RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 PLPPR3Q6T4P5 718 aa26.76■■□□□ 1.87
PCDH8-202ENST00000377942 FHAD1B1AJZ9 1412 aa26.75■■□□□ 1.87
PCDH8-202ENST00000377942 KDM2AQ9Y2K7 1162 aa26.73■■□□□ 1.87
PCDH8-202ENST00000377942 EIF4G2P78344 907 aaKnown RBP eCLIP26.65■■□□□ 1.86
PCDH8-202ENST00000377942 TMC1Q8TDI8 760 aa26.62■■□□□ 1.85
PCDH8-202ENST00000377942 SOGA1O94964 1423 aa26.61■■□□□ 1.85
PCDH8-202ENST00000377942 TOP2AP11388 1531 aaKnown RBP26.6■■□□□ 1.85
PCDH8-202ENST00000377942 HNRNPUQ00839 825 aaKnown RBP eCLIP26.59■■□□□ 1.85
PCDH8-202ENST00000377942 FAM9BQ8IZU0 186 aa26.56■■□□□ 1.84
PCDH8-202ENST00000377942 CCNB3Q8WWL7 1395 aa26.54■■□□□ 1.84
PCDH8-202ENST00000377942 EIF4G1Q04637 1599 aaKnown RBP26.53■■□□□ 1.84
PCDH8-202ENST00000377942 PPP1R15AO75807 674 aaPredicted RBP26.53■■□□□ 1.84
PCDH8-202ENST00000377942 CADPSQ9ULU8 1353 aa26.51■■□□□ 1.83
PCDH8-202ENST00000377942 WDR43Q15061 677 aaKnown RBP eCLIP26.51■■□□□ 1.83
PCDH8-202ENST00000377942 MRS2Q9HD23 443 aa26.46■■□□□ 1.83
PCDH8-202ENST00000377942 CARMIL2Q6F5E8 1435 aa26.46■■□□□ 1.83
PCDH8-202ENST00000377942 ATAD2BQ9ULI0 1458 aa26.44■■□□□ 1.82
PCDH8-202ENST00000377942 CDCA8Q53HL2 280 aa26.44■■□□□ 1.82
PCDH8-202ENST00000377942 ABCC8Q09428 1581 aa26.43■■□□□ 1.82
PCDH8-202ENST00000377942 RGL3Q3MIN7 710 aa26.43■■□□□ 1.82
PCDH8-202ENST00000377942 WIZO95785 1651 aa26.41■■□□□ 1.82
PCDH8-202ENST00000377942 BCL11AQ9H165 835 aa26.41■■□□□ 1.82
PCDH8-202ENST00000377942 ARID4BQ4LE39 1312 aaPredicted RBP26.41■■□□□ 1.82
PCDH8-202ENST00000377942 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.4■■□□□ 1.82
PCDH8-202ENST00000377942 VPS8Q8N3P4 1428 aa26.39■■□□□ 1.81
PCDH8-202ENST00000377942 TDRD9Q8NDG6 1382 aaKnown RBP26.38■■□□□ 1.81
PCDH8-202ENST00000377942 FKBP8Q14318 412 aa26.34■■□□□ 1.81
PCDH8-202ENST00000377942 SMARCA4P51532 1647 aa26.33■■□□□ 1.81
PCDH8-202ENST00000377942 SALL2Q9Y467 1007 aaPredicted RBP26.32■■□□□ 1.8
PCDH8-202ENST00000377942 ANP32AP39687 249 aaKnown RBP26.32■■□□□ 1.8
PCDH8-202ENST00000377942 FMN1Q68DA7 1419 aa26.32■■□□□ 1.8
PCDH8-202ENST00000377942 HIRIP3Q9BW71 556 aaPredicted RBP26.31■■□□□ 1.8
PCDH8-202ENST00000377942 CARD11Q9BXL7 1154 aa26.28■■□□□ 1.8
PCDH8-202ENST00000377942 KANK1Q14678 1352 aa26.26■■□□□ 1.79
PCDH8-202ENST00000377942 ARHGAP35Q9NRY4 1499 aa26.25■■□□□ 1.79
PCDH8-202ENST00000377942 TIMELESSQ9UNS1 1208 aa26.24■■□□□ 1.79
PCDH8-202ENST00000377942 C14orf37Q86TY3 774 aa26.21■■□□□ 1.79
PCDH8-202ENST00000377942 MIER1Q8N108 512 aa26.21■■□□□ 1.79
PCDH8-202ENST00000377942 RAPGEF2Q9Y4G8 1499 aa26.2■■□□□ 1.78
PCDH8-202ENST00000377942 CFAP53Q96M91 514 aa26.2■■□□□ 1.78
PCDH8-202ENST00000377942 KNSTRNQ9Y448 316 aa26.2■■□□□ 1.78
PCDH8-202ENST00000377942 UPF2Q9HAU5 1272 aaKnown RBP26.18■■□□□ 1.78
PCDH8-202ENST00000377942 SCAF1Q9H7N4 1312 aaKnown RBP26.16■■□□□ 1.78
PCDH8-202ENST00000377942 CCDC136Q96JN2 1154 aa26.14■■□□□ 1.78
PCDH8-202ENST00000377942 SIN3AQ96ST3 1273 aa26.14■■□□□ 1.78
PCDH8-202ENST00000377942 SETD5Q9C0A6 1442 aa26.12■■□□□ 1.77
PCDH8-202ENST00000377942 EFCAB2Q5VUJ9 269 aa26.12■■□□□ 1.77
PCDH8-202ENST00000377942 SENP3Q9H4L4 574 aaPredicted RBP26.11■■□□□ 1.77
PCDH8-202ENST00000377942 HDGFP51858 240 aaKnown RBP26.1■■□□□ 1.77
PCDH8-202ENST00000377942 POGKQ9P215 609 aa26.1■■□□□ 1.77
PCDH8-202ENST00000377942 FANCD2Q9BXW9 1451 aa26.09■■□□□ 1.77
PCDH8-202ENST00000377942 KANK4Q5T7N3 995 aaPredicted RBP26.07■■□□□ 1.76
PCDH8-202ENST00000377942 NPM2Q86SE8 214 aaKnown RBP26.06■■□□□ 1.76
PCDH8-202ENST00000377942 TRHP20396 242 aaPredicted RBP26.02■■□□□ 1.76
PCDH8-202ENST00000377942 DCAF11Q8TEB1 546 aa26.01■■□□□ 1.75
PCDH8-202ENST00000377942 MYH16Q9H6N6 1097 aa25.99■■□□□ 1.75
PCDH8-202ENST00000377942 ZBTB7CA1YPR0 619 aa25.99■■□□□ 1.75
PCDH8-202ENST00000377942 JPH4Q96JJ6 628 aa25.99■■□□□ 1.75
PCDH8-202ENST00000377942 HSP90AA1P07900 732 aaKnown RBP25.99■■□□□ 1.75
PCDH8-202ENST00000377942 RSPH4AQ5TD94 716 aa25.98■■□□□ 1.75
PCDH8-202ENST00000377942 ANKRD30AQ9BXX3 1397 aa25.98■■□□□ 1.75
PCDH8-202ENST00000377942 TMF1P82094 1093 aa25.97■■□□□ 1.75
PCDH8-202ENST00000377942 NUDCQ9Y266 331 aa25.97■■□□□ 1.75
PCDH8-202ENST00000377942 PKD2Q13563 968 aa25.94■■□□□ 1.74
PCDH8-202ENST00000377942 FHOD3Q2V2M9 1422 aa25.93■■□□□ 1.74
PCDH8-202ENST00000377942 HAP1P54257 671 aaPredicted RBP25.93■■□□□ 1.74
PCDH8-202ENST00000377942 GGT6Q6P531 493 aa25.92■■□□□ 1.74
PCDH8-202ENST00000377942 CCDC18Q5T9S5 1454 aa25.92■■□□□ 1.74
PCDH8-202ENST00000377942 NCAPD3P42695 1498 aa25.92■■□□□ 1.74
PCDH8-202ENST00000377942 MLECQ14165 292 aa25.9■■□□□ 1.74
PCDH8-202ENST00000377942 PPM1GO15355 546 aaPredicted RBP25.87■■□□□ 1.73
PCDH8-202ENST00000377942 MAPK8IP3Q9UPT6 1336 aa25.87■■□□□ 1.73
PCDH8-202ENST00000377942 PLEKHG5O94827 1062 aa25.86■■□□□ 1.73
PCDH8-202ENST00000377942 NUP155O75694 1391 aa25.85■■□□□ 1.73
PCDH8-202ENST00000377942 A0A0G2JS52 829 aa25.83■■□□□ 1.73
PCDH8-202ENST00000377942 MPHOSPH9Q99550 1183 aa25.83■■□□□ 1.73
PCDH8-202ENST00000377942 RAB3GAP2Q9H2M9 1393 aa25.82■■□□□ 1.72
PCDH8-202ENST00000377942 PNNQ9H307 717 aaKnown RBP25.81■■□□□ 1.72
PCDH8-202ENST00000377942 SPAG9O60271 1321 aaKnown RBP25.77■■□□□ 1.72
PCDH8-202ENST00000377942 FGD5Q6ZNL6 1462 aa25.75■■□□□ 1.71
PCDH8-202ENST00000377942 PTPRGP23470 1445 aa25.74■■□□□ 1.71
PCDH8-202ENST00000377942 GAPVD1Q14C86 1478 aa25.74■■□□□ 1.71
PCDH8-202ENST00000377942 IRX6P78412 446 aaPredicted RBP25.74■■□□□ 1.71
PCDH8-202ENST00000377942 SRPK2P78362 688 aaKnown RBP25.73■■□□□ 1.71
PCDH8-202ENST00000377942 LMOD2Q6P5Q4 547 aa25.73■■□□□ 1.71
PCDH8-202ENST00000377942 KIF3BO15066 747 aa25.73■■□□□ 1.71
PCDH8-202ENST00000377942 HNRNPMP52272 730 aaKnown RBP eCLIP25.73■■□□□ 1.71
PCDH8-202ENST00000377942 CC2D1BQ5T0F9 858 aaKnown RBP25.73■■□□□ 1.71
PCDH8-202ENST00000377942 ANP32BQ92688 251 aaKnown RBP25.72■■□□□ 1.71
PCDH8-202ENST00000377942 HSPA5P11021 654 aaKnown RBP25.7■■□□□ 1.71
PCDH8-202ENST00000377942 RUSC2Q8N2Y8 1516 aa25.7■■□□□ 1.7
PCDH8-202ENST00000377942 IGF1RP08069 1367 aa25.7■■□□□ 1.7
PCDH8-202ENST00000377942 NEUROD2Q15784 382 aa25.68■■□□□ 1.7
PCDH8-202ENST00000377942 FOXD1Q16676 465 aa25.67■■□□□ 1.7
PCDH8-202ENST00000377942 TNNT2P45379 298 aaPredicted RBP25.66■■□□□ 1.7
PCDH8-202ENST00000377942 FTSJ3Q8IY81 847 aaKnown RBP25.66■■□□□ 1.7
PCDH8-202ENST00000377942 CHMP4BQ9H444 224 aaKnown RBP25.66■■□□□ 1.7
PCDH8-202ENST00000377942 CCER2I3L3R5 266 aa25.65■■□□□ 1.7
PCDH8-202ENST00000377942 U2SURPO15042 1029 aaKnown RBP25.65■■□□□ 1.7
PCDH8-202ENST00000377942 MS4A1P11836 297 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms