RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 GOLGA3Q08378 1498 aa30.84■■■□□ 2.53
SMN2-202ENST00000380742 KIAA0586Q9BVV6 1533 aa30.78■■■□□ 2.52
SMN2-202ENST00000380742 IQGAP2Q13576 1575 aa30.72■■■□□ 2.51
SMN2-202ENST00000380742 UBTFP17480 764 aaKnown RBP30.69■■■□□ 2.5
SMN2-202ENST00000380742 SHROOM2Q13796 1616 aa30.69■■■□□ 2.5
SMN2-202ENST00000380742 LOC105371045A0A1W2PR82 267 aa30.66■■■□□ 2.5
SMN2-202ENST00000380742 JPH4Q96JJ6 628 aa30.62■■■□□ 2.49
SMN2-202ENST00000380742 UGGT2Q9NYU1 1516 aa30.57■■■□□ 2.48
SMN2-202ENST00000380742 TNIKQ9UKE5 1360 aa30.55■■■□□ 2.48
SMN2-202ENST00000380742 ERCC6L2Q5T890 1561 aa30.54■■■□□ 2.48
SMN2-202ENST00000380742 PRG4Q92954 1404 aaPredicted RBP30.52■■■□□ 2.48
SMN2-202ENST00000380742 DNAJC5Q9H3Z4 198 aa30.52■■■□□ 2.48
SMN2-202ENST00000380742 ARHGEF11O15085 1522 aa30.48■■■□□ 2.47
SMN2-202ENST00000380742 DISP1Q96F81 1524 aa30.48■■■□□ 2.47
SMN2-202ENST00000380742 RIMBP3CA6NJZ7 1639 aa30.47■■■□□ 2.47
SMN2-202ENST00000380742 RIMBP3BA6NNM3 1639 aa30.47■■■□□ 2.47
SMN2-202ENST00000380742 RIMBP3Q9UFD9 1639 aa30.47■■■□□ 2.47
SMN2-202ENST00000380742 RANGAP1P46060 587 aaPredicted RBP30.46■■■□□ 2.47
SMN2-202ENST00000380742 KIAA0556O60303 1618 aa30.44■■■□□ 2.46
SMN2-202ENST00000380742 SAMD9Q5K651 1589 aa30.44■■■□□ 2.46
SMN2-202ENST00000380742 CARMIL2Q6F5E8 1435 aa30.4■■■□□ 2.46
SMN2-202ENST00000380742 EFCAB5A4FU69 1503 aa30.37■■■□□ 2.45
SMN2-202ENST00000380742 ARHGAP35Q9NRY4 1499 aa30.33■■■□□ 2.45
SMN2-202ENST00000380742 P3H3Q8IVL6 736 aa30.32■■■□□ 2.44
SMN2-202ENST00000380742 CEP162Q5TB80 1403 aa30.32■■■□□ 2.44
SMN2-202ENST00000380742 CLIP1P30622 1438 aa30.3■■■□□ 2.44
SMN2-202ENST00000380742 ARAP1Q96P48 1450 aa30.29■■■□□ 2.44
SMN2-202ENST00000380742 FHOD3Q2V2M9 1422 aa30.25■■■□□ 2.43
SMN2-202ENST00000380742 PTPRGP23470 1445 aa30.22■■■□□ 2.43
SMN2-202ENST00000380742 TTBK1Q5TCY1 1321 aaPredicted RBP30.21■■■□□ 2.43
SMN2-202ENST00000380742 CYB5RLQ6IPT4 315 aa30.15■■■□□ 2.42
SMN2-202ENST00000380742 PLB1Q6P1J6 1458 aa30.07■■■□□ 2.4
SMN2-202ENST00000380742 ABCA8O94911 1581 aa30.06■■■□□ 2.4
SMN2-202ENST00000380742 FMN1Q68DA7 1419 aa30.05■■■□□ 2.4
SMN2-202ENST00000380742 UACAQ9BZF9 1416 aa30.04■■■□□ 2.4
SMN2-202ENST00000380742 ADCY10Q96PN6 1610 aa30.04■■■□□ 2.4
SMN2-202ENST00000380742 RAPGEF6Q8TEU7 1601 aa30.03■■■□□ 2.4
SMN2-202ENST00000380742 ABCC2Q92887 1545 aa30■■■□□ 2.39
SMN2-202ENST00000380742 UHRF1BP1LA0JNW5 1464 aa29.99■■■□□ 2.39
SMN2-202ENST00000380742 PCF11O94913 1555 aaKnown RBP29.96■■■□□ 2.39
SMN2-202ENST00000380742 VPS8Q8N3P4 1428 aa29.9■■■□□ 2.38
SMN2-202ENST00000380742 CASKIN1Q8WXD9 1431 aa29.9■■■□□ 2.38
SMN2-202ENST00000380742 NUP153P49790 1475 aaKnown RBP29.9■■■□□ 2.38
SMN2-202ENST00000380742 LRRIQ1Q96JM4 1722 aa29.9■■■□□ 2.38
SMN2-202ENST00000380742 HECW1Q76N89 1606 aa29.89■■■□□ 2.38
SMN2-202ENST00000380742 ZCCHC11Q5TAX3 1644 aaKnown RBP29.86■■■□□ 2.37
SMN2-202ENST00000380742 FYCO1Q9BQS8 1478 aa29.86■■■□□ 2.37
SMN2-202ENST00000380742 KDM5BQ9UGL1 1544 aa29.86■■■□□ 2.37
SMN2-202ENST00000380742 ATP1B4Q9UN42 357 aaPredicted RBP29.83■■■□□ 2.37
SMN2-202ENST00000380742 ARID3CA6NKF2 412 aa29.81■■■□□ 2.36
SMN2-202ENST00000380742 ATP10BO94823 1461 aa29.81■■■□□ 2.36
SMN2-202ENST00000380742 EPRSP07814 1512 aaKnown RBP29.79■■■□□ 2.36
SMN2-202ENST00000380742 NPM1P06748 294 aaKnown RBP eCLIP29.77■■■□□ 2.36
SMN2-202ENST00000380742 CDK13Q14004 1512 aaKnown RBP29.77■■■□□ 2.36
SMN2-202ENST00000380742 CCDC18Q5T9S5 1454 aa29.71■■■□□ 2.35
SMN2-202ENST00000380742 MAPKBP1O60336 1514 aa29.69■■■□□ 2.34
SMN2-202ENST00000380742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.68■■■□□ 2.34
SMN2-202ENST00000380742 HNRNPUL2Q1KMD3 747 aaKnown RBP29.68■■■□□ 2.34
SMN2-202ENST00000380742 CFAP43Q8NDM7 1665 aa29.66■■■□□ 2.34
SMN2-202ENST00000380742 ASXL2Q76L83 1435 aa29.64■■■□□ 2.34
SMN2-202ENST00000380742 TIAM1Q13009 1591 aa29.62■■■□□ 2.33
SMN2-202ENST00000380742 WDR7Q9Y4E6 1490 aa29.58■■■□□ 2.33
SMN2-202ENST00000380742 MAP3K1Q13233 1512 aa29.58■■■□□ 2.33
SMN2-202ENST00000380742 MAGI3Q5TCQ9 1506 aa29.58■■■□□ 2.33
SMN2-202ENST00000380742 PLEKHD1A6NEE1 506 aa29.55■■■□□ 2.32
SMN2-202ENST00000380742 CDK11AQ9UQ88 783 aaPredicted RBP29.53■■■□□ 2.32
SMN2-202ENST00000380742 KIF13AQ9H1H9 1805 aa29.5■■■□□ 2.31
SMN2-202ENST00000380742 APLP2Q06481 763 aa29.5■■■□□ 2.31
SMN2-202ENST00000380742 TROQ12816 1431 aaPredicted RBP29.49■■■□□ 2.31
SMN2-202ENST00000380742 DIP2BQ9P265 1576 aa29.49■■■□□ 2.31
SMN2-202ENST00000380742 KCNH8Q96L42 1107 aa29.48■■■□□ 2.31
SMN2-202ENST00000380742 ABCC10Q5T3U5 1492 aa29.47■■■□□ 2.31
SMN2-202ENST00000380742 KIF14Q15058 1648 aa29.46■■■□□ 2.31
SMN2-202ENST00000380742 LRRC9Q6ZRR7 1453 aa29.46■■■□□ 2.31
SMN2-202ENST00000380742 KANK4Q5T7N3 995 aaPredicted RBP29.45■■■□□ 2.31
SMN2-202ENST00000380742 MTUS2Q5JR59 1369 aa29.45■■■□□ 2.3
SMN2-202ENST00000380742 EHBP1L1Q8N3D4 1523 aa29.44■■■□□ 2.3
SMN2-202ENST00000380742 GLI2P10070 1586 aa29.41■■■□□ 2.3
SMN2-202ENST00000380742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.38■■■□□ 2.29
SMN2-202ENST00000380742 ABCA9Q8IUA7 1624 aa29.38■■■□□ 2.29
SMN2-202ENST00000380742 FAM69CQ0P6D2 419 aa29.38■■■□□ 2.29
SMN2-202ENST00000380742 SUPT6HQ7KZ85 1726 aaKnown RBP29.36■■■□□ 2.29
SMN2-202ENST00000380742 TTC37Q6PGP7 1564 aa29.36■■■□□ 2.29
SMN2-202ENST00000380742 MAP3K4Q9Y6R4 1608 aa29.34■■■□□ 2.29
SMN2-202ENST00000380742 TRHP20396 242 aaPredicted RBP29.33■■■□□ 2.29
SMN2-202ENST00000380742 TSPOAP1O95153 1857 aa29.3■■■□□ 2.28
SMN2-202ENST00000380742 PPARGC1BQ86YN6 1023 aaKnown RBP29.29■■■□□ 2.28
SMN2-202ENST00000380742 NCOA2Q15596 1464 aa29.28■■■□□ 2.28
SMN2-202ENST00000380742 CDC42BPAQ5VT25 1732 aa29.27■■■□□ 2.28
SMN2-202ENST00000380742 MYO5CQ9NQX4 1742 aa29.27■■■□□ 2.28
SMN2-202ENST00000380742 PPRC1Q5VV67 1664 aaKnown RBP29.24■■■□□ 2.27
SMN2-202ENST00000380742 CD109Q6YHK3 1445 aa29.24■■■□□ 2.27
SMN2-202ENST00000380742 CDC42BPBQ9Y5S2 1711 aa29.22■■■□□ 2.27
SMN2-202ENST00000380742 PREX2Q70Z35 1606 aa29.2■■■□□ 2.26
SMN2-202ENST00000380742 GPATCH8Q9UKJ3 1502 aaKnown RBP29.18■■■□□ 2.26
SMN2-202ENST00000380742 CCNB3Q8WWL7 1395 aa29.17■■■□□ 2.26
SMN2-202ENST00000380742 ITSN2Q9NZM3 1697 aa29.17■■■□□ 2.26
SMN2-202ENST00000380742 PLCH2O75038 1416 aa29.17■■■□□ 2.26
SMN2-202ENST00000380742 ARAP3Q8WWN8 1544 aa29.13■■■□□ 2.25
SMN2-202ENST00000380742 PHLDB1Q86UU1 1377 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms