RNA–Protein interactions for RNA: ENST00000377595.7

UCHL3-201, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UCHL3, Length 844 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-201ENST00000377595 KIF27Q86VH2 1401 aa26.53■■□□□ 1.84
UCHL3-201ENST00000377595 SHROOM2Q13796 1616 aa26.51■■□□□ 1.83
UCHL3-201ENST00000377595 NPM1P06748 294 aaKnown RBP eCLIP26.42■■□□□ 1.82
UCHL3-201ENST00000377595 CARMIL1Q5VZK9 1371 aa26.39■■□□□ 1.82
UCHL3-201ENST00000377595 KIAA0586Q9BVV6 1533 aa26.38■■□□□ 1.81
UCHL3-201ENST00000377595 RUSC2Q8N2Y8 1516 aa26.34■■□□□ 1.81
UCHL3-201ENST00000377595 TTBK1Q5TCY1 1321 aaPredicted RBP26.3■■□□□ 1.8
UCHL3-201ENST00000377595 CUL7Q14999 1698 aa26.28■■□□□ 1.8
UCHL3-201ENST00000377595 FAM69CQ0P6D2 419 aa26.28■■□□□ 1.8
UCHL3-201ENST00000377595 PTPRGP23470 1445 aa26.22■■□□□ 1.79
UCHL3-201ENST00000377595 CARMIL2Q6F5E8 1435 aa26.16■■□□□ 1.78
UCHL3-201ENST00000377595 ABCC10Q5T3U5 1492 aa26.13■■□□□ 1.77
UCHL3-201ENST00000377595 TNIKQ9UKE5 1360 aa26.13■■□□□ 1.77
UCHL3-201ENST00000377595 ADCY10Q96PN6 1610 aa26.11■■□□□ 1.77
UCHL3-201ENST00000377595 RAPGEF2Q9Y4G8 1499 aa26.09■■□□□ 1.77
UCHL3-201ENST00000377595 MAPKBP1O60336 1514 aa26.08■■□□□ 1.77
UCHL3-201ENST00000377595 KIF13AQ9H1H9 1805 aa26.05■■□□□ 1.76
UCHL3-201ENST00000377595 IQGAP2Q13576 1575 aa26.04■■□□□ 1.76
UCHL3-201ENST00000377595 DISP1Q96F81 1524 aa25.97■■□□□ 1.75
UCHL3-201ENST00000377595 UACAQ9BZF9 1416 aa25.97■■□□□ 1.75
UCHL3-201ENST00000377595 DIP2BQ9P265 1576 aa25.96■■□□□ 1.75
UCHL3-201ENST00000377595 ABCC2Q92887 1545 aa25.95■■□□□ 1.74
UCHL3-201ENST00000377595 ASXL2Q76L83 1435 aa25.9■■□□□ 1.74
UCHL3-201ENST00000377595 UGGT2Q9NYU1 1516 aa25.9■■□□□ 1.74
UCHL3-201ENST00000377595 UHRF1BP1LA0JNW5 1464 aa25.9■■□□□ 1.74
UCHL3-201ENST00000377595 PLB1Q6P1J6 1458 aa25.88■■□□□ 1.73
UCHL3-201ENST00000377595 PRXQ9BXM0 1461 aa25.8■■□□□ 1.72
UCHL3-201ENST00000377595 CSRNP3Q8WYN3 585 aa25.79■■□□□ 1.72
UCHL3-201ENST00000377595 KDM5BQ9UGL1 1544 aa25.78■■□□□ 1.72
UCHL3-201ENST00000377595 TSPOAP1O95153 1857 aa25.78■■□□□ 1.72
UCHL3-201ENST00000377595 KIAA0556O60303 1618 aa25.77■■□□□ 1.72
UCHL3-201ENST00000377595 FAM9AQ8IZU1 332 aaPredicted RBP25.77■■□□□ 1.72
UCHL3-201ENST00000377595 GOLGA3Q08378 1498 aa25.76■■□□□ 1.71
UCHL3-201ENST00000377595 KDM6BO15054 1643 aa25.76■■□□□ 1.71
UCHL3-201ENST00000377595 P3H3Q8IVL6 736 aa25.75■■□□□ 1.71
UCHL3-201ENST00000377595 KCNH8Q96L42 1107 aa25.72■■□□□ 1.71
UCHL3-201ENST00000377595 GLI2P10070 1586 aa25.72■■□□□ 1.71
UCHL3-201ENST00000377595 EPRSP07814 1512 aaKnown RBP25.71■■□□□ 1.71
UCHL3-201ENST00000377595 KDM4FA0A1W2PPD8 638 aa25.67■■□□□ 1.7
UCHL3-201ENST00000377595 CTTNBP2Q8WZ74 1663 aa25.65■■□□□ 1.7
UCHL3-201ENST00000377595 ZCCHC11Q5TAX3 1644 aaKnown RBP25.65■■□□□ 1.7
UCHL3-201ENST00000377595 ARID3CA6NKF2 412 aa25.64■■□□□ 1.7
UCHL3-201ENST00000377595 RANGAP1P46060 587 aaPredicted RBP25.62■■□□□ 1.69
UCHL3-201ENST00000377595 WDR7Q9Y4E6 1490 aa25.61■■□□□ 1.69
UCHL3-201ENST00000377595 TEX14Q8IWB6 1497 aa25.58■■□□□ 1.69
UCHL3-201ENST00000377595 COL17A1Q9UMD9 1497 aaPredicted RBP25.58■■□□□ 1.69
UCHL3-201ENST00000377595 ABCA8O94911 1581 aa25.57■■□□□ 1.68
UCHL3-201ENST00000377595 PPRC1Q5VV67 1664 aaKnown RBP25.56■■□□□ 1.68
UCHL3-201ENST00000377595 CD109Q6YHK3 1445 aa25.54■■□□□ 1.68
UCHL3-201ENST00000377595 EEA1Q15075 1411 aa25.53■■□□□ 1.68
UCHL3-201ENST00000377595 MAP3K4Q9Y6R4 1608 aa25.52■■□□□ 1.68
UCHL3-201ENST00000377595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.51■■□□□ 1.67
UCHL3-201ENST00000377595 HNRNPUL2Q1KMD3 747 aaKnown RBP25.51■■□□□ 1.67
UCHL3-201ENST00000377595 ATP10BO94823 1461 aa25.48■■□□□ 1.67
UCHL3-201ENST00000377595 MAGI3Q5TCQ9 1506 aa25.42■■□□□ 1.66
UCHL3-201ENST00000377595 EHMT2Q96KQ7 1210 aa25.42■■□□□ 1.66
UCHL3-201ENST00000377595 SAMD9Q5K651 1589 aa25.36■■□□□ 1.65
UCHL3-201ENST00000377595 ADGRL1O94910 1474 aa25.35■■□□□ 1.65
UCHL3-201ENST00000377595 UBTFP17480 764 aaKnown RBP25.35■■□□□ 1.65
UCHL3-201ENST00000377595 FHOD3Q2V2M9 1422 aa25.35■■□□□ 1.65
UCHL3-201ENST00000377595 CFAP43Q8NDM7 1665 aa25.34■■□□□ 1.65
UCHL3-201ENST00000377595 PLEKHD1A6NEE1 506 aa25.33■■□□□ 1.65
UCHL3-201ENST00000377595 RAPGEF6Q8TEU7 1601 aa25.3■■□□□ 1.64
UCHL3-201ENST00000377595 NUP153P49790 1475 aaKnown RBP25.27■■□□□ 1.64
UCHL3-201ENST00000377595 PHLDB1Q86UU1 1377 aa25.26■■□□□ 1.63
UCHL3-201ENST00000377595 RAPGEF3O95398 923 aa25.25■■□□□ 1.63
UCHL3-201ENST00000377595 ARAP3Q8WWN8 1544 aa25.23■■□□□ 1.63
UCHL3-201ENST00000377595 ATP1B4Q9UN42 357 aaPredicted RBP25.23■■□□□ 1.63
UCHL3-201ENST00000377595 KIF21BO75037 1637 aa25.21■■□□□ 1.63
UCHL3-201ENST00000377595 ABCA9Q8IUA7 1624 aa25.19■■□□□ 1.62
UCHL3-201ENST00000377595 EFCAB5A4FU69 1503 aa25.16■■□□□ 1.62
UCHL3-201ENST00000377595 NEO1Q92859 1461 aa25.15■■□□□ 1.62
UCHL3-201ENST00000377595 ARID4BQ4LE39 1312 aaPredicted RBP25.09■■□□□ 1.61
UCHL3-201ENST00000377595 AKNAQ7Z591 1439 aa25.05■■□□□ 1.6
UCHL3-201ENST00000377595 CDK11AQ9UQ88 783 aaPredicted RBP25.05■■□□□ 1.6
UCHL3-201ENST00000377595 FMN1Q68DA7 1419 aa25.04■■□□□ 1.6
UCHL3-201ENST00000377595 CDK13Q14004 1512 aaKnown RBP25.02■■□□□ 1.6
UCHL3-201ENST00000377595 DENND4BO75064 1496 aaPredicted RBP25.02■■□□□ 1.6
UCHL3-201ENST00000377595 ARHGAP35Q9NRY4 1499 aa25.02■■□□□ 1.6
UCHL3-201ENST00000377595 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.02■■□□□ 1.6
UCHL3-201ENST00000377595 FANCAO15360 1455 aa25.01■■□□□ 1.59
UCHL3-201ENST00000377595 SENP3Q9H4L4 574 aaPredicted RBP25■■□□□ 1.59
UCHL3-201ENST00000377595 EFCAB2Q5VUJ9 269 aa24.95■■□□□ 1.58
UCHL3-201ENST00000377595 PLCH2O75038 1416 aa24.95■■□□□ 1.58
UCHL3-201ENST00000377595 HECW2Q9P2P5 1572 aa24.93■■□□□ 1.58
UCHL3-201ENST00000377595 FRMPD1Q5SYB0 1578 aa24.92■■□□□ 1.58
UCHL3-201ENST00000377595 TTC37Q6PGP7 1564 aa24.91■■□□□ 1.58
UCHL3-201ENST00000377595 SCAPERQ9BY12 1400 aa24.9■■□□□ 1.58
UCHL3-201ENST00000377595 PTPRMP28827 1452 aa24.89■■□□□ 1.57
UCHL3-201ENST00000377595 HECW1Q76N89 1606 aa24.88■■□□□ 1.57
UCHL3-201ENST00000377595 ILDR1Q86SU0 546 aaPredicted RBP24.87■■□□□ 1.57
UCHL3-201ENST00000377595 CFAP74Q9C0B2 1584 aa24.86■■□□□ 1.57
UCHL3-201ENST00000377595 MLECQ14165 292 aa24.85■■□□□ 1.57
UCHL3-201ENST00000377595 PLPPR3Q6T4P5 718 aa24.84■■□□□ 1.57
UCHL3-201ENST00000377595 TROQ12816 1431 aaPredicted RBP24.84■■□□□ 1.57
UCHL3-201ENST00000377595 ADAMTSL3P82987 1691 aa24.83■■□□□ 1.57
UCHL3-201ENST00000377595 YEATS2Q9ULM3 1422 aa24.83■■□□□ 1.57
UCHL3-201ENST00000377595 CLIP1P30622 1438 aa24.82■■□□□ 1.56
UCHL3-201ENST00000377595 MYT1LQ9UL68 1186 aa24.82■■□□□ 1.56
UCHL3-201ENST00000377595 RICTORQ6R327 1708 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms