RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 KIF27Q86VH2 1401 aa30.63■■■□□ 2.49
HLA-A-201ENST00000376802 CUL7Q14999 1698 aa30.61■■■□□ 2.49
HLA-A-201ENST00000376802 KIF13AQ9H1H9 1805 aa30.57■■■□□ 2.49
HLA-A-201ENST00000376802 KIAA0586Q9BVV6 1533 aa30.57■■■□□ 2.48
HLA-A-201ENST00000376802 ADCY10Q96PN6 1610 aa30.46■■■□□ 2.47
HLA-A-201ENST00000376802 CARMIL1Q5VZK9 1371 aa30.44■■■□□ 2.46
HLA-A-201ENST00000376802 MAPKBP1O60336 1514 aa30.41■■■□□ 2.46
HLA-A-201ENST00000376802 NPM1P06748 294 aaKnown RBP eCLIP30.38■■■□□ 2.45
HLA-A-201ENST00000376802 ABCC10Q5T3U5 1492 aa30.38■■■□□ 2.45
HLA-A-201ENST00000376802 FAM69CQ0P6D2 419 aa30.34■■■□□ 2.45
HLA-A-201ENST00000376802 DIP2BQ9P265 1576 aa30.31■■■□□ 2.44
HLA-A-201ENST00000376802 AEBP2Q6ZN18 517 aaPredicted RBP30.29■■■□□ 2.44
HLA-A-201ENST00000376802 PTPRGP23470 1445 aa30.28■■■□□ 2.44
HLA-A-201ENST00000376802 IQGAP2Q13576 1575 aa30.27■■■□□ 2.44
HLA-A-201ENST00000376802 CARMIL2Q6F5E8 1435 aa30.22■■■□□ 2.43
HLA-A-201ENST00000376802 TNIKQ9UKE5 1360 aa30.21■■■□□ 2.43
HLA-A-201ENST00000376802 TTBK1Q5TCY1 1321 aaPredicted RBP30.18■■■□□ 2.42
HLA-A-201ENST00000376802 DISP1Q96F81 1524 aa30.16■■■□□ 2.42
HLA-A-201ENST00000376802 RAPGEF2Q9Y4G8 1499 aa30.16■■■□□ 2.42
HLA-A-201ENST00000376802 ABCC2Q92887 1545 aa30.14■■■□□ 2.42
HLA-A-201ENST00000376802 TSPOAP1O95153 1857 aa30.13■■■□□ 2.41
HLA-A-201ENST00000376802 UGGT2Q9NYU1 1516 aa30.09■■■□□ 2.41
HLA-A-201ENST00000376802 UHRF1BP1LA0JNW5 1464 aa30.09■■■□□ 2.41
HLA-A-201ENST00000376802 UACAQ9BZF9 1416 aa30.05■■■□□ 2.4
HLA-A-201ENST00000376802 KDM6BO15054 1643 aa30.04■■■□□ 2.4
HLA-A-201ENST00000376802 ASXL2Q76L83 1435 aa30.03■■■□□ 2.4
HLA-A-201ENST00000376802 PLB1Q6P1J6 1458 aa30■■■□□ 2.39
HLA-A-201ENST00000376802 KIAA0556O60303 1618 aa30■■■□□ 2.39
HLA-A-201ENST00000376802 GLI2P10070 1586 aa29.98■■■□□ 2.39
HLA-A-201ENST00000376802 KDM5BQ9UGL1 1544 aa29.96■■■□□ 2.39
HLA-A-201ENST00000376802 CTTNBP2Q8WZ74 1663 aa29.96■■■□□ 2.39
HLA-A-201ENST00000376802 PPRC1Q5VV67 1664 aaKnown RBP29.95■■■□□ 2.39
HLA-A-201ENST00000376802 ZCCHC11Q5TAX3 1644 aaKnown RBP29.9■■■□□ 2.38
HLA-A-201ENST00000376802 PRXQ9BXM0 1461 aa29.87■■■□□ 2.37
HLA-A-201ENST00000376802 EPRSP07814 1512 aaKnown RBP29.86■■■□□ 2.37
HLA-A-201ENST00000376802 MAP3K4Q9Y6R4 1608 aa29.83■■■□□ 2.37
HLA-A-201ENST00000376802 GOLGA3Q08378 1498 aa29.79■■■□□ 2.36
HLA-A-201ENST00000376802 KDM4FA0A1W2PPD8 638 aa29.79■■■□□ 2.36
HLA-A-201ENST00000376802 ABCA8O94911 1581 aa29.75■■■□□ 2.35
HLA-A-201ENST00000376802 COL17A1Q9UMD9 1497 aaPredicted RBP29.74■■■□□ 2.35
HLA-A-201ENST00000376802 WDR7Q9Y4E6 1490 aa29.72■■■□□ 2.35
HLA-A-201ENST00000376802 TEX14Q8IWB6 1497 aa29.67■■■□□ 2.34
HLA-A-201ENST00000376802 CSRNP3Q8WYN3 585 aa29.61■■■□□ 2.33
HLA-A-201ENST00000376802 CFAP43Q8NDM7 1665 aa29.58■■■□□ 2.33
HLA-A-201ENST00000376802 P3H3Q8IVL6 736 aa29.56■■■□□ 2.32
HLA-A-201ENST00000376802 KCNH8Q96L42 1107 aa29.56■■■□□ 2.32
HLA-A-201ENST00000376802 CD109Q6YHK3 1445 aa29.55■■■□□ 2.32
HLA-A-201ENST00000376802 MAGI3Q5TCQ9 1506 aa29.54■■■□□ 2.32
HLA-A-201ENST00000376802 SAMD9Q5K651 1589 aa29.53■■■□□ 2.32
HLA-A-201ENST00000376802 ADGRL1O94910 1474 aa29.52■■■□□ 2.32
HLA-A-201ENST00000376802 ATP10BO94823 1461 aa29.5■■■□□ 2.31
HLA-A-201ENST00000376802 ARID3CA6NKF2 412 aa29.46■■■□□ 2.31
HLA-A-201ENST00000376802 EEA1Q15075 1411 aa29.45■■■□□ 2.3
HLA-A-201ENST00000376802 FAM9AQ8IZU1 332 aaPredicted RBP29.43■■■□□ 2.3
HLA-A-201ENST00000376802 RAPGEF6Q8TEU7 1601 aa29.41■■■□□ 2.3
HLA-A-201ENST00000376802 ABCA9Q8IUA7 1624 aa29.36■■■□□ 2.29
HLA-A-201ENST00000376802 ARAP3Q8WWN8 1544 aa29.33■■■□□ 2.29
HLA-A-201ENST00000376802 NUP153P49790 1475 aaKnown RBP29.31■■■□□ 2.28
HLA-A-201ENST00000376802 RANGAP1P46060 587 aaPredicted RBP29.3■■■□□ 2.28
HLA-A-201ENST00000376802 FHOD3Q2V2M9 1422 aa29.29■■■□□ 2.28
HLA-A-201ENST00000376802 KIF21BO75037 1637 aa29.27■■■□□ 2.28
HLA-A-201ENST00000376802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.22■■■□□ 2.27
HLA-A-201ENST00000376802 HNRNPUL2Q1KMD3 747 aaKnown RBP29.22■■■□□ 2.27
HLA-A-201ENST00000376802 PHLDB1Q86UU1 1377 aa29.21■■■□□ 2.27
HLA-A-201ENST00000376802 EFCAB5A4FU69 1503 aa29.17■■■□□ 2.26
HLA-A-201ENST00000376802 NEO1Q92859 1461 aa29.17■■■□□ 2.26
HLA-A-201ENST00000376802 RAPGEF3O95398 923 aa29.15■■■□□ 2.26
HLA-A-201ENST00000376802 HECW2Q9P2P5 1572 aa29.13■■■□□ 2.25
HLA-A-201ENST00000376802 PLEKHD1A6NEE1 506 aa29.11■■■□□ 2.25
HLA-A-201ENST00000376802 FRMPD1Q5SYB0 1578 aa29.1■■■□□ 2.25
HLA-A-201ENST00000376802 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.05■■■□□ 2.24
HLA-A-201ENST00000376802 CHIC1Q5VXU3 224 aa29.05■■■□□ 2.24
HLA-A-201ENST00000376802 ADAMTSL3P82987 1691 aa29.03■■■□□ 2.24
HLA-A-201ENST00000376802 EHMT2Q96KQ7 1210 aa29.01■■■□□ 2.23
HLA-A-201ENST00000376802 CDK13Q14004 1512 aaKnown RBP29.01■■■□□ 2.23
HLA-A-201ENST00000376802 TTC37Q6PGP7 1564 aa29.01■■■□□ 2.23
HLA-A-201ENST00000376802 RICTORQ6R327 1708 aa29■■■□□ 2.23
HLA-A-201ENST00000376802 UBTFP17480 764 aaKnown RBP28.99■■■□□ 2.23
HLA-A-201ENST00000376802 AKNAQ7Z591 1439 aa28.98■■■□□ 2.23
HLA-A-201ENST00000376802 FANCAO15360 1455 aa28.98■■■□□ 2.23
HLA-A-201ENST00000376802 DENND4BO75064 1496 aaPredicted RBP28.95■■■□□ 2.23
HLA-A-201ENST00000376802 CFAP74Q9C0B2 1584 aa28.95■■■□□ 2.23
HLA-A-201ENST00000376802 ARHGAP35Q9NRY4 1499 aa28.95■■■□□ 2.23
HLA-A-201ENST00000376802 BCORL1Q5H9F3 1711 aa28.94■■■□□ 2.22
HLA-A-201ENST00000376802 PTPRMP28827 1452 aa28.92■■■□□ 2.22
HLA-A-201ENST00000376802 FMN1Q68DA7 1419 aa28.91■■■□□ 2.22
HLA-A-201ENST00000376802 ARHGEF40Q8TER5 1519 aa28.91■■■□□ 2.22
HLA-A-201ENST00000376802 ILDR1Q86SU0 546 aaPredicted RBP28.9■■■□□ 2.22
HLA-A-201ENST00000376802 HECW1Q76N89 1606 aa28.89■■■□□ 2.21
HLA-A-201ENST00000376802 MADDQ8WXG6 1647 aa28.86■■■□□ 2.21
HLA-A-201ENST00000376802 ARID4BQ4LE39 1312 aaPredicted RBP28.86■■■□□ 2.21
HLA-A-201ENST00000376802 ZMYM4Q5VZL5 1548 aa28.86■■■□□ 2.21
HLA-A-201ENST00000376802 PLCH2O75038 1416 aa28.85■■■□□ 2.21
HLA-A-201ENST00000376802 ATP1B4Q9UN42 357 aaPredicted RBP28.84■■■□□ 2.21
HLA-A-201ENST00000376802 LRRIQ1Q96JM4 1722 aa28.82■■■□□ 2.2
HLA-A-201ENST00000376802 SIGLEC1Q9BZZ2 1709 aa28.82■■■□□ 2.2
HLA-A-201ENST00000376802 MYO5CQ9NQX4 1742 aa28.79■■■□□ 2.2
HLA-A-201ENST00000376802 YEATS2Q9ULM3 1422 aa28.79■■■□□ 2.2
HLA-A-201ENST00000376802 KIF14Q15058 1648 aa28.78■■■□□ 2.2
HLA-A-201ENST00000376802 ZFYVE16Q7Z3T8 1539 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms