RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 KIF27Q86VH2 1401 aa40.48■■■■■ 4.07
U2AF1-202ENST00000380276 KIF13AQ9H1H9 1805 aa40.44■■■■■ 4.06
U2AF1-202ENST00000380276 CUL7Q14999 1698 aa40.43■■■■■ 4.06
U2AF1-202ENST00000380276 NPM1P06748 294 aaKnown RBP eCLIP40.42■■■■■ 4.06
U2AF1-202ENST00000380276 IGF1RP08069 1367 aa40.42■■■■■ 4.06
U2AF1-202ENST00000380276 KIAA0586Q9BVV6 1533 aa40.37■■■■■ 4.05
U2AF1-202ENST00000380276 FAM69CQ0P6D2 419 aa40.29■■■■■ 4.04
U2AF1-202ENST00000380276 ADCY10Q96PN6 1610 aa40.29■■■■■ 4.04
U2AF1-202ENST00000380276 ABCC10Q5T3U5 1492 aa40.23■■■■■ 4.03
U2AF1-202ENST00000380276 MAPKBP1O60336 1514 aa40.22■■■■■ 4.03
U2AF1-202ENST00000380276 CARMIL1Q5VZK9 1371 aa40.21■■■■■ 4.03
U2AF1-202ENST00000380276 TTBK1Q5TCY1 1321 aaPredicted RBP40.2■■■■■ 4.03
U2AF1-202ENST00000380276 DIP2BQ9P265 1576 aa40.15■■■■■ 4.02
U2AF1-202ENST00000380276 PTPRGP23470 1445 aa40.08■■■■■ 4.01
U2AF1-202ENST00000380276 CARMIL2Q6F5E8 1435 aa40.05■■■■■ 4
U2AF1-202ENST00000380276 IQGAP2Q13576 1575 aa40.01■■■■□ 3.99
U2AF1-202ENST00000380276 TNIKQ9UKE5 1360 aa39.99■■■■□ 3.99
U2AF1-202ENST00000380276 TSPOAP1O95153 1857 aa39.98■■■■□ 3.99
U2AF1-202ENST00000380276 KDM6BO15054 1643 aa39.92■■■■□ 3.98
U2AF1-202ENST00000380276 ABCC2Q92887 1545 aa39.86■■■■□ 3.97
U2AF1-202ENST00000380276 RAPGEF2Q9Y4G8 1499 aa39.83■■■■□ 3.97
U2AF1-202ENST00000380276 DISP1Q96F81 1524 aa39.78■■■■□ 3.96
U2AF1-202ENST00000380276 ASXL2Q76L83 1435 aa39.77■■■■□ 3.96
U2AF1-202ENST00000380276 UACAQ9BZF9 1416 aa39.76■■■■□ 3.96
U2AF1-202ENST00000380276 PLB1Q6P1J6 1458 aa39.74■■■■□ 3.95
U2AF1-202ENST00000380276 UHRF1BP1LA0JNW5 1464 aa39.73■■■■□ 3.95
U2AF1-202ENST00000380276 UGGT2Q9NYU1 1516 aa39.69■■■■□ 3.94
U2AF1-202ENST00000380276 KIAA0556O60303 1618 aa39.65■■■■□ 3.94
U2AF1-202ENST00000380276 GLI2P10070 1586 aa39.62■■■■□ 3.93
U2AF1-202ENST00000380276 PPRC1Q5VV67 1664 aaKnown RBP39.57■■■■□ 3.92
U2AF1-202ENST00000380276 ZCCHC11Q5TAX3 1644 aaKnown RBP39.56■■■■□ 3.92
U2AF1-202ENST00000380276 CTTNBP2Q8WZ74 1663 aa39.56■■■■□ 3.92
U2AF1-202ENST00000380276 KDM5BQ9UGL1 1544 aa39.55■■■■□ 3.92
U2AF1-202ENST00000380276 KDM4FA0A1W2PPD8 638 aa39.51■■■■□ 3.92
U2AF1-202ENST00000380276 EPRSP07814 1512 aaKnown RBP39.5■■■■□ 3.91
U2AF1-202ENST00000380276 MAP3K4Q9Y6R4 1608 aa39.43■■■■□ 3.9
U2AF1-202ENST00000380276 GOLGA3Q08378 1498 aa39.42■■■■□ 3.9
U2AF1-202ENST00000380276 TEX14Q8IWB6 1497 aa39.38■■■■□ 3.9
U2AF1-202ENST00000380276 WDR7Q9Y4E6 1490 aa39.35■■■■□ 3.89
U2AF1-202ENST00000380276 PRXQ9BXM0 1461 aa39.3■■■■□ 3.88
U2AF1-202ENST00000380276 COL17A1Q9UMD9 1497 aaPredicted RBP39.3■■■■□ 3.88
U2AF1-202ENST00000380276 ABCA8O94911 1581 aa39.26■■■■□ 3.88
U2AF1-202ENST00000380276 KCNH8Q96L42 1107 aa39.24■■■■□ 3.87
U2AF1-202ENST00000380276 ADGRL1O94910 1474 aa39.23■■■■□ 3.87
U2AF1-202ENST00000380276 P3H3Q8IVL6 736 aa39.17■■■■□ 3.86
U2AF1-202ENST00000380276 FAM9AQ8IZU1 332 aaPredicted RBP39.17■■■■□ 3.86
U2AF1-202ENST00000380276 CD109Q6YHK3 1445 aa39.15■■■■□ 3.86
U2AF1-202ENST00000380276 ARID3CA6NKF2 412 aa39.14■■■■□ 3.86
U2AF1-202ENST00000380276 CFAP43Q8NDM7 1665 aa39.13■■■■□ 3.86
U2AF1-202ENST00000380276 MAGI3Q5TCQ9 1506 aa39.06■■■■□ 3.84
U2AF1-202ENST00000380276 CSRNP3Q8WYN3 585 aa39.03■■■■□ 3.84
U2AF1-202ENST00000380276 ATP10BO94823 1461 aa38.94■■■■□ 3.82
U2AF1-202ENST00000380276 RANGAP1P46060 587 aaPredicted RBP38.93■■■■□ 3.82
U2AF1-202ENST00000380276 SAMD9Q5K651 1589 aa38.91■■■■□ 3.82
U2AF1-202ENST00000380276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.89■■■■□ 3.82
U2AF1-202ENST00000380276 HNRNPUL2Q1KMD3 747 aaKnown RBP38.89■■■■□ 3.82
U2AF1-202ENST00000380276 RAPGEF6Q8TEU7 1601 aa38.86■■■■□ 3.81
U2AF1-202ENST00000380276 EEA1Q15075 1411 aa38.8■■■■□ 3.8
U2AF1-202ENST00000380276 KIF21BO75037 1637 aa38.78■■■■□ 3.8
U2AF1-202ENST00000380276 ABCA9Q8IUA7 1624 aa38.78■■■■□ 3.8
U2AF1-202ENST00000380276 ARAP3Q8WWN8 1544 aa38.75■■■■□ 3.79
U2AF1-202ENST00000380276 HECW2Q9P2P5 1572 aa38.74■■■■□ 3.79
U2AF1-202ENST00000380276 FHOD3Q2V2M9 1422 aa38.72■■■■□ 3.79
U2AF1-202ENST00000380276 NUP153P49790 1475 aaKnown RBP38.66■■■■□ 3.78
U2AF1-202ENST00000380276 PHLDB1Q86UU1 1377 aa38.65■■■■□ 3.78
U2AF1-202ENST00000380276 RAPGEF3O95398 923 aa38.61■■■■□ 3.77
U2AF1-202ENST00000380276 NEO1Q92859 1461 aa38.59■■■■□ 3.77
U2AF1-202ENST00000380276 ILDR1Q86SU0 546 aaPredicted RBP38.55■■■■□ 3.76
U2AF1-202ENST00000380276 PLEKHD1A6NEE1 506 aa38.54■■■■□ 3.76
U2AF1-202ENST00000380276 EHMT2Q96KQ7 1210 aa38.51■■■■□ 3.76
U2AF1-202ENST00000380276 EFCAB5A4FU69 1503 aa38.51■■■■□ 3.76
U2AF1-202ENST00000380276 ARID4BQ4LE39 1312 aaPredicted RBP38.46■■■■□ 3.75
U2AF1-202ENST00000380276 FRMPD1Q5SYB0 1578 aa38.46■■■■□ 3.75
U2AF1-202ENST00000380276 ADAMTSL3P82987 1691 aa38.39■■■■□ 3.74
U2AF1-202ENST00000380276 CFAP74Q9C0B2 1584 aa38.37■■■■□ 3.73
U2AF1-202ENST00000380276 DENND4BO75064 1496 aaPredicted RBP38.37■■■■□ 3.73
U2AF1-202ENST00000380276 UBTFP17480 764 aaKnown RBP38.37■■■■□ 3.73
U2AF1-202ENST00000380276 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.37■■■■□ 3.739e-12■■■■■ 76.3
U2AF1-202ENST00000380276 FANCAO15360 1455 aa38.36■■■■□ 3.73
U2AF1-202ENST00000380276 PTPRMP28827 1452 aa38.36■■■■□ 3.73
U2AF1-202ENST00000380276 AKNAQ7Z591 1439 aa38.36■■■■□ 3.73
U2AF1-202ENST00000380276 CDK13Q14004 1512 aaKnown RBP38.35■■■■□ 3.73
U2AF1-202ENST00000380276 ATP1B4Q9UN42 357 aaPredicted RBP38.34■■■■□ 3.73
U2AF1-202ENST00000380276 TTC37Q6PGP7 1564 aa38.34■■■■□ 3.73
U2AF1-202ENST00000380276 BCORL1Q5H9F3 1711 aa38.33■■■■□ 3.73
U2AF1-202ENST00000380276 RICTORQ6R327 1708 aa38.3■■■■□ 3.72
U2AF1-202ENST00000380276 ARHGEF40Q8TER5 1519 aa38.3■■■■□ 3.72
U2AF1-202ENST00000380276 MADDQ8WXG6 1647 aa38.28■■■■□ 3.72
U2AF1-202ENST00000380276 HECW1Q76N89 1606 aa38.2■■■■□ 3.7
U2AF1-202ENST00000380276 FMN1Q68DA7 1419 aa38.19■■■■□ 3.7
U2AF1-202ENST00000380276 RIMS1Q86UR5 1692 aaKnown RBP38.17■■■■□ 3.7
U2AF1-202ENST00000380276 ZFYVE16Q7Z3T8 1539 aa38.16■■■■□ 3.7
U2AF1-202ENST00000380276 PLPPR3Q6T4P5 718 aa38.15■■■■□ 3.7
U2AF1-202ENST00000380276 ARHGAP35Q9NRY4 1499 aa38.14■■■■□ 3.7
U2AF1-202ENST00000380276 ZMYM4Q5VZL5 1548 aa38.13■■■■□ 3.69
U2AF1-202ENST00000380276 CHIC1Q5VXU3 224 aa38.12■■■■□ 3.69
U2AF1-202ENST00000380276 POGZQ7Z3K3 1410 aa38.11■■■■□ 3.69
U2AF1-202ENST00000380276 YEATS2Q9ULM3 1422 aa38.11■■■■□ 3.69
U2AF1-202ENST00000380276 PLCH2O75038 1416 aa38.1■■■■□ 3.69
U2AF1-202ENST00000380276 SCAPERQ9BY12 1400 aa38.1■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms