RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 JPH4Q96JJ6 628 aa18.7■□□□□ 0.58
HSPG2-202ENST00000374676 SHROOM2Q13796 1616 aa18.7■□□□□ 0.58
HSPG2-202ENST00000374676 CTTNBP2Q8WZ74 1663 aa18.66■□□□□ 0.58
HSPG2-202ENST00000374676 ARHGEF11O15085 1522 aa18.66■□□□□ 0.58
HSPG2-202ENST00000374676 IQGAP2Q13576 1575 aa18.66■□□□□ 0.58
HSPG2-202ENST00000374676 GOLGA3Q08378 1498 aa18.65■□□□□ 0.58
HSPG2-202ENST00000374676 RIMBP3CA6NJZ7 1639 aa18.64■□□□□ 0.57
HSPG2-202ENST00000374676 RIMBP3BA6NNM3 1639 aa18.64■□□□□ 0.57
HSPG2-202ENST00000374676 RIMBP3Q9UFD9 1639 aa18.64■□□□□ 0.57
HSPG2-202ENST00000374676 PRG4Q92954 1404 aaPredicted RBP18.61■□□□□ 0.57
HSPG2-202ENST00000374676 UGGT2Q9NYU1 1516 aa18.59■□□□□ 0.57
HSPG2-202ENST00000374676 UBTFP17480 764 aaKnown RBP18.58■□□□□ 0.56
HSPG2-202ENST00000374676 ERCC6L2Q5T890 1561 aa18.57■□□□□ 0.56
HSPG2-202ENST00000374676 EHMT2Q96KQ7 1210 aa18.55■□□□□ 0.56
HSPG2-202ENST00000374676 CARMIL2Q6F5E8 1435 aa18.55■□□□□ 0.56
HSPG2-202ENST00000374676 DISP1Q96F81 1524 aa18.53■□□□□ 0.56
HSPG2-202ENST00000374676 ARAP1Q96P48 1450 aa18.52■□□□□ 0.56
HSPG2-202ENST00000374676 CYB5RLQ6IPT4 315 aa18.49■□□□□ 0.55
HSPG2-202ENST00000374676 TNIKQ9UKE5 1360 aa18.48■□□□□ 0.55
HSPG2-202ENST00000374676 KIAA0556O60303 1618 aa18.48■□□□□ 0.55
HSPG2-202ENST00000374676 SAMD9Q5K651 1589 aa18.45■□□□□ 0.54
HSPG2-202ENST00000374676 PTPRGP23470 1445 aa18.44■□□□□ 0.54
HSPG2-202ENST00000374676 LOC105371045A0A1W2PR82 267 aa18.43■□□□□ 0.54
HSPG2-202ENST00000374676 EFCAB5A4FU69 1503 aa18.41■□□□□ 0.54
HSPG2-202ENST00000374676 RANGAP1P46060 587 aaPredicted RBP18.41■□□□□ 0.54
HSPG2-202ENST00000374676 P3H3Q8IVL6 736 aa18.38■□□□□ 0.53
HSPG2-202ENST00000374676 ARHGAP35Q9NRY4 1499 aa18.35■□□□□ 0.53
HSPG2-202ENST00000374676 TTBK1Q5TCY1 1321 aaPredicted RBP18.34■□□□□ 0.53
HSPG2-202ENST00000374676 FHOD3Q2V2M9 1422 aa18.32■□□□□ 0.52
HSPG2-202ENST00000374676 UACAQ9BZF9 1416 aa18.32■□□□□ 0.52
HSPG2-202ENST00000374676 CLIP1P30622 1438 aa18.32■□□□□ 0.52
HSPG2-202ENST00000374676 UHRF1BP1LA0JNW5 1464 aa18.31■□□□□ 0.52
HSPG2-202ENST00000374676 ADCY10Q96PN6 1610 aa18.28■□□□□ 0.52
HSPG2-202ENST00000374676 CEP162Q5TB80 1403 aa18.28■□□□□ 0.52
HSPG2-202ENST00000374676 ABCA8O94911 1581 aa18.28■□□□□ 0.52
HSPG2-202ENST00000374676 ABCC2Q92887 1545 aa18.28■□□□□ 0.52
HSPG2-202ENST00000374676 PLB1Q6P1J6 1458 aa18.26■□□□□ 0.51
HSPG2-202ENST00000374676 NPM1P06748 294 aaKnown RBP eCLIP18.25■□□□□ 0.51
HSPG2-202ENST00000374676 FMN1Q68DA7 1419 aa18.24■□□□□ 0.51
HSPG2-202ENST00000374676 RAPGEF6Q8TEU7 1601 aa18.21■□□□□ 0.51
HSPG2-202ENST00000374676 KDM5BQ9UGL1 1544 aa18.21■□□□□ 0.51
HSPG2-202ENST00000374676 NUP153P49790 1475 aaKnown RBP18.15■□□□□ 0.5
HSPG2-202ENST00000374676 MAPKBP1O60336 1514 aa18.14■□□□□ 0.49
HSPG2-202ENST00000374676 ZCCHC11Q5TAX3 1644 aaKnown RBP18.14■□□□□ 0.49
HSPG2-202ENST00000374676 CASKIN1Q8WXD9 1431 aa18.14■□□□□ 0.49
HSPG2-202ENST00000374676 ATP10BO94823 1461 aa18.14■□□□□ 0.49
HSPG2-202ENST00000374676 HECW1Q76N89 1606 aa18.11■□□□□ 0.49
HSPG2-202ENST00000374676 FYCO1Q9BQS8 1478 aa18.08■□□□□ 0.49
HSPG2-202ENST00000374676 ASXL2Q76L83 1435 aa18.08■□□□□ 0.49
HSPG2-202ENST00000374676 ATP1B4Q9UN42 357 aaPredicted RBP18.08■□□□□ 0.48
HSPG2-202ENST00000374676 PCF11O94913 1555 aaKnown RBP18.08■□□□□ 0.48
HSPG2-202ENST00000374676 ARID3CA6NKF2 412 aa18.07■□□□□ 0.48
HSPG2-202ENST00000374676 EPRSP07814 1512 aaKnown RBP18.07■□□□□ 0.48
HSPG2-202ENST00000374676 VPS8Q8N3P4 1428 aa18.06■□□□□ 0.48
HSPG2-202ENST00000374676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
HSPG2-202ENST00000374676 HNRNPUL2Q1KMD3 747 aaKnown RBP18.05■□□□□ 0.48
HSPG2-202ENST00000374676 LRRIQ1Q96JM4 1722 aa18.03■□□□□ 0.48
HSPG2-202ENST00000374676 ABCC10Q5T3U5 1492 aa18.03■□□□□ 0.48
HSPG2-202ENST00000374676 WDR7Q9Y4E6 1490 aa18.03■□□□□ 0.48
HSPG2-202ENST00000374676 CDK13Q14004 1512 aaKnown RBP18.03■□□□□ 0.48
HSPG2-202ENST00000374676 CCDC18Q5T9S5 1454 aa18.02■□□□□ 0.48
HSPG2-202ENST00000374676 PLEKHD1A6NEE1 506 aa18.02■□□□□ 0.48
HSPG2-202ENST00000374676 TRHP20396 242 aaPredicted RBP18.02■□□□□ 0.48
HSPG2-202ENST00000374676 CDK11AQ9UQ88 783 aaPredicted RBP18.01■□□□□ 0.47
HSPG2-202ENST00000374676 KIF13AQ9H1H9 1805 aa18■□□□□ 0.47
HSPG2-202ENST00000374676 DIP2BQ9P265 1576 aa18■□□□□ 0.47
HSPG2-202ENST00000374676 FAM69CQ0P6D2 419 aa17.99■□□□□ 0.47
HSPG2-202ENST00000374676 GLI2P10070 1586 aa17.98■□□□□ 0.47
HSPG2-202ENST00000374676 KCNH8Q96L42 1107 aa17.97■□□□□ 0.47
HSPG2-202ENST00000374676 TROQ12816 1431 aaPredicted RBP17.92■□□□□ 0.46
HSPG2-202ENST00000374676 MAP3K1Q13233 1512 aa17.92■□□□□ 0.46
HSPG2-202ENST00000374676 TIAM1Q13009 1591 aa17.89■□□□□ 0.45
HSPG2-202ENST00000374676 CFAP43Q8NDM7 1665 aa17.89■□□□□ 0.45
HSPG2-202ENST00000374676 MAGI3Q5TCQ9 1506 aa17.88■□□□□ 0.45
HSPG2-202ENST00000374676 ABCA9Q8IUA7 1624 aa17.88■□□□□ 0.45
HSPG2-202ENST00000374676 MAP3K4Q9Y6R4 1608 aa17.88■□□□□ 0.45
HSPG2-202ENST00000374676 APLP2Q06481 763 aa17.87■□□□□ 0.45
HSPG2-202ENST00000374676 MTUS2Q5JR59 1369 aa17.85■□□□□ 0.45
HSPG2-202ENST00000374676 CD109Q6YHK3 1445 aa17.85■□□□□ 0.45
HSPG2-202ENST00000374676 TSPOAP1O95153 1857 aa17.84■□□□□ 0.45
HSPG2-202ENST00000374676 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.84■□□□□ 0.45
HSPG2-202ENST00000374676 KIF14Q15058 1648 aa17.83■□□□□ 0.45
HSPG2-202ENST00000374676 EHBP1L1Q8N3D4 1523 aa17.82■□□□□ 0.44
HSPG2-202ENST00000374676 LRRC9Q6ZRR7 1453 aa17.82■□□□□ 0.44
HSPG2-202ENST00000374676 PPRC1Q5VV67 1664 aaKnown RBP17.81■□□□□ 0.44
HSPG2-202ENST00000374676 TTC37Q6PGP7 1564 aa17.8■□□□□ 0.44
HSPG2-202ENST00000374676 KANK4Q5T7N3 995 aaPredicted RBP17.79■□□□□ 0.44
HSPG2-202ENST00000374676 TEX14Q8IWB6 1497 aa17.79■□□□□ 0.44
HSPG2-202ENST00000374676 PLCH2O75038 1416 aa17.77■□□□□ 0.44
HSPG2-202ENST00000374676 ARAP3Q8WWN8 1544 aa17.76■□□□□ 0.43
HSPG2-202ENST00000374676 SUPT6HQ7KZ85 1726 aaKnown RBP17.75■□□□□ 0.43
HSPG2-202ENST00000374676 MYO5CQ9NQX4 1742 aa17.75■□□□□ 0.43
HSPG2-202ENST00000374676 PHLDB1Q86UU1 1377 aa17.74■□□□□ 0.43
HSPG2-202ENST00000374676 NEO1Q92859 1461 aa17.73■□□□□ 0.43
HSPG2-202ENST00000374676 CDC42BPAQ5VT25 1732 aa17.72■□□□□ 0.43
HSPG2-202ENST00000374676 NCOA2Q15596 1464 aa17.72■□□□□ 0.43
HSPG2-202ENST00000374676 CCNB3Q8WWL7 1395 aa17.72■□□□□ 0.43
HSPG2-202ENST00000374676 EFCAB2Q5VUJ9 269 aa17.72■□□□□ 0.43
HSPG2-202ENST00000374676 CDC42BPBQ9Y5S2 1711 aa17.72■□□□□ 0.43
HSPG2-202ENST00000374676 GPATCH8Q9UKJ3 1502 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms