RNA–Protein interactions for RNA: ENST00000373608.7

COPS7B-203, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best) BASIC

Gene COPS7B, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-203ENST00000373608 CUL7Q14999 1698 aa20.39■□□□□ 0.85
COPS7B-203ENST00000373608 NCBP3Q53F19 620 aaKnown RBP20.36■□□□□ 0.85
COPS7B-203ENST00000373608 RAD54L2Q9Y4B4 1467 aa20.36■□□□□ 0.85
COPS7B-203ENST00000373608 TIAM1Q13009 1591 aa20.36■□□□□ 0.85
COPS7B-203ENST00000373608 ZNF316A6NFI3 1004 aaPredicted RBP20.36■□□□□ 0.85
COPS7B-203ENST00000373608 CLSPNQ9HAW4 1339 aa20.35■□□□□ 0.85
COPS7B-203ENST00000373608 FHAD1B1AJZ9 1412 aa20.33■□□□□ 0.85
COPS7B-203ENST00000373608 WDR97A6NE52 1622 aa20.33■□□□□ 0.85
COPS7B-203ENST00000373608 CCNB3Q8WWL7 1395 aa20.31■□□□□ 0.84
COPS7B-203ENST00000373608 CTTNBP2Q8WZ74 1663 aa20.31■□□□□ 0.84
COPS7B-203ENST00000373608 EFCAB5A4FU69 1503 aa20.29■□□□□ 0.84
COPS7B-203ENST00000373608 CFAP43Q8NDM7 1665 aa20.28■□□□□ 0.84
COPS7B-203ENST00000373608 URB2Q14146 1524 aaKnown RBP20.28■□□□□ 0.84
COPS7B-203ENST00000373608 PDS5BQ9NTI5 1447 aa20.26■□□□□ 0.83
COPS7B-203ENST00000373608 DHX57Q6P158 1386 aaKnown RBP20.26■□□□□ 0.83
COPS7B-203ENST00000373608 LRRC9Q6ZRR7 1453 aa20.25■□□□□ 0.83
COPS7B-203ENST00000373608 PCF11O94913 1555 aaKnown RBP20.24■□□□□ 0.83
COPS7B-203ENST00000373608 ABCA5Q8WWZ7 1642 aa20.23■□□□□ 0.83
COPS7B-203ENST00000373608 FYCO1Q9BQS8 1478 aa20.19■□□□□ 0.82
COPS7B-203ENST00000373608 AQRO60306 1485 aaKnown RBP eCLIP20.19■□□□□ 0.822e-6■■■■■ 29.8
COPS7B-203ENST00000373608 KIF21AQ7Z4S6 1674 aa20.18■□□□□ 0.82
COPS7B-203ENST00000373608 FHOD3Q2V2M9 1422 aa20.15■□□□□ 0.82
COPS7B-203ENST00000373608 CASKIN1Q8WXD9 1431 aa20.15■□□□□ 0.82
COPS7B-203ENST00000373608 GAPVD1Q14C86 1478 aa20.14■□□□□ 0.81
COPS7B-203ENST00000373608 CENPBP07199 599 aaPredicted RBP20.12■□□□□ 0.81
COPS7B-203ENST00000373608 FMN1Q68DA7 1419 aa20.12■□□□□ 0.81
COPS7B-203ENST00000373608 P3H3Q8IVL6 736 aa20.12■□□□□ 0.81
COPS7B-203ENST00000373608 ACIN1Q9UKV3 1341 aaKnown RBP20.11■□□□□ 0.81
COPS7B-203ENST00000373608 PHLDB1Q86UU1 1377 aa20.1■□□□□ 0.81
COPS7B-203ENST00000373608 TDRD9Q8NDG6 1382 aaKnown RBP20.09■□□□□ 0.81
COPS7B-203ENST00000373608 SAMD9Q5K651 1589 aa20.09■□□□□ 0.81
COPS7B-203ENST00000373608 TARBP1Q13395 1621 aaKnown RBP20.08■□□□□ 0.8
COPS7B-203ENST00000373608 ITGAEP38570 1179 aa20.07■□□□□ 0.8
COPS7B-203ENST00000373608 RAB3GAP2Q9H2M9 1393 aa20.05■□□□□ 0.8
COPS7B-203ENST00000373608 ATP1B4Q9UN42 357 aaPredicted RBP20.04■□□□□ 0.8
COPS7B-203ENST00000373608 SNAPC4Q5SXM2 1469 aa20.04■□□□□ 0.8
COPS7B-203ENST00000373608 SETD5Q9C0A6 1442 aa20.03■□□□□ 0.8
COPS7B-203ENST00000373608 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.03■□□□□ 0.83e-6■■■■□ 26.4
COPS7B-203ENST00000373608 NEUROD1Q13562 356 aa20.02■□□□□ 0.8
COPS7B-203ENST00000373608 PBRM1Q86U86 1689 aa20.02■□□□□ 0.79
COPS7B-203ENST00000373608 THOC2Q8NI27 1593 aaKnown RBP20.01■□□□□ 0.79
COPS7B-203ENST00000373608 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
COPS7B-203ENST00000373608 FAM50AQ14320 339 aaKnown RBP19.98■□□□□ 0.79
COPS7B-203ENST00000373608 MAPKBP1O60336 1514 aa19.96■□□□□ 0.79
COPS7B-203ENST00000373608 LRRIQ1Q96JM4 1722 aa19.95■□□□□ 0.78
COPS7B-203ENST00000373608 MRC2Q9UBG0 1479 aa19.95■□□□□ 0.78
COPS7B-203ENST00000373608 MIER1Q8N108 512 aa19.94■□□□□ 0.78
COPS7B-203ENST00000373608 GRIN2BQ13224 1484 aa19.94■□□□□ 0.78
COPS7B-203ENST00000373608 MTUS2Q5JR59 1369 aa19.92■□□□□ 0.78
COPS7B-203ENST00000373608 ARXQ96QS3 562 aa19.91■□□□□ 0.78
COPS7B-203ENST00000373608 FGD6Q6ZV73 1430 aa19.91■□□□□ 0.78
COPS7B-203ENST00000373608 ADAMTS12P58397 1594 aa19.91■□□□□ 0.78
COPS7B-203ENST00000373608 SUPT6HQ7KZ85 1726 aaKnown RBP19.89■□□□□ 0.78
COPS7B-203ENST00000373608 EHBP1L1Q8N3D4 1523 aa19.89■□□□□ 0.77
COPS7B-203ENST00000373608 IQGAP2Q13576 1575 aa19.88■□□□□ 0.77
COPS7B-203ENST00000373608 CCDC18Q5T9S5 1454 aa19.86■□□□□ 0.77
COPS7B-203ENST00000373608 HECW1Q76N89 1606 aa19.84■□□□□ 0.77
COPS7B-203ENST00000373608 NCOA2Q15596 1464 aa19.84■□□□□ 0.77
COPS7B-203ENST00000373608 IFT140Q96RY7 1462 aa19.83■□□□□ 0.76
COPS7B-203ENST00000373608 WDR62O43379 1518 aa19.82■□□□□ 0.76
COPS7B-203ENST00000373608 MYOM3Q5VTT5 1437 aa19.82■□□□□ 0.76
COPS7B-203ENST00000373608 PLPPR3Q6T4P5 718 aa19.82■□□□□ 0.76
COPS7B-203ENST00000373608 RTN4Q9NQC3 1192 aaKnown RBP19.82■□□□□ 0.76
COPS7B-203ENST00000373608 GTF3C3Q9Y5Q9 886 aa19.81■□□□□ 0.76
COPS7B-203ENST00000373608 PLEKHG5O94827 1062 aa19.81■□□□□ 0.76
COPS7B-203ENST00000373608 TIMELESSQ9UNS1 1208 aa19.8■□□□□ 0.76
COPS7B-203ENST00000373608 UGGT2Q9NYU1 1516 aa19.79■□□□□ 0.76
COPS7B-203ENST00000373608 YTHDC1Q96MU7 727 aaKnown RBP19.79■□□□□ 0.76
COPS7B-203ENST00000373608 ARHGEF11O15085 1522 aa19.78■□□□□ 0.76
COPS7B-203ENST00000373608 HFM1A2PYH4 1435 aa19.77■□□□□ 0.76
COPS7B-203ENST00000373608 PTPN23Q9H3S7 1636 aa19.76■□□□□ 0.75
COPS7B-203ENST00000373608 MAGI3Q5TCQ9 1506 aa19.73■□□□□ 0.75
COPS7B-203ENST00000373608 EPRSP07814 1512 aaKnown RBP19.73■□□□□ 0.75
COPS7B-203ENST00000373608 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
COPS7B-203ENST00000373608 PTPRKQ15262 1439 aa19.71■□□□□ 0.75
COPS7B-203ENST00000373608 UACAQ9BZF9 1416 aa19.7■□□□□ 0.74
COPS7B-203ENST00000373608 TCOF1Q13428 1488 aaKnown RBP19.7■□□□□ 0.74
COPS7B-203ENST00000373608 SIN3AQ96ST3 1273 aa19.7■□□□□ 0.74
COPS7B-203ENST00000373608 KIAA0586Q9BVV6 1533 aa19.68■□□□□ 0.74
COPS7B-203ENST00000373608 EIF4G3O43432 1585 aaKnown RBP19.68■□□□□ 0.74
COPS7B-203ENST00000373608 NAIPQ13075 1403 aa19.67■□□□□ 0.74
COPS7B-203ENST00000373608 KIAA0556O60303 1618 aa19.66■□□□□ 0.74
COPS7B-203ENST00000373608 GCC2Q8IWJ2 1684 aa19.65■□□□□ 0.74
COPS7B-203ENST00000373608 MIA2Q96PC5 1412 aa19.64■□□□□ 0.74
COPS7B-203ENST00000373608 GRIN2AQ12879 1464 aa19.64■□□□□ 0.73
COPS7B-203ENST00000373608 CDK13Q14004 1512 aaKnown RBP19.63■□□□□ 0.73
COPS7B-203ENST00000373608 AKNAQ7Z591 1439 aa19.62■□□□□ 0.73
COPS7B-203ENST00000373608 DISP1Q96F81 1524 aa19.61■□□□□ 0.73
COPS7B-203ENST00000373608 ERCC6Q03468 1493 aa19.61■□□□□ 0.73
COPS7B-203ENST00000373608 MAGI1Q96QZ7 1491 aaPredicted RBP19.6■□□□□ 0.73
COPS7B-203ENST00000373608 PPP1R15AO75807 674 aaPredicted RBP19.6■□□□□ 0.73
COPS7B-203ENST00000373608 TONSLQ96HA7 1378 aa19.58■□□□□ 0.73
COPS7B-203ENST00000373608 RAPGEF6Q8TEU7 1601 aa19.58■□□□□ 0.73
COPS7B-203ENST00000373608 SYNJ2O15056 1496 aa19.53■□□□□ 0.72
COPS7B-203ENST00000373608 NUP153P49790 1475 aaKnown RBP19.53■□□□□ 0.72
COPS7B-203ENST00000373608 KLHL34Q8N239 644 aa19.5■□□□□ 0.71
COPS7B-203ENST00000373608 CEP170Q5SW79 1584 aa19.5■□□□□ 0.71
COPS7B-203ENST00000373608 CDK11AQ9UQ88 783 aaPredicted RBP19.49■□□□□ 0.71
COPS7B-203ENST00000373608 RRP7BPQ9NSQ0 103 aa19.49■□□□□ 0.71
COPS7B-203ENST00000373608 DNMT1P26358 1616 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms