RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 CHIC2Q9UKJ5 165 aa18.28■□□□□ 0.52
CUL4A-203ENST00000375441 FHAD1B1AJZ9 1412 aa18.22■□□□□ 0.51
CUL4A-203ENST00000375441 IRX6P78412 446 aaPredicted RBP18.21■□□□□ 0.51
CUL4A-203ENST00000375441 ARAP1Q96P48 1450 aa18.21■□□□□ 0.51
CUL4A-203ENST00000375441 TSHZ2Q9NRE2 1034 aa18.21■□□□□ 0.51
CUL4A-203ENST00000375441 ZNF326Q5BKZ1 582 aaKnown RBP18.2■□□□□ 0.5
CUL4A-203ENST00000375441 RRP7BPQ9NSQ0 103 aa18.2■□□□□ 0.5
CUL4A-203ENST00000375441 TIMELESSQ9UNS1 1208 aa18.18■□□□□ 0.5
CUL4A-203ENST00000375441 ANP32EQ9BTT0 268 aa18.18■□□□□ 0.5
CUL4A-203ENST00000375441 FAM9BQ8IZU0 186 aa18.17■□□□□ 0.5
CUL4A-203ENST00000375441 PRXQ9BXM0 1461 aa18.17■□□□□ 0.5
CUL4A-203ENST00000375441 PPP1R15AO75807 674 aaPredicted RBP18.14■□□□□ 0.49
CUL4A-203ENST00000375441 RRBP1Q9P2E9 1410 aaKnown RBP18.13■□□□□ 0.49
CUL4A-203ENST00000375441 BICRAQ9NZM4 1560 aa18.13■□□□□ 0.49
CUL4A-203ENST00000375441 ERICH3Q5RHP9 1530 aa18.13■□□□□ 0.49
CUL4A-203ENST00000375441 TOP2BQ02880 1626 aa18.12■□□□□ 0.49
CUL4A-203ENST00000375441 CCER2I3L3R5 266 aa18.11■□□□□ 0.49
CUL4A-203ENST00000375441 EIF4G2P78344 907 aaKnown RBP eCLIP18.1■□□□□ 0.493e-7■■■■□ 20.7
CUL4A-203ENST00000375441 IGF1RP08069 1367 aa18.1■□□□□ 0.49
CUL4A-203ENST00000375441 ARHGAP35Q9NRY4 1499 aa18.1■□□□□ 0.49
CUL4A-203ENST00000375441 UNC13AQ9UPW8 1703 aa18.08■□□□□ 0.48
CUL4A-203ENST00000375441 MRS2Q9HD23 443 aa18.07■□□□□ 0.48
CUL4A-203ENST00000375441 FHOD3Q2V2M9 1422 aa18.06■□□□□ 0.48
CUL4A-203ENST00000375441 PHLDB1Q86UU1 1377 aa18.04■□□□□ 0.48
CUL4A-203ENST00000375441 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
CUL4A-203ENST00000375441 PEG3Q9GZU2 1588 aa18.04■□□□□ 0.48
CUL4A-203ENST00000375441 ZNF777Q9ULD5 760 aaPredicted RBP18.02■□□□□ 0.48
CUL4A-203ENST00000375441 RBM19Q9Y4C8 960 aaKnown RBP18.02■□□□□ 0.48
CUL4A-203ENST00000375441 CUX1P39880 1505 aa18.01■□□□□ 0.47
CUL4A-203ENST00000375441 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
CUL4A-203ENST00000375441 LRRC9Q6ZRR7 1453 aa17.97■□□□□ 0.47
CUL4A-203ENST00000375441 HSPA5P11021 654 aaKnown RBP17.96■□□□□ 0.47
CUL4A-203ENST00000375441 SLC4A1APQ9BWU0 796 aaKnown RBP17.95■□□□□ 0.46
CUL4A-203ENST00000375441 CFTRP13569 1480 aa17.94■□□□□ 0.46
CUL4A-203ENST00000375441 FGD5Q6ZNL6 1462 aa17.94■□□□□ 0.46
CUL4A-203ENST00000375441 FMN1Q68DA7 1419 aa17.93■□□□□ 0.46
CUL4A-203ENST00000375441 TDRD9Q8NDG6 1382 aaKnown RBP17.9■□□□□ 0.46
CUL4A-203ENST00000375441 FOXD1Q16676 465 aa17.9■□□□□ 0.46
CUL4A-203ENST00000375441 SENP3-EIF4A1A0A087X0R7 540 aa17.89■□□□□ 0.46
CUL4A-203ENST00000375441 RTL5Q5HYW3 569 aaPredicted RBP17.89■□□□□ 0.46
CUL4A-203ENST00000375441 PPP4R2Q9NY27 417 aa17.86■□□□□ 0.45
CUL4A-203ENST00000375441 CCDC136Q96JN2 1154 aa17.86■□□□□ 0.45
CUL4A-203ENST00000375441 TMC1Q8TDI8 760 aa17.85■□□□□ 0.45
CUL4A-203ENST00000375441 TIAM1Q13009 1591 aa17.85■□□□□ 0.45
CUL4A-203ENST00000375441 WDR97A6NE52 1622 aa17.85■□□□□ 0.45
CUL4A-203ENST00000375441 B4GALNT3Q6L9W6 998 aa17.84■□□□□ 0.45
CUL4A-203ENST00000375441 CCDC18Q5T9S5 1454 aa17.84■□□□□ 0.45
CUL4A-203ENST00000375441 DNAJC5BQ9UF47 199 aa17.84■□□□□ 0.45
CUL4A-203ENST00000375441 MYT1LQ9UL68 1186 aa17.84■□□□□ 0.45
CUL4A-203ENST00000375441 FANCD2Q9BXW9 1451 aa17.83■□□□□ 0.44
CUL4A-203ENST00000375441 BIVM-ERCC5R4GMW8 1640 aa17.83■□□□□ 0.44
CUL4A-203ENST00000375441 ANP32AP39687 249 aaKnown RBP17.83■□□□□ 0.44
CUL4A-203ENST00000375441 MPHOSPH9Q99550 1183 aa17.83■□□□□ 0.44
CUL4A-203ENST00000375441 SALL2Q9Y467 1007 aaPredicted RBP17.83■□□□□ 0.44
CUL4A-203ENST00000375441 RAD54L2Q9Y4B4 1467 aa17.83■□□□□ 0.44
CUL4A-203ENST00000375441 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
CUL4A-203ENST00000375441 L3MBTL2Q969R5 705 aa17.81■□□□□ 0.44
CUL4A-203ENST00000375441 FGD6Q6ZV73 1430 aa17.81■□□□□ 0.44
CUL4A-203ENST00000375441 KDM2AQ9Y2K7 1162 aa17.81■□□□□ 0.44
CUL4A-203ENST00000375441 DAXXQ9UER7 740 aaPredicted RBP17.78■□□□□ 0.44
CUL4A-203ENST00000375441 CHMP7Q8WUX9 453 aaPredicted RBP17.78■□□□□ 0.44
CUL4A-203ENST00000375441 NBR1Q14596 966 aa17.77■□□□□ 0.43
CUL4A-203ENST00000375441 NPM2Q86SE8 214 aaKnown RBP17.77■□□□□ 0.43
CUL4A-203ENST00000375441 CASKIN1Q8WXD9 1431 aa17.75■□□□□ 0.43
CUL4A-203ENST00000375441 UACAQ9BZF9 1416 aa17.75■□□□□ 0.43
CUL4A-203ENST00000375441 CFDP1Q9UEE9 299 aaPredicted RBP17.75■□□□□ 0.43
CUL4A-203ENST00000375441 MAPKBP1O60336 1514 aa17.73■□□□□ 0.43
CUL4A-203ENST00000375441 FYCO1Q9BQS8 1478 aa17.71■□□□□ 0.42
CUL4A-203ENST00000375441 TSPY4P0CV99 314 aa17.69■□□□□ 0.42
CUL4A-203ENST00000375441 TSPY10P0CW01 314 aa17.69■□□□□ 0.42
CUL4A-203ENST00000375441 BCL11AQ9H165 835 aa17.69■□□□□ 0.42
CUL4A-203ENST00000375441 MAP3K1Q13233 1512 aa17.69■□□□□ 0.42
CUL4A-203ENST00000375441 ERICH6BQ5W0A0 696 aa17.69■□□□□ 0.42
CUL4A-203ENST00000375441 MYOM3Q5VTT5 1437 aa17.69■□□□□ 0.42
CUL4A-203ENST00000375441 WASHC2AQ641Q2 1341 aa17.68■□□□□ 0.42
CUL4A-203ENST00000375441 PRKRIP1Q9H875 184 aaPredicted RBP17.68■□□□□ 0.42
CUL4A-203ENST00000375441 ERCC6Q03468 1493 aa17.68■□□□□ 0.42
CUL4A-203ENST00000375441 ZBTB47Q9UFB7 747 aaPredicted RBP17.68■□□□□ 0.42
CUL4A-203ENST00000375441 CARD11Q9BXL7 1154 aa17.67■□□□□ 0.42
CUL4A-203ENST00000375441 NCOA2Q15596 1464 aa17.65■□□□□ 0.42
CUL4A-203ENST00000375441 PCF11O94913 1555 aaKnown RBP17.65■□□□□ 0.42
CUL4A-203ENST00000375441 HFM1A2PYH4 1435 aa17.63■□□□□ 0.41
CUL4A-203ENST00000375441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.412e-7■■□□□ 14.1
CUL4A-203ENST00000375441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.62■□□□□ 0.411e-9■■■■■ 38.9
CUL4A-203ENST00000375441 PKD2Q13563 968 aa17.61■□□□□ 0.41
CUL4A-203ENST00000375441 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
CUL4A-203ENST00000375441 PLEKHD1A6NEE1 506 aa17.6■□□□□ 0.41
CUL4A-203ENST00000375441 EFCAB5A4FU69 1503 aa17.6■□□□□ 0.41
CUL4A-203ENST00000375441 RGL3Q3MIN7 710 aa17.59■□□□□ 0.41
CUL4A-203ENST00000375441 POLA1P09884 1462 aaPredicted RBP17.59■□□□□ 0.41
CUL4A-203ENST00000375441 NOP58Q9Y2X3 529 aaKnown RBP17.59■□□□□ 0.41
CUL4A-203ENST00000375441 NESP48681 1621 aa17.59■□□□□ 0.41
CUL4A-203ENST00000375441 GAPVD1Q14C86 1478 aa17.58■□□□□ 0.41
CUL4A-203ENST00000375441 NAIPQ13075 1403 aa17.58■□□□□ 0.4
CUL4A-203ENST00000375441 CCDC184Q52MB2 194 aa17.57■□□□□ 0.4
CUL4A-203ENST00000375441 ZBED9Q6R2W3 1325 aa17.56■□□□□ 0.4
CUL4A-203ENST00000375441 CCDC7Q96M83 1385 aa17.56■□□□□ 0.4
CUL4A-203ENST00000375441 TOPBP1Q92547 1522 aa17.55■□□□□ 0.4
CUL4A-203ENST00000375441 DCAF11Q8TEB1 546 aa17.55■□□□□ 0.4
CUL4A-203ENST00000375441 FANCIQ9NVI1 1328 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms