RNA–Protein interactions for RNA: ENST00000374263.7

SUSD1-202, Transcript of sushi domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SUSD1, Length 2,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-202ENST00000374263 ANP32EQ9BTT0 268 aa29.25■■■□□ 2.27
SUSD1-202ENST00000374263 FAM50AQ14320 339 aaKnown RBP29.19■■■□□ 2.26
SUSD1-202ENST00000374263 POLA1P09884 1462 aaPredicted RBP29.19■■■□□ 2.26
SUSD1-202ENST00000374263 TOPBP1Q92547 1522 aa29.17■■■□□ 2.26
SUSD1-202ENST00000374263 BCANQ96GW7 911 aa29.14■■■□□ 2.26
SUSD1-202ENST00000374263 DHX57Q6P158 1386 aaKnown RBP29.13■■■□□ 2.25
SUSD1-202ENST00000374263 FHOD3Q2V2M9 1422 aa29.12■■■□□ 2.25
SUSD1-202ENST00000374263 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
SUSD1-202ENST00000374263 KCNH8Q96L42 1107 aa29.1■■■□□ 2.25
SUSD1-202ENST00000374263 CCNB3Q8WWL7 1395 aa29.06■■■□□ 2.24
SUSD1-202ENST00000374263 ARID3CA6NKF2 412 aa29.06■■■□□ 2.24
SUSD1-202ENST00000374263 BCL11AQ9H165 835 aa29.06■■■□□ 2.24
SUSD1-202ENST00000374263 DNMBPQ6XZF7 1577 aa29.03■■■□□ 2.24
SUSD1-202ENST00000374263 URB2Q14146 1524 aaKnown RBP29.02■■■□□ 2.24
SUSD1-202ENST00000374263 ABCA10Q8WWZ4 1543 aa28.95■■■□□ 2.22
SUSD1-202ENST00000374263 PDS5BQ9NTI5 1447 aa28.92■■■□□ 2.22
SUSD1-202ENST00000374263 PHLDB1Q86UU1 1377 aa28.92■■■□□ 2.22
SUSD1-202ENST00000374263 FKBP8Q14318 412 aa28.9■■■□□ 2.22
SUSD1-202ENST00000374263 RRBP1Q9P2E9 1410 aaKnown RBP28.89■■■□□ 2.21
SUSD1-202ENST00000374263 GAPVD1Q14C86 1478 aa28.83■■■□□ 2.21
SUSD1-202ENST00000374263 FHAD1B1AJZ9 1412 aa28.82■■■□□ 2.2
SUSD1-202ENST00000374263 LRRC9Q6ZRR7 1453 aa28.82■■■□□ 2.2
SUSD1-202ENST00000374263 LAMC3Q9Y6N6 1575 aa28.81■■■□□ 2.2
SUSD1-202ENST00000374263 RAB3GAP2Q9H2M9 1393 aa28.81■■■□□ 2.2
SUSD1-202ENST00000374263 TIAM1Q13009 1591 aa28.8■■■□□ 2.2
SUSD1-202ENST00000374263 PCF11O94913 1555 aaKnown RBP28.79■■■□□ 2.2
SUSD1-202ENST00000374263 AQRO60306 1485 aaKnown RBP eCLIP28.78■■■□□ 2.21e-7■■■□□ 15.2
SUSD1-202ENST00000374263 SIN3AQ96ST3 1273 aa28.75■■■□□ 2.19
SUSD1-202ENST00000374263 MTUS2Q5JR59 1369 aa28.72■■■□□ 2.19
SUSD1-202ENST00000374263 DDX10Q13206 875 aaKnown RBP28.71■■■□□ 2.19
SUSD1-202ENST00000374263 KIF21AQ7Z4S6 1674 aa28.71■■■□□ 2.19
SUSD1-202ENST00000374263 RBM19Q9Y4C8 960 aaKnown RBP28.71■■■□□ 2.19
SUSD1-202ENST00000374263 FBLN2P98095 1184 aa28.67■■■□□ 2.18
SUSD1-202ENST00000374263 NEFLP07196 543 aa28.62■■■□□ 2.17
SUSD1-202ENST00000374263 CHIC2Q9UKJ5 165 aa28.61■■■□□ 2.17
SUSD1-202ENST00000374263 HIRIP3Q9BW71 556 aaPredicted RBP28.6■■■□□ 2.17
SUSD1-202ENST00000374263 TRIM52Q96A61 297 aa28.6■■■□□ 2.17
SUSD1-202ENST00000374263 SETD5Q9C0A6 1442 aa28.59■■■□□ 2.17
SUSD1-202ENST00000374263 CASKIN1Q8WXD9 1431 aa28.58■■■□□ 2.17
SUSD1-202ENST00000374263 FMN1Q68DA7 1419 aa28.58■■■□□ 2.16
SUSD1-202ENST00000374263 CUL7Q14999 1698 aa28.57■■■□□ 2.16
SUSD1-202ENST00000374263 FYCO1Q9BQS8 1478 aa28.53■■■□□ 2.16
SUSD1-202ENST00000374263 ZNF608Q9ULD9 1512 aaPredicted RBP28.51■■■□□ 2.16
SUSD1-202ENST00000374263 ABCA5Q8WWZ7 1642 aa28.5■■■□□ 2.15
SUSD1-202ENST00000374263 RRP7BPQ9NSQ0 103 aa28.49■■■□□ 2.15
SUSD1-202ENST00000374263 EFCAB5A4FU69 1503 aa28.49■■■□□ 2.15
SUSD1-202ENST00000374263 MAP3K1Q13233 1512 aa28.47■■■□□ 2.15
SUSD1-202ENST00000374263 CTTNBP2Q8WZ74 1663 aa28.47■■■□□ 2.15
SUSD1-202ENST00000374263 WDR97A6NE52 1622 aa28.44■■■□□ 2.14
SUSD1-202ENST00000374263 MSH5O43196 834 aa28.44■■■□□ 2.14
SUSD1-202ENST00000374263 MAPKBP1O60336 1514 aa28.44■■■□□ 2.14
SUSD1-202ENST00000374263 ERCC6Q03468 1493 aa28.43■■■□□ 2.14
SUSD1-202ENST00000374263 SNAPC4Q5SXM2 1469 aa28.43■■■□□ 2.14
SUSD1-202ENST00000374263 MRC2Q9UBG0 1479 aa28.42■■■□□ 2.14
SUSD1-202ENST00000374263 FGD6Q6ZV73 1430 aa28.41■■■□□ 2.14
SUSD1-202ENST00000374263 TARBP1Q13395 1621 aaKnown RBP28.4■■■□□ 2.14
SUSD1-202ENST00000374263 PPP1R15AO75807 674 aaPredicted RBP28.39■■■□□ 2.14
SUSD1-202ENST00000374263 CFAP43Q8NDM7 1665 aa28.38■■■□□ 2.13
SUSD1-202ENST00000374263 CHMP7Q8WUX9 453 aaPredicted RBP28.36■■■□□ 2.13
SUSD1-202ENST00000374263 PTPRKQ15262 1439 aa28.35■■■□□ 2.13
SUSD1-202ENST00000374263 NCOA2Q15596 1464 aa28.34■■■□□ 2.13
SUSD1-202ENST00000374263 ANP32CO43423 234 aa28.32■■■□□ 2.12
SUSD1-202ENST00000374263 GRIN2BQ13224 1484 aa28.29■■■□□ 2.12
SUSD1-202ENST00000374263 IRX6P78412 446 aaPredicted RBP28.29■■■□□ 2.12
SUSD1-202ENST00000374263 CDK13Q14004 1512 aaKnown RBP28.28■■■□□ 2.12
SUSD1-202ENST00000374263 CCER2I3L3R5 266 aa28.25■■■□□ 2.11
SUSD1-202ENST00000374263 SAMD9Q5K651 1589 aa28.24■■■□□ 2.11
SUSD1-202ENST00000374263 FOXD1Q16676 465 aa28.24■■■□□ 2.11
SUSD1-202ENST00000374263 MYOM3Q5VTT5 1437 aa28.23■■■□□ 2.11
SUSD1-202ENST00000374263 MAGI3Q5TCQ9 1506 aa28.22■■■□□ 2.11
SUSD1-202ENST00000374263 ZNF777Q9ULD5 760 aaPredicted RBP28.22■■■□□ 2.11
SUSD1-202ENST00000374263 ZNF644Q9H582 1327 aaPredicted RBP28.21■■■□□ 2.11
SUSD1-202ENST00000374263 IQGAP2Q13576 1575 aa28.21■■■□□ 2.11
SUSD1-202ENST00000374263 ERICH6Q7L0X2 663 aa28.2■■■□□ 2.11
SUSD1-202ENST00000374263 PBRM1Q86U86 1689 aa28.2■■■□□ 2.1
SUSD1-202ENST00000374263 LRRIQ1Q96JM4 1722 aa28.19■■■□□ 2.1
SUSD1-202ENST00000374263 CCDC18Q5T9S5 1454 aa28.19■■■□□ 2.1
SUSD1-202ENST00000374263 TONSLQ96HA7 1378 aa28.17■■■□□ 2.1
SUSD1-202ENST00000374263 ADAMTS12P58397 1594 aa28.16■■■□□ 2.1
SUSD1-202ENST00000374263 IFT140Q96RY7 1462 aa28.16■■■□□ 2.1
SUSD1-202ENST00000374263 EPRSP07814 1512 aaKnown RBP28.13■■■□□ 2.09
SUSD1-202ENST00000374263 CDK11AQ9UQ88 783 aaPredicted RBP28.13■■■□□ 2.09
SUSD1-202ENST00000374263 HNRNPUQ00839 825 aaKnown RBP eCLIP28.11■■■□□ 2.09
SUSD1-202ENST00000374263 NAIPQ13075 1403 aa28.09■■■□□ 2.09
SUSD1-202ENST00000374263 FANCIQ9NVI1 1328 aa28.09■■■□□ 2.09
SUSD1-202ENST00000374263 EHBP1L1Q8N3D4 1523 aa28.06■■■□□ 2.08
SUSD1-202ENST00000374263 HFM1A2PYH4 1435 aa28.06■■■□□ 2.08
SUSD1-202ENST00000374263 THOC2Q8NI27 1593 aaKnown RBP28.06■■■□□ 2.08
SUSD1-202ENST00000374263 SUPT6HQ7KZ85 1726 aaKnown RBP28.05■■■□□ 2.08
SUSD1-202ENST00000374263 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.04■■■□□ 2.08
SUSD1-202ENST00000374263 JPH4Q96JJ6 628 aa28.04■■■□□ 2.08
SUSD1-202ENST00000374263 GRIN2AQ12879 1464 aa28.02■■■□□ 2.08
SUSD1-202ENST00000374263 WDR62O43379 1518 aa28.01■■■□□ 2.07
SUSD1-202ENST00000374263 PTPN23Q9H3S7 1636 aa28.01■■■□□ 2.07
SUSD1-202ENST00000374263 EIF4G3O43432 1585 aaKnown RBP28■■■□□ 2.07
SUSD1-202ENST00000374263 UGGT2Q9NYU1 1516 aa28■■■□□ 2.07
SUSD1-202ENST00000374263 TIMELESSQ9UNS1 1208 aa27.99■■■□□ 2.07
SUSD1-202ENST00000374263 KIAA0586Q9BVV6 1533 aa27.99■■■□□ 2.07
SUSD1-202ENST00000374263 HECW1Q76N89 1606 aa27.99■■■□□ 2.07
SUSD1-202ENST00000374263 UACAQ9BZF9 1416 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms