RNA–Protein interactions for RNA: ENST00000375469.5

SUSD3-201, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SUSD3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-201ENST00000375469 BIVM-ERCC5R4GMW8 1640 aa21.7■■□□□ 1.06
SUSD3-201ENST00000375469 TRHP20396 242 aaPredicted RBP21.65■■□□□ 1.06
SUSD3-201ENST00000375469 PPP4R3CPQ6ZMV5 832 aa21.63■■□□□ 1.05
SUSD3-201ENST00000375469 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
SUSD3-201ENST00000375469 FHAD1B1AJZ9 1412 aa21.62■■□□□ 1.05
SUSD3-201ENST00000375469 ERICH3Q5RHP9 1530 aa21.57■■□□□ 1.04
SUSD3-201ENST00000375469 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
SUSD3-201ENST00000375469 NUP160Q12769 1436 aa21.55■■□□□ 1.04
SUSD3-201ENST00000375469 CEP170Q5SW79 1584 aa21.49■■□□□ 1.03
SUSD3-201ENST00000375469 JPH4Q96JJ6 628 aa21.43■■□□□ 1.02
SUSD3-201ENST00000375469 ERCC6L2Q5T890 1561 aa21.42■■□□□ 1.02
SUSD3-201ENST00000375469 KIF27Q86VH2 1401 aa21.41■■□□□ 1.02
SUSD3-201ENST00000375469 IGF1RP08069 1367 aa21.41■■□□□ 1.02
SUSD3-201ENST00000375469 PRG4Q92954 1404 aaPredicted RBP21.38■■□□□ 1.01
SUSD3-201ENST00000375469 SHROOM2Q13796 1616 aa21.37■■□□□ 1.01
SUSD3-201ENST00000375469 CARMIL1Q5VZK9 1371 aa21.27■■□□□ 1
SUSD3-201ENST00000375469 KIAA0586Q9BVV6 1533 aa21.26■□□□□ 0.99
SUSD3-201ENST00000375469 RUSC2Q8N2Y8 1516 aa21.24■□□□□ 0.99
SUSD3-201ENST00000375469 CNKSR2Q8WXI2 1034 aa21.24■□□□□ 0.99
SUSD3-201ENST00000375469 CUL7Q14999 1698 aa21.24■□□□□ 0.99
SUSD3-201ENST00000375469 DCAF8L1A6NGE4 600 aa21.22■□□□□ 0.99
SUSD3-201ENST00000375469 NPM1P06748 294 aaKnown RBP eCLIP21.2■□□□□ 0.98
SUSD3-201ENST00000375469 HOXD11P31277 338 aaPredicted RBP21.15■□□□□ 0.98
SUSD3-201ENST00000375469 PTPRGP23470 1445 aa21.09■□□□□ 0.97
SUSD3-201ENST00000375469 CARMIL2Q6F5E8 1435 aa21.08■□□□□ 0.97
SUSD3-201ENST00000375469 TTBK1Q5TCY1 1321 aaPredicted RBP21.07■□□□□ 0.96
SUSD3-201ENST00000375469 FAM69CQ0P6D2 419 aa21.07■□□□□ 0.96
SUSD3-201ENST00000375469 RAPGEF2Q9Y4G8 1499 aa21.05■□□□□ 0.96
SUSD3-201ENST00000375469 TNIKQ9UKE5 1360 aa21.04■□□□□ 0.96
SUSD3-201ENST00000375469 RNF216Q9NWF9 866 aaPredicted RBP21.03■□□□□ 0.96
SUSD3-201ENST00000375469 ABCC10Q5T3U5 1492 aa21.01■□□□□ 0.95
SUSD3-201ENST00000375469 ADCY10Q96PN6 1610 aa21.01■□□□□ 0.95
SUSD3-201ENST00000375469 IQGAP2Q13576 1575 aa21.01■□□□□ 0.95
SUSD3-201ENST00000375469 MAPKBP1O60336 1514 aa20.99■□□□□ 0.95
SUSD3-201ENST00000375469 KIF13AQ9H1H9 1805 aa20.94■□□□□ 0.94
SUSD3-201ENST00000375469 DISP1Q96F81 1524 aa20.93■□□□□ 0.94
SUSD3-201ENST00000375469 ABCC2Q92887 1545 aa20.9■□□□□ 0.94
SUSD3-201ENST00000375469 UGGT2Q9NYU1 1516 aa20.9■□□□□ 0.94
SUSD3-201ENST00000375469 UACAQ9BZF9 1416 aa20.9■□□□□ 0.94
SUSD3-201ENST00000375469 DIP2BQ9P265 1576 aa20.89■□□□□ 0.93
SUSD3-201ENST00000375469 UHRF1BP1LA0JNW5 1464 aa20.88■□□□□ 0.93
SUSD3-201ENST00000375469 NCBP3Q53F19 620 aaKnown RBP20.88■□□□□ 0.93
SUSD3-201ENST00000375469 CACNB1Q02641 598 aaPredicted RBP20.85■□□□□ 0.93
SUSD3-201ENST00000375469 PRXQ9BXM0 1461 aa20.85■□□□□ 0.93
SUSD3-201ENST00000375469 PLB1Q6P1J6 1458 aa20.83■□□□□ 0.93
SUSD3-201ENST00000375469 ASXL2Q76L83 1435 aa20.83■□□□□ 0.93
SUSD3-201ENST00000375469 CSRNP3Q8WYN3 585 aa20.81■□□□□ 0.92
SUSD3-201ENST00000375469 KIAA0556O60303 1618 aa20.8■□□□□ 0.92
SUSD3-201ENST00000375469 GOLGA3Q08378 1498 aa20.79■□□□□ 0.92
SUSD3-201ENST00000375469 KDM5BQ9UGL1 1544 aa20.78■□□□□ 0.92
SUSD3-201ENST00000375469 FAM9AQ8IZU1 332 aaPredicted RBP20.75■□□□□ 0.91
SUSD3-201ENST00000375469 CTTNBP2Q8WZ74 1663 aa20.73■□□□□ 0.91
SUSD3-201ENST00000375469 GLI2P10070 1586 aa20.72■□□□□ 0.91
SUSD3-201ENST00000375469 EPRSP07814 1512 aaKnown RBP20.69■□□□□ 0.9
SUSD3-201ENST00000375469 TSPOAP1O95153 1857 aa20.69■□□□□ 0.9
SUSD3-201ENST00000375469 KDM6BO15054 1643 aa20.69■□□□□ 0.9
SUSD3-201ENST00000375469 P3H3Q8IVL6 736 aa20.68■□□□□ 0.9
SUSD3-201ENST00000375469 EEA1Q15075 1411 aa20.68■□□□□ 0.9
SUSD3-201ENST00000375469 ZCCHC11Q5TAX3 1644 aaKnown RBP20.66■□□□□ 0.9
SUSD3-201ENST00000375469 KCNH8Q96L42 1107 aa20.63■□□□□ 0.89
SUSD3-201ENST00000375469 ABCA8O94911 1581 aa20.63■□□□□ 0.89
SUSD3-201ENST00000375469 WDR7Q9Y4E6 1490 aa20.62■□□□□ 0.89
SUSD3-201ENST00000375469 RNF39Q9H2S5 420 aa20.62■□□□□ 0.89
SUSD3-201ENST00000375469 TEX14Q8IWB6 1497 aa20.58■□□□□ 0.89
SUSD3-201ENST00000375469 ARID3CA6NKF2 412 aa20.57■□□□□ 0.88
SUSD3-201ENST00000375469 RANGAP1P46060 587 aaPredicted RBP20.57■□□□□ 0.88
SUSD3-201ENST00000375469 PPRC1Q5VV67 1664 aaKnown RBP20.57■□□□□ 0.88
SUSD3-201ENST00000375469 MAP3K4Q9Y6R4 1608 aa20.56■□□□□ 0.88
SUSD3-201ENST00000375469 KDM4FA0A1W2PPD8 638 aa20.54■□□□□ 0.88
SUSD3-201ENST00000375469 COL17A1Q9UMD9 1497 aaPredicted RBP20.54■□□□□ 0.88
SUSD3-201ENST00000375469 CD109Q6YHK3 1445 aa20.53■□□□□ 0.88
SUSD3-201ENST00000375469 ATP10BO94823 1461 aa20.52■□□□□ 0.88
SUSD3-201ENST00000375469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.5■□□□□ 0.87
SUSD3-201ENST00000375469 HNRNPUL2Q1KMD3 747 aaKnown RBP20.5■□□□□ 0.87
SUSD3-201ENST00000375469 SAMD9Q5K651 1589 aa20.5■□□□□ 0.87
SUSD3-201ENST00000375469 MAGI3Q5TCQ9 1506 aa20.48■□□□□ 0.87
SUSD3-201ENST00000375469 NPM3O75607 178 aaKnown RBP20.47■□□□□ 0.87
SUSD3-201ENST00000375469 FHOD3Q2V2M9 1422 aa20.44■□□□□ 0.86
SUSD3-201ENST00000375469 UBTFP17480 764 aaKnown RBP20.43■□□□□ 0.86
SUSD3-201ENST00000375469 CFAP43Q8NDM7 1665 aa20.42■□□□□ 0.86
SUSD3-201ENST00000375469 EHMT2Q96KQ7 1210 aa20.42■□□□□ 0.86
SUSD3-201ENST00000375469 KIF21BO75037 1637 aa20.42■□□□□ 0.86
SUSD3-201ENST00000375469 RAPGEF6Q8TEU7 1601 aa20.41■□□□□ 0.86
SUSD3-201ENST00000375469 NUP153P49790 1475 aaKnown RBP20.38■□□□□ 0.85
SUSD3-201ENST00000375469 PLEKHD1A6NEE1 506 aa20.38■□□□□ 0.85
SUSD3-201ENST00000375469 C1QBPQ07021 282 aaKnown RBP20.38■□□□□ 0.85
SUSD3-201ENST00000375469 PHLDB1Q86UU1 1377 aa20.35■□□□□ 0.85
SUSD3-201ENST00000375469 EFCAB5A4FU69 1503 aa20.35■□□□□ 0.85
SUSD3-201ENST00000375469 ADGRL1O94910 1474 aa20.34■□□□□ 0.85
SUSD3-201ENST00000375469 ARAP3Q8WWN8 1544 aa20.32■□□□□ 0.84
SUSD3-201ENST00000375469 ABCA9Q8IUA7 1624 aa20.31■□□□□ 0.84
SUSD3-201ENST00000375469 RAPGEF3O95398 923 aa20.27■□□□□ 0.84
SUSD3-201ENST00000375469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.27■□□□□ 0.84
SUSD3-201ENST00000375469 ATP1B4Q9UN42 357 aaPredicted RBP20.27■□□□□ 0.84
SUSD3-201ENST00000375469 NEO1Q92859 1461 aa20.26■□□□□ 0.83
SUSD3-201ENST00000375469 FMN1Q68DA7 1419 aa20.24■□□□□ 0.83
SUSD3-201ENST00000375469 ARHGAP35Q9NRY4 1499 aa20.22■□□□□ 0.83
SUSD3-201ENST00000375469 CDK11AQ9UQ88 783 aaPredicted RBP20.2■□□□□ 0.82
SUSD3-201ENST00000375469 AKNAQ7Z591 1439 aa20.17■□□□□ 0.82
SUSD3-201ENST00000375469 CDK13Q14004 1512 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms