RNA–Protein interactions for RNA: ENST00000382079.3

C1QTNF3-AMACR-201, Transcript of C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene C1QTNF3-AMACR, Length 3,424 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACR-201ENST00000382079 ATP1B4Q9UN42 357 aaPredicted RBP13.87□□□□□ -0.19
C1QTNF3-AMACR-201ENST00000382079 MAPKBP1O60336 1514 aa13.86□□□□□ -0.19
C1QTNF3-AMACR-201ENST00000382079 CADPSQ9ULU8 1353 aa13.86□□□□□ -0.19
C1QTNF3-AMACR-201ENST00000382079 PHLDB1Q86UU1 1377 aa13.85□□□□□ -0.19
C1QTNF3-AMACR-201ENST00000382079 DDX10Q13206 875 aaKnown RBP13.85□□□□□ -0.19
C1QTNF3-AMACR-201ENST00000382079 SIN3AQ96ST3 1273 aa13.83□□□□□ -0.19
C1QTNF3-AMACR-201ENST00000382079 FGD5Q6ZNL6 1462 aa13.82□□□□□ -0.2
C1QTNF3-AMACR-201ENST00000382079 P3H3Q8IVL6 736 aa13.82□□□□□ -0.2
C1QTNF3-AMACR-201ENST00000382079 KCNH8Q96L42 1107 aa13.81□□□□□ -0.2
C1QTNF3-AMACR-201ENST00000382079 TSHZ2Q9NRE2 1034 aa13.81□□□□□ -0.2
C1QTNF3-AMACR-201ENST00000382079 NEFLP07196 543 aa13.8□□□□□ -0.2
C1QTNF3-AMACR-201ENST00000382079 ANP32CO43423 234 aa13.78□□□□□ -0.2
C1QTNF3-AMACR-201ENST00000382079 PPP1R15AO75807 674 aaPredicted RBP13.78□□□□□ -0.2
C1QTNF3-AMACR-201ENST00000382079 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.77□□□□□ -0.2
C1QTNF3-AMACR-201ENST00000382079 CCER2I3L3R5 266 aa13.77□□□□□ -0.21
C1QTNF3-AMACR-201ENST00000382079 WDR97A6NE52 1622 aa13.77□□□□□ -0.21
C1QTNF3-AMACR-201ENST00000382079 PRDM2Q13029 1718 aa13.76□□□□□ -0.21
C1QTNF3-AMACR-201ENST00000382079 FKBP8Q14318 412 aa13.76□□□□□ -0.21
C1QTNF3-AMACR-201ENST00000382079 FYCO1Q9BQS8 1478 aa13.74□□□□□ -0.21
C1QTNF3-AMACR-201ENST00000382079 FHOD3Q2V2M9 1422 aa13.73□□□□□ -0.21
C1QTNF3-AMACR-201ENST00000382079 CASKIN1Q8WXD9 1431 aa13.73□□□□□ -0.21
C1QTNF3-AMACR-201ENST00000382079 BCANQ96GW7 911 aa13.73□□□□□ -0.21
C1QTNF3-AMACR-201ENST00000382079 TONSLQ96HA7 1378 aa13.73□□□□□ -0.21
C1QTNF3-AMACR-201ENST00000382079 PCF11O94913 1555 aaKnown RBP13.73□□□□□ -0.21
C1QTNF3-AMACR-201ENST00000382079 CFAP43Q8NDM7 1665 aa13.72□□□□□ -0.21
C1QTNF3-AMACR-201ENST00000382079 AQRO60306 1485 aaKnown RBP eCLIP13.72□□□□□ -0.213e-6■■■■□ 24.7
C1QTNF3-AMACR-201ENST00000382079 EFCAB5A4FU69 1503 aa13.72□□□□□ -0.21
C1QTNF3-AMACR-201ENST00000382079 FMN1Q68DA7 1419 aa13.7□□□□□ -0.22
C1QTNF3-AMACR-201ENST00000382079 FANCD2Q9BXW9 1451 aa13.7□□□□□ -0.22
C1QTNF3-AMACR-201ENST00000382079 HIRIP3Q9BW71 556 aaPredicted RBP13.69□□□□□ -0.22
C1QTNF3-AMACR-201ENST00000382079 MTUS2Q5JR59 1369 aa13.69□□□□□ -0.22
C1QTNF3-AMACR-201ENST00000382079 ANP32EQ9BTT0 268 aa13.68□□□□□ -0.22
C1QTNF3-AMACR-201ENST00000382079 FGD6Q6ZV73 1430 aa13.68□□□□□ -0.22
C1QTNF3-AMACR-201ENST00000382079 ABCA10Q8WWZ4 1543 aa13.66□□□□□ -0.22
C1QTNF3-AMACR-201ENST00000382079 TRIM52Q96A61 297 aa13.65□□□□□ -0.22
C1QTNF3-AMACR-201ENST00000382079 RAD54L2Q9Y4B4 1467 aa13.64□□□□□ -0.23
C1QTNF3-AMACR-201ENST00000382079 CCDC18Q5T9S5 1454 aa13.64□□□□□ -0.23
C1QTNF3-AMACR-201ENST00000382079 UACAQ9BZF9 1416 aa13.64□□□□□ -0.23
C1QTNF3-AMACR-201ENST00000382079 DNMBPQ6XZF7 1577 aa13.64□□□□□ -0.23
C1QTNF3-AMACR-201ENST00000382079 HFM1A2PYH4 1435 aa13.63□□□□□ -0.23
C1QTNF3-AMACR-201ENST00000382079 POLA1P09884 1462 aaPredicted RBP13.61□□□□□ -0.23
C1QTNF3-AMACR-201ENST00000382079 CC2D2AQ9P2K1 1620 aa13.61□□□□□ -0.23
C1QTNF3-AMACR-201ENST00000382079 TOPBP1Q92547 1522 aa13.61□□□□□ -0.23
C1QTNF3-AMACR-201ENST00000382079 CUL7Q14999 1698 aa13.61□□□□□ -0.23
C1QTNF3-AMACR-201ENST00000382079 AEBP2Q6ZN18 517 aaPredicted RBP13.58□□□□□ -0.24
C1QTNF3-AMACR-201ENST00000382079 MYOM3Q5VTT5 1437 aa13.58□□□□□ -0.24
C1QTNF3-AMACR-201ENST00000382079 SNAPC4Q5SXM2 1469 aa13.56□□□□□ -0.24
C1QTNF3-AMACR-201ENST00000382079 NAIPQ13075 1403 aa13.56□□□□□ -0.24
C1QTNF3-AMACR-201ENST00000382079 NCOA2Q15596 1464 aa13.55□□□□□ -0.24
C1QTNF3-AMACR-201ENST00000382079 PTPRKQ15262 1439 aa13.55□□□□□ -0.24
C1QTNF3-AMACR-201ENST00000382079 RBM19Q9Y4C8 960 aaKnown RBP13.55□□□□□ -0.24
C1QTNF3-AMACR-201ENST00000382079 PTPN23Q9H3S7 1636 aa13.55□□□□□ -0.24
C1QTNF3-AMACR-201ENST00000382079 HNRNPUQ00839 825 aaKnown RBP eCLIP13.54□□□□□ -0.24
C1QTNF3-AMACR-201ENST00000382079 CTTNBP2Q8WZ74 1663 aa13.54□□□□□ -0.24
C1QTNF3-AMACR-201ENST00000382079 EIF4G2P78344 907 aaKnown RBP eCLIP13.51□□□□□ -0.25
C1QTNF3-AMACR-201ENST00000382079 EHBP1L1Q8N3D4 1523 aa13.51□□□□□ -0.25
C1QTNF3-AMACR-201ENST00000382079 TDRD9Q8NDG6 1382 aaKnown RBP13.51□□□□□ -0.25
C1QTNF3-AMACR-201ENST00000382079 RRP7BPQ9NSQ0 103 aa13.51□□□□□ -0.25
C1QTNF3-AMACR-201ENST00000382079 THOC2Q8NI27 1593 aaKnown RBP13.5□□□□□ -0.25
C1QTNF3-AMACR-201ENST00000382079 GRIN2BQ13224 1484 aa13.5□□□□□ -0.25
C1QTNF3-AMACR-201ENST00000382079 HSPA5P11021 654 aaKnown RBP13.5□□□□□ -0.25
C1QTNF3-AMACR-201ENST00000382079 CHIC2Q9UKJ5 165 aa13.49□□□□□ -0.25
C1QTNF3-AMACR-201ENST00000382079 CDK11AQ9UQ88 783 aaPredicted RBP13.48□□□□□ -0.25
C1QTNF3-AMACR-201ENST00000382079 GAPVD1Q14C86 1478 aa13.48□□□□□ -0.25
C1QTNF3-AMACR-201ENST00000382079 SUPT6HQ7KZ85 1726 aaKnown RBP13.48□□□□□ -0.25
C1QTNF3-AMACR-201ENST00000382079 NESP48681 1621 aa13.48□□□□□ -0.25
C1QTNF3-AMACR-201ENST00000382079 SAMD9Q5K651 1589 aa13.47□□□□□ -0.25
C1QTNF3-AMACR-201ENST00000382079 ERICH6BQ5W0A0 696 aa13.47□□□□□ -0.25
C1QTNF3-AMACR-201ENST00000382079 WASHC2AQ641Q2 1341 aa13.46□□□□□ -0.26
C1QTNF3-AMACR-201ENST00000382079 UGGT2Q9NYU1 1516 aa13.45□□□□□ -0.26
C1QTNF3-AMACR-201ENST00000382079 AKNAQ7Z591 1439 aa13.44□□□□□ -0.26
C1QTNF3-AMACR-201ENST00000382079 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
C1QTNF3-AMACR-201ENST00000382079 MPHOSPH9Q99550 1183 aa13.44□□□□□ -0.26
C1QTNF3-AMACR-201ENST00000382079 TCOF1Q13428 1488 aaKnown RBP13.42□□□□□ -0.26
C1QTNF3-AMACR-201ENST00000382079 KDM5BQ9UGL1 1544 aa13.42□□□□□ -0.26
C1QTNF3-AMACR-201ENST00000382079 PDS5BQ9NTI5 1447 aa13.42□□□□□ -0.26
C1QTNF3-AMACR-201ENST00000382079 LAMC3Q9Y6N6 1575 aa13.41□□□□□ -0.26
C1QTNF3-AMACR-201ENST00000382079 MIA2Q96PC5 1412 aa13.41□□□□□ -0.26
C1QTNF3-AMACR-201ENST00000382079 CNTLNQ9NXG0 1405 aa13.41□□□□□ -0.26
C1QTNF3-AMACR-201ENST00000382079 L3MBTL2Q969R5 705 aa13.41□□□□□ -0.26
C1QTNF3-AMACR-201ENST00000382079 ARHGEF11O15085 1522 aa13.4□□□□□ -0.26
C1QTNF3-AMACR-201ENST00000382079 ABCA5Q8WWZ7 1642 aa13.4□□□□□ -0.26
C1QTNF3-AMACR-201ENST00000382079 IRX6P78412 446 aaPredicted RBP13.4□□□□□ -0.26
C1QTNF3-AMACR-201ENST00000382079 PPP4R2Q9NY27 417 aa13.4□□□□□ -0.26
C1QTNF3-AMACR-201ENST00000382079 ERICH6Q7L0X2 663 aa13.39□□□□□ -0.27
C1QTNF3-AMACR-201ENST00000382079 FANCIQ9NVI1 1328 aa13.38□□□□□ -0.27
C1QTNF3-AMACR-201ENST00000382079 MRS2Q9HD23 443 aa13.38□□□□□ -0.27
C1QTNF3-AMACR-201ENST00000382079 HECW1Q76N89 1606 aa13.37□□□□□ -0.27
C1QTNF3-AMACR-201ENST00000382079 CCDC7Q96M83 1385 aa13.37□□□□□ -0.27
C1QTNF3-AMACR-201ENST00000382079 PRKRIP1Q9H875 184 aaPredicted RBP13.37□□□□□ -0.27
C1QTNF3-AMACR-201ENST00000382079 FAM9BQ8IZU0 186 aa13.37□□□□□ -0.27
C1QTNF3-AMACR-201ENST00000382079 KIF21AQ7Z4S6 1674 aa13.36□□□□□ -0.27
C1QTNF3-AMACR-201ENST00000382079 EPRSP07814 1512 aaKnown RBP13.36□□□□□ -0.27
C1QTNF3-AMACR-201ENST00000382079 MAGI3Q5TCQ9 1506 aa13.36□□□□□ -0.27
C1QTNF3-AMACR-201ENST00000382079 GCC2Q8IWJ2 1684 aa13.35□□□□□ -0.27
C1QTNF3-AMACR-201ENST00000382079 NCOA1Q15788 1441 aa13.35□□□□□ -0.27
C1QTNF3-AMACR-201ENST00000382079 LRRIQ1Q96JM4 1722 aa13.34□□□□□ -0.27
C1QTNF3-AMACR-201ENST00000382079 FOXD1Q16676 465 aa13.33□□□□□ -0.27
C1QTNF3-AMACR-201ENST00000382079 ZBED9Q6R2W3 1325 aa13.33□□□□□ -0.28
C1QTNF3-AMACR-201ENST00000382079 ROCK1Q13464 1354 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms