
TMEM41A-202ENST00000382227 MAPKBP1O60336 1514 aa32.48■■■□□ 2.79
TMEM41A-202ENST00000382227 ABCC10Q5T3U5 1492 aa32.47■■■□□ 2.79
TMEM41A-202ENST00000382227 FAM69CQ0P6D2 419 aa32.44■■■□□ 2.78
TMEM41A-202ENST00000382227 AEBP2Q6ZN18 517 aaPredicted RBP32.41■■■□□ 2.78
TMEM41A-202ENST00000382227 PTPRGP23470 1445 aa32.4■■■□□ 2.78
TMEM41A-202ENST00000382227 CARMIL2Q6F5E8 1435 aa32.38■■■□□ 2.77
TMEM41A-202ENST00000382227 IQGAP2Q13576 1575 aa32.37■■■□□ 2.77
TMEM41A-202ENST00000382227 DIP2BQ9P265 1576 aa32.36■■■□□ 2.77
TMEM41A-202ENST00000382227 TNIKQ9UKE5 1360 aa32.34■■■□□ 2.77
TMEM41A-202ENST00000382227 TTBK1Q5TCY1 1321 aaPredicted RBP32.31■■■□□ 2.76
TMEM41A-202ENST00000382227 RAPGEF2Q9Y4G8 1499 aa32.29■■■□□ 2.76
TMEM41A-202ENST00000382227 DISP1Q96F81 1524 aa32.23■■■□□ 2.75
TMEM41A-202ENST00000382227 ABCC2Q92887 1545 aa32.22■■■□□ 2.75
TMEM41A-202ENST00000382227 UGGT2Q9NYU1 1516 aa32.17■■■□□ 2.74
TMEM41A-202ENST00000382227 UHRF1BP1LA0JNW5 1464 aa32.16■■■□□ 2.74
TMEM41A-202ENST00000382227 UACAQ9BZF9 1416 aa32.16■■■□□ 2.74
TMEM41A-202ENST00000382227 ASXL2Q76L83 1435 aa32.11■■■□□ 2.73
TMEM41A-202ENST00000382227 PLB1Q6P1J6 1458 aa32.1■■■□□ 2.73
TMEM41A-202ENST00000382227 TSPOAP1O95153 1857 aa32.09■■■□□ 2.73
TMEM41A-202ENST00000382227 KDM6BO15054 1643 aa32.08■■■□□ 2.73
TMEM41A-202ENST00000382227 KIAA0556O60303 1618 aa32.08■■■□□ 2.73
TMEM41A-202ENST00000382227 KDM5BQ9UGL1 1544 aa32.02■■■□□ 2.72
TMEM41A-202ENST00000382227 GLI2P10070 1586 aa32.02■■■□□ 2.72
TMEM41A-202ENST00000382227 CTTNBP2Q8WZ74 1663 aa31.99■■■□□ 2.71
TMEM41A-202ENST00000382227 PRXQ9BXM0 1461 aa31.97■■■□□ 2.71
TMEM41A-202ENST00000382227 ZCCHC11Q5TAX3 1644 aaKnown RBP31.93■■■□□ 2.7
TMEM41A-202ENST00000382227 GOLGA3Q08378 1498 aa31.92■■■□□ 2.7
TMEM41A-202ENST00000382227 EPRSP07814 1512 aaKnown RBP31.92■■■□□ 2.7
TMEM41A-202ENST00000382227 PPRC1Q5VV67 1664 aaKnown RBP31.91■■■□□ 2.7
TMEM41A-202ENST00000382227 MAP3K4Q9Y6R4 1608 aa31.83■■■□□ 2.69
TMEM41A-202ENST00000382227 WDR7Q9Y4E6 1490 aa31.8■■■□□ 2.68
TMEM41A-202ENST00000382227 ABCA8O94911 1581 aa31.79■■■□□ 2.68
TMEM41A-202ENST00000382227 KDM4FA0A1W2PPD8 638 aa31.78■■■□□ 2.68
TMEM41A-202ENST00000382227 TEX14Q8IWB6 1497 aa31.77■■■□□ 2.68
TMEM41A-202ENST00000382227 COL17A1Q9UMD9 1497 aaPredicted RBP31.72■■■□□ 2.67
TMEM41A-202ENST00000382227 CSRNP3Q8WYN3 585 aa31.72■■■□□ 2.67
TMEM41A-202ENST00000382227 FAM9AQ8IZU1 332 aaPredicted RBP31.65■■■□□ 2.66
TMEM41A-202ENST00000382227 P3H3Q8IVL6 736 aa31.64■■■□□ 2.66
TMEM41A-202ENST00000382227 KCNH8Q96L42 1107 aa31.64■■■□□ 2.66
TMEM41A-202ENST00000382227 CD109Q6YHK3 1445 aa31.61■■■□□ 2.65
TMEM41A-202ENST00000382227 EEA1Q15075 1411 aa31.59■■■□□ 2.65
TMEM41A-202ENST00000382227 MAGI3Q5TCQ9 1506 aa31.59■■■□□ 2.65
TMEM41A-202ENST00000382227 CFAP43Q8NDM7 1665 aa31.58■■■□□ 2.65
TMEM41A-202ENST00000382227 SAMD9Q5K651 1589 aa31.56■■■□□ 2.64
TMEM41A-202ENST00000382227 ATP10BO94823 1461 aa31.53■■■□□ 2.64
TMEM41A-202ENST00000382227 ARID3CA6NKF2 412 aa31.53■■■□□ 2.64
TMEM41A-202ENST00000382227 ADGRL1O94910 1474 aa31.52■■■□□ 2.64
TMEM41A-202ENST00000382227 RAPGEF6Q8TEU7 1601 aa31.43■■■□□ 2.62
TMEM41A-202ENST00000382227 RANGAP1P46060 587 aaPredicted RBP31.4■■■□□ 2.62
TMEM41A-202ENST00000382227 ABCA9Q8IUA7 1624 aa31.36■■■□□ 2.61
TMEM41A-202ENST00000382227 FHOD3Q2V2M9 1422 aa31.35■■■□□ 2.61
TMEM41A-202ENST00000382227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.35■■■□□ 2.61
TMEM41A-202ENST00000382227 HNRNPUL2Q1KMD3 747 aaKnown RBP31.35■■■□□ 2.61
TMEM41A-202ENST00000382227 ARAP3Q8WWN8 1544 aa31.34■■■□□ 2.61
TMEM41A-202ENST00000382227 NUP153P49790 1475 aaKnown RBP31.34■■■□□ 2.61
TMEM41A-202ENST00000382227 KIF21BO75037 1637 aa31.32■■■□□ 2.6
TMEM41A-202ENST00000382227 PHLDB1Q86UU1 1377 aa31.3■■■□□ 2.6
TMEM41A-202ENST00000382227 EFCAB5A4FU69 1503 aa31.25■■■□□ 2.59
TMEM41A-202ENST00000382227 NEO1Q92859 1461 aa31.22■■■□□ 2.59
TMEM41A-202ENST00000382227 PLEKHD1A6NEE1 506 aa31.19■■■□□ 2.58
TMEM41A-202ENST00000382227 RAPGEF3O95398 923 aa31.16■■■□□ 2.58
TMEM41A-202ENST00000382227 CHIC1Q5VXU3 224 aa31.12■■■□□ 2.57
TMEM41A-202ENST00000382227 UBTFP17480 764 aaKnown RBP31.1■■■□□ 2.57
TMEM41A-202ENST00000382227 EHMT2Q96KQ7 1210 aa31.09■■■□□ 2.57
TMEM41A-202ENST00000382227 HECW2Q9P2P5 1572 aa31.08■■■□□ 2.57
TMEM41A-202ENST00000382227 FRMPD1Q5SYB0 1578 aa31.06■■■□□ 2.56
TMEM41A-202ENST00000382227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.05■■■□□ 2.56
TMEM41A-202ENST00000382227 CDK13Q14004 1512 aaKnown RBP31.03■■■□□ 2.56
TMEM41A-202ENST00000382227 FANCAO15360 1455 aa31.01■■■□□ 2.55
TMEM41A-202ENST00000382227 AKNAQ7Z591 1439 aa31■■■□□ 2.55
TMEM41A-202ENST00000382227 DENND4BO75064 1496 aaPredicted RBP31■■■□□ 2.55
TMEM41A-202ENST00000382227 FMN1Q68DA7 1419 aa30.99■■■□□ 2.55
TMEM41A-202ENST00000382227 TTC37Q6PGP7 1564 aa30.99■■■□□ 2.55
TMEM41A-202ENST00000382227 CFAP74Q9C0B2 1584 aa30.98■■■□□ 2.55
TMEM41A-202ENST00000382227 ARHGAP35Q9NRY4 1499 aa30.97■■■□□ 2.55
TMEM41A-202ENST00000382227 ADAMTSL3P82987 1691 aa30.95■■■□□ 2.55
TMEM41A-202ENST00000382227 ATP1B4Q9UN42 357 aaPredicted RBP30.93■■■□□ 2.54
TMEM41A-202ENST00000382227 HECW1Q76N89 1606 aa30.93■■■□□ 2.54
TMEM41A-202ENST00000382227 RICTORQ6R327 1708 aa30.93■■■□□ 2.54
TMEM41A-202ENST00000382227 ARID4BQ4LE39 1312 aaPredicted RBP30.92■■■□□ 2.54
TMEM41A-202ENST00000382227 ARHGEF40Q8TER5 1519 aa30.91■■■□□ 2.54
TMEM41A-202ENST00000382227 PTPRMP28827 1452 aa30.9■■■□□ 2.54
TMEM41A-202ENST00000382227 BCORL1Q5H9F3 1711 aa30.87■■■□□ 2.53
TMEM41A-202ENST00000382227 PLCH2O75038 1416 aa30.87■■■□□ 2.53
TMEM41A-202ENST00000382227 ZMYM4Q5VZL5 1548 aa30.85■■■□□ 2.53
TMEM41A-202ENST00000382227 CDK11AQ9UQ88 783 aaPredicted RBP30.85■■■□□ 2.53
TMEM41A-202ENST00000382227 MADDQ8WXG6 1647 aa30.8■■■□□ 2.52
TMEM41A-202ENST00000382227 ILDR1Q86SU0 546 aaPredicted RBP30.8■■■□□ 2.52
TMEM41A-202ENST00000382227 SCAPERQ9BY12 1400 aa30.8■■■□□ 2.52
TMEM41A-202ENST00000382227 MAGI2Q86UL8 1455 aa30.79■■■□□ 2.52
TMEM41A-202ENST00000382227 ZFYVE16Q7Z3T8 1539 aa30.78■■■□□ 2.52
TMEM41A-202ENST00000382227 POGZQ7Z3K3 1410 aa30.77■■■□□ 2.52
TMEM41A-202ENST00000382227 YEATS2Q9ULM3 1422 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms