RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 RIMBP3BA6NNM3 1639 aa30.83■■■□□ 2.53
CDX4-201ENST00000373514 RIMBP3Q9UFD9 1639 aa30.83■■■□□ 2.53
CDX4-201ENST00000373514 SHROOM2Q13796 1616 aa30.83■■■□□ 2.53
CDX4-201ENST00000373514 KIF21BO75037 1637 aa30.82■■■□□ 2.52
CDX4-201ENST00000373514 ARHGEF11O15085 1522 aa30.79■■■□□ 2.52
CDX4-201ENST00000373514 KIAA0586Q9BVV6 1533 aa30.75■■■□□ 2.51
CDX4-201ENST00000373514 IQGAP2Q13576 1575 aa30.73■■■□□ 2.51
CDX4-201ENST00000373514 ERCC6L2Q5T890 1561 aa30.73■■■□□ 2.51
CDX4-201ENST00000373514 EHMT2Q96KQ7 1210 aa30.61■■■□□ 2.49
CDX4-201ENST00000373514 GOLGA3Q08378 1498 aa30.58■■■□□ 2.49
CDX4-201ENST00000373514 PRG4Q92954 1404 aaPredicted RBP30.58■■■□□ 2.49
CDX4-201ENST00000373514 ARAP1Q96P48 1450 aa30.58■■■□□ 2.49
CDX4-201ENST00000373514 JPH4Q96JJ6 628 aa30.56■■■□□ 2.48
CDX4-201ENST00000373514 UGGT2Q9NYU1 1516 aa30.53■■■□□ 2.48
CDX4-201ENST00000373514 KIAA0556O60303 1618 aa30.48■■■□□ 2.47
CDX4-201ENST00000373514 DISP1Q96F81 1524 aa30.46■■■□□ 2.47
CDX4-201ENST00000373514 SAMD9Q5K651 1589 aa30.38■■■□□ 2.45
CDX4-201ENST00000373514 UBTFP17480 764 aaKnown RBP30.37■■■□□ 2.45
CDX4-201ENST00000373514 CARMIL2Q6F5E8 1435 aa30.36■■■□□ 2.45
CDX4-201ENST00000373514 CYB5RLQ6IPT4 315 aa30.35■■■□□ 2.45
CDX4-201ENST00000373514 RANGAP1P46060 587 aaPredicted RBP30.31■■■□□ 2.44
CDX4-201ENST00000373514 TNIKQ9UKE5 1360 aa30.26■■■□□ 2.43
CDX4-201ENST00000373514 TTBK1Q5TCY1 1321 aaPredicted RBP30.25■■■□□ 2.43
CDX4-201ENST00000373514 EFCAB5A4FU69 1503 aa30.23■■■□□ 2.43
CDX4-201ENST00000373514 ADCY10Q96PN6 1610 aa30.21■■■□□ 2.43
CDX4-201ENST00000373514 PTPRGP23470 1445 aa30.2■■■□□ 2.42
CDX4-201ENST00000373514 P3H3Q8IVL6 736 aa30.19■■■□□ 2.42
CDX4-201ENST00000373514 FHOD3Q2V2M9 1422 aa30.17■■■□□ 2.42
CDX4-201ENST00000373514 LOC105371045A0A1W2PR82 267 aa30.16■■■□□ 2.42
CDX4-201ENST00000373514 ARHGAP35Q9NRY4 1499 aa30.14■■■□□ 2.42
CDX4-201ENST00000373514 PLB1Q6P1J6 1458 aa30.08■■■□□ 2.41
CDX4-201ENST00000373514 ABCA8O94911 1581 aa30.08■■■□□ 2.41
CDX4-201ENST00000373514 ABCC2Q92887 1545 aa30.06■■■□□ 2.4
CDX4-201ENST00000373514 UACAQ9BZF9 1416 aa30.04■■■□□ 2.4
CDX4-201ENST00000373514 RAPGEF6Q8TEU7 1601 aa30.02■■■□□ 2.4
CDX4-201ENST00000373514 CLIP1P30622 1438 aa30.02■■■□□ 2.4
CDX4-201ENST00000373514 UHRF1BP1LA0JNW5 1464 aa30.01■■■□□ 2.39
CDX4-201ENST00000373514 CEP162Q5TB80 1403 aa30■■■□□ 2.39
CDX4-201ENST00000373514 ZCCHC11Q5TAX3 1644 aaKnown RBP29.97■■■□□ 2.39
CDX4-201ENST00000373514 KDM5BQ9UGL1 1544 aa29.89■■■□□ 2.38
CDX4-201ENST00000373514 PCF11O94913 1555 aaKnown RBP29.89■■■□□ 2.38
CDX4-201ENST00000373514 LRRIQ1Q96JM4 1722 aa29.87■■■□□ 2.37
CDX4-201ENST00000373514 FMN1Q68DA7 1419 aa29.86■■■□□ 2.37
CDX4-201ENST00000373514 NUP153P49790 1475 aaKnown RBP29.86■■■□□ 2.37
CDX4-201ENST00000373514 MAPKBP1O60336 1514 aa29.85■■■□□ 2.37
CDX4-201ENST00000373514 HECW1Q76N89 1606 aa29.83■■■□□ 2.37
CDX4-201ENST00000373514 ARID3CA6NKF2 412 aa29.81■■■□□ 2.36
CDX4-201ENST00000373514 KIF13AQ9H1H9 1805 aa29.8■■■□□ 2.36
CDX4-201ENST00000373514 NPM1P06748 294 aaKnown RBP eCLIP29.78■■■□□ 2.36
CDX4-201ENST00000373514 ATP10BO94823 1461 aa29.75■■■□□ 2.35
CDX4-201ENST00000373514 CDK13Q14004 1512 aaKnown RBP29.74■■■□□ 2.35
CDX4-201ENST00000373514 ASXL2Q76L83 1435 aa29.74■■■□□ 2.35
CDX4-201ENST00000373514 DIP2BQ9P265 1576 aa29.73■■■□□ 2.35
CDX4-201ENST00000373514 CASKIN1Q8WXD9 1431 aa29.7■■■□□ 2.34
CDX4-201ENST00000373514 FYCO1Q9BQS8 1478 aa29.7■■■□□ 2.34
CDX4-201ENST00000373514 EPRSP07814 1512 aaKnown RBP29.68■■■□□ 2.34
CDX4-201ENST00000373514 ATP1B4Q9UN42 357 aaPredicted RBP29.66■■■□□ 2.34
CDX4-201ENST00000373514 WDR7Q9Y4E6 1490 aa29.65■■■□□ 2.34
CDX4-201ENST00000373514 ABCC10Q5T3U5 1492 aa29.64■■■□□ 2.34
CDX4-201ENST00000373514 TRHP20396 242 aaPredicted RBP29.62■■■□□ 2.33
CDX4-201ENST00000373514 VPS8Q8N3P4 1428 aa29.59■■■□□ 2.33
CDX4-201ENST00000373514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.59■■■□□ 2.33
CDX4-201ENST00000373514 HNRNPUL2Q1KMD3 747 aaKnown RBP29.59■■■□□ 2.33
CDX4-201ENST00000373514 CCDC18Q5T9S5 1454 aa29.57■■■□□ 2.32
CDX4-201ENST00000373514 TSPOAP1O95153 1857 aa29.56■■■□□ 2.32
CDX4-201ENST00000373514 CFAP43Q8NDM7 1665 aa29.54■■■□□ 2.32
CDX4-201ENST00000373514 GLI2P10070 1586 aa29.54■■■□□ 2.32
CDX4-201ENST00000373514 MAP3K4Q9Y6R4 1608 aa29.51■■■□□ 2.32
CDX4-201ENST00000373514 MAGI3Q5TCQ9 1506 aa29.51■■■□□ 2.31
CDX4-201ENST00000373514 FAM69CQ0P6D2 419 aa29.49■■■□□ 2.31
CDX4-201ENST00000373514 PPRC1Q5VV67 1664 aaKnown RBP29.48■■■□□ 2.31
CDX4-201ENST00000373514 KIF14Q15058 1648 aa29.47■■■□□ 2.31
CDX4-201ENST00000373514 ABCA9Q8IUA7 1624 aa29.45■■■□□ 2.31
CDX4-201ENST00000373514 KCNH8Q96L42 1107 aa29.45■■■□□ 2.3
CDX4-201ENST00000373514 TTC37Q6PGP7 1564 aa29.43■■■□□ 2.3
CDX4-201ENST00000373514 TIAM1Q13009 1591 aa29.42■■■□□ 2.3
CDX4-201ENST00000373514 PLEKHD1A6NEE1 506 aa29.4■■■□□ 2.3
CDX4-201ENST00000373514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.39■■■□□ 2.29
CDX4-201ENST00000373514 TROQ12816 1431 aaPredicted RBP29.38■■■□□ 2.29
CDX4-201ENST00000373514 EHBP1L1Q8N3D4 1523 aa29.32■■■□□ 2.28
CDX4-201ENST00000373514 CDK11AQ9UQ88 783 aaPredicted RBP29.31■■■□□ 2.28
CDX4-201ENST00000373514 MYO5CQ9NQX4 1742 aa29.31■■■□□ 2.28
CDX4-201ENST00000373514 CD109Q6YHK3 1445 aa29.29■■■□□ 2.28
CDX4-201ENST00000373514 MAP3K1Q13233 1512 aa29.26■■■□□ 2.27
CDX4-201ENST00000373514 MTUS2Q5JR59 1369 aa29.24■■■□□ 2.27
CDX4-201ENST00000373514 CDC42BPAQ5VT25 1732 aa29.24■■■□□ 2.27
CDX4-201ENST00000373514 SUPT6HQ7KZ85 1726 aaKnown RBP29.22■■■□□ 2.27
CDX4-201ENST00000373514 LRRC9Q6ZRR7 1453 aa29.21■■■□□ 2.27
CDX4-201ENST00000373514 PREX2Q70Z35 1606 aa29.21■■■□□ 2.27
CDX4-201ENST00000373514 CDC42BPBQ9Y5S2 1711 aa29.21■■■□□ 2.27
CDX4-201ENST00000373514 TEX14Q8IWB6 1497 aa29.2■■■□□ 2.26
CDX4-201ENST00000373514 KDM6BO15054 1643 aa29.15■■■□□ 2.26
CDX4-201ENST00000373514 KANK4Q5T7N3 995 aaPredicted RBP29.15■■■□□ 2.26
CDX4-201ENST00000373514 CFAP74Q9C0B2 1584 aa29.14■■■□□ 2.25
CDX4-201ENST00000373514 ITSN2Q9NZM3 1697 aa29.12■■■□□ 2.25
CDX4-201ENST00000373514 NCOA2Q15596 1464 aa29.1■■■□□ 2.25
CDX4-201ENST00000373514 ARHGAP5Q13017 1502 aa29.1■■■□□ 2.25
CDX4-201ENST00000373514 ARAP3Q8WWN8 1544 aa29.1■■■□□ 2.25
CDX4-201ENST00000373514 PLCH2O75038 1416 aa29.1■■■□□ 2.25
CDX4-201ENST00000373514 FANCAO15360 1455 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms