RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 NISCHQ9Y2I1 1504 aa44.71■■■■■ 4.75
SMN2-202ENST00000380742 CCDC180Q9P1Z9 1646 aa39.52■■■■□ 3.92
SMN2-202ENST00000380742 ABCC9O60706 1549 aa38.1■■■■□ 3.69
SMN2-202ENST00000380742 ZCCHC6Q5VYS8 1495 aaKnown RBP37.37■■■■□ 3.57
SMN2-202ENST00000380742 DCAF8L2P0C7V8 631 aa37.1■■■■□ 3.53
SMN2-202ENST00000380742 DCAF1Q9Y4B6 1507 aa37■■■■□ 3.51
SMN2-202ENST00000380742 NACADO15069 1562 aa36.98■■■■□ 3.51
SMN2-202ENST00000380742 MYO15BQ96JP2 1530 aa36.92■■■■□ 3.5
SMN2-202ENST00000380742 RB1CC1Q8TDY2 1594 aa36.88■■■■□ 3.49
SMN2-202ENST00000380742 UNC13AQ9UPW8 1703 aa36.21■■■■□ 3.39
SMN2-202ENST00000380742 SCRIBQ14160 1630 aa36.12■■■■□ 3.37
SMN2-202ENST00000380742 BICRAQ9NZM4 1560 aa35.81■■■■□ 3.32
SMN2-202ENST00000380742 SHROOM4Q9ULL8 1493 aa35.69■■■■□ 3.3
SMN2-202ENST00000380742 PABPN1Q86U42 306 aaKnown RBP eCLIP35.68■■■■□ 3.3
SMN2-202ENST00000380742 CECR2Q9BXF3 1484 aa34.79■■■■□ 3.16
SMN2-202ENST00000380742 EIF4G1Q04637 1599 aaKnown RBP34.79■■■■□ 3.16
SMN2-202ENST00000380742 SMARCA4P51532 1647 aa34.6■■■■□ 3.13
SMN2-202ENST00000380742 BAZ1AQ9NRL2 1556 aaPredicted RBP34.6■■■■□ 3.13
SMN2-202ENST00000380742 CC2D2AQ9P2K1 1620 aa34.52■■■■□ 3.12
SMN2-202ENST00000380742 MROH2BQ7Z745 1585 aa34.49■■■■□ 3.11
SMN2-202ENST00000380742 DNAJC5BQ9UF47 199 aa34.46■■■■□ 3.11
SMN2-202ENST00000380742 RSF1Q96T23 1441 aaPredicted RBP34.28■■■■□ 3.08
SMN2-202ENST00000380742 PEG3Q9GZU2 1588 aa34.23■■■■□ 3.07
SMN2-202ENST00000380742 ATAD2BQ9ULI0 1458 aa34.23■■■■□ 3.07
SMN2-202ENST00000380742 SMARCA2P51531 1590 aa34.2■■■■□ 3.07
SMN2-202ENST00000380742 WIZO95785 1651 aa34.2■■■■□ 3.07
SMN2-202ENST00000380742 NCAPD3P42695 1498 aa34.1■■■■□ 3.05
SMN2-202ENST00000380742 HMGXB3Q12766 1538 aa34■■■■□ 3.03
SMN2-202ENST00000380742 BAZ1BQ9UIG0 1483 aaKnown RBP33.97■■■■□ 3.03
SMN2-202ENST00000380742 SUPT5HO00267 1087 aaKnown RBP33.85■■■■□ 3.01
SMN2-202ENST00000380742 TOP2AP11388 1531 aaKnown RBP33.8■■■■□ 3
SMN2-202ENST00000380742 CCDC88BA6NC98 1476 aa33.41■■■□□ 2.94
SMN2-202ENST00000380742 NESP48681 1621 aa33.16■■■□□ 2.9
SMN2-202ENST00000380742 LAMC3Q9Y6N6 1575 aa33.13■■■□□ 2.89
SMN2-202ENST00000380742 CADPSQ9ULU8 1353 aa33.13■■■□□ 2.89
SMN2-202ENST00000380742 CFTRP13569 1480 aa33.07■■■□□ 2.88
SMN2-202ENST00000380742 PRDM2Q13029 1718 aa32.99■■■□□ 2.87
SMN2-202ENST00000380742 KIF21AQ7Z4S6 1674 aa32.84■■■□□ 2.85
SMN2-202ENST00000380742 PDS5BQ9NTI5 1447 aa32.84■■■□□ 2.85
SMN2-202ENST00000380742 FANCD2Q9BXW9 1451 aa32.77■■■□□ 2.84
SMN2-202ENST00000380742 ERCC6Q03468 1493 aa32.74■■■□□ 2.83
SMN2-202ENST00000380742 CEP164Q9UPV0 1460 aa32.66■■■□□ 2.82
SMN2-202ENST00000380742 THOC2Q8NI27 1593 aaKnown RBP32.54■■■□□ 2.8
SMN2-202ENST00000380742 MRC2Q9UBG0 1479 aa32.49■■■□□ 2.79
SMN2-202ENST00000380742 URB2Q14146 1524 aaKnown RBP32.44■■■□□ 2.78
SMN2-202ENST00000380742 ABCC8Q09428 1581 aa32.41■■■□□ 2.78
SMN2-202ENST00000380742 WDR62O43379 1518 aa32.39■■■□□ 2.78
SMN2-202ENST00000380742 DNMBPQ6XZF7 1577 aa32.35■■■□□ 2.77
SMN2-202ENST00000380742 CUX1P39880 1505 aa32.33■■■□□ 2.77
SMN2-202ENST00000380742 TOPBP1Q92547 1522 aa32.33■■■□□ 2.77
SMN2-202ENST00000380742 WRNQ14191 1432 aaPredicted RBP eCLIP32.29■■■□□ 2.76
SMN2-202ENST00000380742 SYNJ1O43426 1573 aa32.25■■■□□ 2.75
SMN2-202ENST00000380742 BIVM-ERCC5R4GMW8 1640 aa32.22■■■□□ 2.75
SMN2-202ENST00000380742 TOP2BQ02880 1626 aa32.19■■■□□ 2.74
SMN2-202ENST00000380742 CUX2O14529 1486 aa32.17■■■□□ 2.74
SMN2-202ENST00000380742 FGD5Q6ZNL6 1462 aa32.1■■■□□ 2.73
SMN2-202ENST00000380742 POLA1P09884 1462 aaPredicted RBP32.09■■■□□ 2.73
SMN2-202ENST00000380742 TARBP1Q13395 1621 aaKnown RBP31.97■■■□□ 2.71
SMN2-202ENST00000380742 RAD54L2Q9Y4B4 1467 aa31.97■■■□□ 2.71
SMN2-202ENST00000380742 SOGA1O94964 1423 aa31.95■■■□□ 2.71
SMN2-202ENST00000380742 CHIC1Q5VXU3 224 aa31.94■■■□□ 2.7
SMN2-202ENST00000380742 IFT140Q96RY7 1462 aa31.94■■■□□ 2.7
SMN2-202ENST00000380742 TRIM41Q8WV44 630 aa31.92■■■□□ 2.7
SMN2-202ENST00000380742 WDR97A6NE52 1622 aa31.88■■■□□ 2.69
SMN2-202ENST00000380742 ABCA10Q8WWZ4 1543 aa31.8■■■□□ 2.68
SMN2-202ENST00000380742 ZNF608Q9ULD9 1512 aaPredicted RBP31.8■■■□□ 2.68
SMN2-202ENST00000380742 EIF4G3O43432 1585 aaKnown RBP31.71■■■□□ 2.67
SMN2-202ENST00000380742 TDRD9Q8NDG6 1382 aaKnown RBP31.71■■■□□ 2.67
SMN2-202ENST00000380742 AQRO60306 1485 aaKnown RBP eCLIP31.68■■■□□ 2.66
SMN2-202ENST00000380742 ABCA5Q8WWZ7 1642 aa31.67■■■□□ 2.66
SMN2-202ENST00000380742 GAPVD1Q14C86 1478 aa31.6■■■□□ 2.65
SMN2-202ENST00000380742 PBRM1Q86U86 1689 aa31.59■■■□□ 2.65
SMN2-202ENST00000380742 KIF27Q86VH2 1401 aa31.54■■■□□ 2.64
SMN2-202ENST00000380742 RUSC2Q8N2Y8 1516 aa31.54■■■□□ 2.64
SMN2-202ENST00000380742 GRIN2BQ13224 1484 aa31.49■■■□□ 2.63
SMN2-202ENST00000380742 ERICH3Q5RHP9 1530 aa31.43■■■□□ 2.62
SMN2-202ENST00000380742 SNAPC4Q5SXM2 1469 aa31.4■■■□□ 2.62
SMN2-202ENST00000380742 IGF1RP08069 1367 aa31.38■■■□□ 2.61
SMN2-202ENST00000380742 MAGI1Q96QZ7 1491 aaPredicted RBP31.35■■■□□ 2.61
SMN2-202ENST00000380742 EEA1Q15075 1411 aa31.32■■■□□ 2.6
SMN2-202ENST00000380742 ADAMTS12P58397 1594 aa31.31■■■□□ 2.6
SMN2-202ENST00000380742 CUL7Q14999 1698 aa31.29■■■□□ 2.6
SMN2-202ENST00000380742 FAM9AQ8IZU1 332 aaPredicted RBP31.28■■■□□ 2.6
SMN2-202ENST00000380742 CHD1O14646 1710 aa31.26■■■□□ 2.59
SMN2-202ENST00000380742 FHAD1B1AJZ9 1412 aa31.23■■■□□ 2.59
SMN2-202ENST00000380742 SYNJ2O15056 1496 aa31.23■■■□□ 2.59
SMN2-202ENST00000380742 CSRNP3Q8WYN3 585 aa31.21■■■□□ 2.59
SMN2-202ENST00000380742 CARMIL1Q5VZK9 1371 aa31.19■■■□□ 2.58
SMN2-202ENST00000380742 FBLN2P98095 1184 aa31.15■■■□□ 2.58
SMN2-202ENST00000380742 CHMP7Q8WUX9 453 aaPredicted RBP31.15■■■□□ 2.58
SMN2-202ENST00000380742 PRXQ9BXM0 1461 aa31.12■■■□□ 2.57
SMN2-202ENST00000380742 GRIN2AQ12879 1464 aa31.11■■■□□ 2.57
SMN2-202ENST00000380742 RAPGEF2Q9Y4G8 1499 aa31.08■■■□□ 2.57
SMN2-202ENST00000380742 KIF21BO75037 1637 aa31.02■■■□□ 2.56
SMN2-202ENST00000380742 CEP170Q5SW79 1584 aa30.97■■■□□ 2.55
SMN2-202ENST00000380742 NUP160Q12769 1436 aa30.95■■■□□ 2.54
SMN2-202ENST00000380742 OSCARQ8IYS5 282 aa30.94■■■□□ 2.54
SMN2-202ENST00000380742 CLASP1Q7Z460 1538 aa30.86■■■□□ 2.53
SMN2-202ENST00000380742 EHMT2Q96KQ7 1210 aa30.85■■■□□ 2.53
SMN2-202ENST00000380742 CTTNBP2Q8WZ74 1663 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms