RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 LOC105371045A0A1W2PR82 267 aa34.79■■■■□ 3.16
CBWD3-202ENST00000377342 KIAA0586Q9BVV6 1533 aa34.75■■■■□ 3.15
CBWD3-202ENST00000377342 IQGAP2Q13576 1575 aa34.74■■■■□ 3.15
CBWD3-202ENST00000377342 UBTFP17480 764 aaKnown RBP34.71■■■■□ 3.15
CBWD3-202ENST00000377342 TNIKQ9UKE5 1360 aa34.68■■■■□ 3.14
CBWD3-202ENST00000377342 SHROOM2Q13796 1616 aa34.65■■■■□ 3.14
CBWD3-202ENST00000377342 OSCARQ8IYS5 282 aa34.64■■■■□ 3.14
CBWD3-202ENST00000377342 UGGT2Q9NYU1 1516 aa34.57■■■■□ 3.12
CBWD3-202ENST00000377342 SAMD9Q5K651 1589 aa34.5■■■■□ 3.11
CBWD3-202ENST00000377342 CEP162Q5TB80 1403 aa34.46■■■■□ 3.11
CBWD3-202ENST00000377342 DISP1Q96F81 1524 aa34.44■■■■□ 3.1
CBWD3-202ENST00000377342 JPH4Q96JJ6 628 aa34.44■■■■□ 3.1
CBWD3-202ENST00000377342 KIAA0556O60303 1618 aa34.43■■■■□ 3.1
CBWD3-202ENST00000377342 EFCAB5A4FU69 1503 aa34.42■■■■□ 3.1
CBWD3-202ENST00000377342 ERCC6L2Q5T890 1561 aa34.42■■■■□ 3.1
CBWD3-202ENST00000377342 ARHGAP35Q9NRY4 1499 aa34.39■■■■□ 3.1
CBWD3-202ENST00000377342 PRG4Q92954 1404 aaPredicted RBP34.39■■■■□ 3.1
CBWD3-202ENST00000377342 RANGAP1P46060 587 aaPredicted RBP34.38■■■■□ 3.09
CBWD3-202ENST00000377342 CLIP1P30622 1438 aa34.38■■■■□ 3.09
CBWD3-202ENST00000377342 CARMIL2Q6F5E8 1435 aa34.28■■■■□ 3.08
CBWD3-202ENST00000377342 ARHGEF11O15085 1522 aa34.27■■■■□ 3.08
CBWD3-202ENST00000377342 ARAP1Q96P48 1450 aa34.26■■■■□ 3.08
CBWD3-202ENST00000377342 FHOD3Q2V2M9 1422 aa34.25■■■■□ 3.07
CBWD3-202ENST00000377342 RIMBP3CA6NJZ7 1639 aa34.22■■■■□ 3.07
CBWD3-202ENST00000377342 RIMBP3BA6NNM3 1639 aa34.22■■■■□ 3.07
CBWD3-202ENST00000377342 RIMBP3Q9UFD9 1639 aa34.22■■■■□ 3.07
CBWD3-202ENST00000377342 P3H3Q8IVL6 736 aa34.19■■■■□ 3.06
CBWD3-202ENST00000377342 PTPRGP23470 1445 aa34.03■■■■□ 3.04
CBWD3-202ENST00000377342 FMN1Q68DA7 1419 aa34.01■■■■□ 3.04
CBWD3-202ENST00000377342 PCF11O94913 1555 aaKnown RBP34.01■■■■□ 3.03
CBWD3-202ENST00000377342 ABCA8O94911 1581 aa33.98■■■■□ 3.03
CBWD3-202ENST00000377342 TTBK1Q5TCY1 1321 aaPredicted RBP33.98■■■■□ 3.03
CBWD3-202ENST00000377342 VPS8Q8N3P4 1428 aa33.98■■■■□ 3.03
CBWD3-202ENST00000377342 PLB1Q6P1J6 1458 aa33.97■■■■□ 3.03
CBWD3-202ENST00000377342 RAPGEF6Q8TEU7 1601 aa33.96■■■■□ 3.03
CBWD3-202ENST00000377342 DNAJC5Q9H3Z4 198 aa33.96■■■■□ 3.03
CBWD3-202ENST00000377342 ADCY10Q96PN6 1610 aa33.88■■■■□ 3.01
CBWD3-202ENST00000377342 LRRIQ1Q96JM4 1722 aa33.88■■■■□ 3.01
CBWD3-202ENST00000377342 CASKIN1Q8WXD9 1431 aa33.88■■■■□ 3.01
CBWD3-202ENST00000377342 FYCO1Q9BQS8 1478 aa33.87■■■■□ 3.01
CBWD3-202ENST00000377342 ABCC2Q92887 1545 aa33.87■■■■□ 3.01
CBWD3-202ENST00000377342 HECW1Q76N89 1606 aa33.86■■■■□ 3.01
CBWD3-202ENST00000377342 UACAQ9BZF9 1416 aa33.86■■■■□ 3.01
CBWD3-202ENST00000377342 UHRF1BP1LA0JNW5 1464 aa33.83■■■■□ 3.01
CBWD3-202ENST00000377342 NUP153P49790 1475 aaKnown RBP33.83■■■■□ 3.01
CBWD3-202ENST00000377342 CYB5RLQ6IPT4 315 aa33.75■■■□□ 2.99
CBWD3-202ENST00000377342 EPRSP07814 1512 aaKnown RBP33.71■■■□□ 2.99
CBWD3-202ENST00000377342 CFAP43Q8NDM7 1665 aa33.7■■■□□ 2.99
CBWD3-202ENST00000377342 CDK13Q14004 1512 aaKnown RBP33.7■■■□□ 2.99
CBWD3-202ENST00000377342 ZCCHC11Q5TAX3 1644 aaKnown RBP33.7■■■□□ 2.98
CBWD3-202ENST00000377342 KDM5BQ9UGL1 1544 aa33.69■■■□□ 2.98
CBWD3-202ENST00000377342 CCDC18Q5T9S5 1454 aa33.66■■■□□ 2.98
CBWD3-202ENST00000377342 ATP10BO94823 1461 aa33.64■■■□□ 2.98
CBWD3-202ENST00000377342 TIAM1Q13009 1591 aa33.63■■■□□ 2.97
CBWD3-202ENST00000377342 ATP1B4Q9UN42 357 aaPredicted RBP33.63■■■□□ 2.97
CBWD3-202ENST00000377342 ARID3CA6NKF2 412 aa33.61■■■□□ 2.97
CBWD3-202ENST00000377342 MAP3K1Q13233 1512 aa33.58■■■□□ 2.97
CBWD3-202ENST00000377342 MAGI3Q5TCQ9 1506 aa33.53■■■□□ 2.96
CBWD3-202ENST00000377342 MAPKBP1O60336 1514 aa33.46■■■□□ 2.95
CBWD3-202ENST00000377342 LRRC9Q6ZRR7 1453 aa33.42■■■□□ 2.94
CBWD3-202ENST00000377342 EHBP1L1Q8N3D4 1523 aa33.41■■■□□ 2.94
CBWD3-202ENST00000377342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.41■■■□□ 2.94
CBWD3-202ENST00000377342 HNRNPUL2Q1KMD3 747 aaKnown RBP33.41■■■□□ 2.94
CBWD3-202ENST00000377342 ASXL2Q76L83 1435 aa33.39■■■□□ 2.94
CBWD3-202ENST00000377342 NPM1P06748 294 aaKnown RBP eCLIP33.38■■■□□ 2.93
CBWD3-202ENST00000377342 APLP2Q06481 763 aa33.38■■■□□ 2.93
CBWD3-202ENST00000377342 WDR7Q9Y4E6 1490 aa33.37■■■□□ 2.93
CBWD3-202ENST00000377342 TROQ12816 1431 aaPredicted RBP33.37■■■□□ 2.93
CBWD3-202ENST00000377342 KANK4Q5T7N3 995 aaPredicted RBP33.36■■■□□ 2.93
CBWD3-202ENST00000377342 KIF14Q15058 1648 aa33.34■■■□□ 2.93
CBWD3-202ENST00000377342 MTUS2Q5JR59 1369 aa33.32■■■□□ 2.92
CBWD3-202ENST00000377342 CDK11AQ9UQ88 783 aaPredicted RBP33.3■■■□□ 2.92
CBWD3-202ENST00000377342 PLEKHD1A6NEE1 506 aa33.28■■■□□ 2.92
CBWD3-202ENST00000377342 SUPT6HQ7KZ85 1726 aaKnown RBP33.28■■■□□ 2.92
CBWD3-202ENST00000377342 PPARGC1BQ86YN6 1023 aaKnown RBP33.22■■■□□ 2.91
CBWD3-202ENST00000377342 TTC37Q6PGP7 1564 aa33.21■■■□□ 2.91
CBWD3-202ENST00000377342 DIP2BQ9P265 1576 aa33.21■■■□□ 2.91
CBWD3-202ENST00000377342 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.2■■■□□ 2.9
CBWD3-202ENST00000377342 NCOA2Q15596 1464 aa33.19■■■□□ 2.9
CBWD3-202ENST00000377342 ABCC10Q5T3U5 1492 aa33.18■■■□□ 2.9
CBWD3-202ENST00000377342 ABCA9Q8IUA7 1624 aa33.18■■■□□ 2.9
CBWD3-202ENST00000377342 KIF13AQ9H1H9 1805 aa33.17■■■□□ 2.9
CBWD3-202ENST00000377342 GLI2P10070 1586 aa33.13■■■□□ 2.89
CBWD3-202ENST00000377342 KCNH8Q96L42 1107 aa33.13■■■□□ 2.89
CBWD3-202ENST00000377342 CDC42BPAQ5VT25 1732 aa33.11■■■□□ 2.89
CBWD3-202ENST00000377342 MYO5CQ9NQX4 1742 aa33.08■■■□□ 2.89
CBWD3-202ENST00000377342 MAP3K4Q9Y6R4 1608 aa33.08■■■□□ 2.89
CBWD3-202ENST00000377342 PREX2Q70Z35 1606 aa33.06■■■□□ 2.88
CBWD3-202ENST00000377342 ITSN2Q9NZM3 1697 aa33.06■■■□□ 2.88
CBWD3-202ENST00000377342 PHLDB1Q86UU1 1377 aa33.05■■■□□ 2.88
CBWD3-202ENST00000377342 CDC42BPBQ9Y5S2 1711 aa33.03■■■□□ 2.88
CBWD3-202ENST00000377342 GPATCH8Q9UKJ3 1502 aaKnown RBP33.01■■■□□ 2.87
CBWD3-202ENST00000377342 MYOM3Q5VTT5 1437 aa32.98■■■□□ 2.87
CBWD3-202ENST00000377342 CCNB3Q8WWL7 1395 aa32.98■■■□□ 2.87
CBWD3-202ENST00000377342 PPRC1Q5VV67 1664 aaKnown RBP32.95■■■□□ 2.87
CBWD3-202ENST00000377342 ARAP3Q8WWN8 1544 aa32.95■■■□□ 2.86
CBWD3-202ENST00000377342 FAM69CQ0P6D2 419 aa32.94■■■□□ 2.86
CBWD3-202ENST00000377342 PLCH2O75038 1416 aa32.92■■■□□ 2.86
CBWD3-202ENST00000377342 CD109Q6YHK3 1445 aa32.92■■■□□ 2.86
CBWD3-202ENST00000377342 TSPOAP1O95153 1857 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms