RNA–Protein interactions for RNA: ENST00000373088.5

PCDH11X-204, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-204ENST00000373088 ERICH3Q5RHP9 1530 aa6.76□□□□□ -1.33
PCDH11X-204ENST00000373088 ARAP1Q96P48 1450 aa6.76□□□□□ -1.33
PCDH11X-204ENST00000373088 MTUS2Q5JR59 1369 aa6.75□□□□□ -1.33
PCDH11X-204ENST00000373088 ARHGAP35Q9NRY4 1499 aa6.75□□□□□ -1.33
PCDH11X-204ENST00000373088 ZNF608Q9ULD9 1512 aaPredicted RBP6.74□□□□□ -1.33
PCDH11X-204ENST00000373088 FHAD1B1AJZ9 1412 aa6.74□□□□□ -1.33
PCDH11X-204ENST00000373088 ZNF777Q9ULD5 760 aaPredicted RBP6.73□□□□□ -1.33
PCDH11X-204ENST00000373088 KIF21AQ7Z4S6 1674 aa6.73□□□□□ -1.33
PCDH11X-204ENST00000373088 GRIN2BQ13224 1484 aa6.72□□□□□ -1.33
PCDH11X-204ENST00000373088 IFT140Q96RY7 1462 aa6.72□□□□□ -1.33
PCDH11X-204ENST00000373088 JPH4Q96JJ6 628 aa6.72□□□□□ -1.33
PCDH11X-204ENST00000373088 CHIC2Q9UKJ5 165 aa6.72□□□□□ -1.33
PCDH11X-204ENST00000373088 CDK11AQ9UQ88 783 aaPredicted RBP6.72□□□□□ -1.33
PCDH11X-204ENST00000373088 NEUROD1Q13562 356 aa6.7□□□□□ -1.34
PCDH11X-204ENST00000373088 FMN1Q68DA7 1419 aa6.7□□□□□ -1.34
PCDH11X-204ENST00000373088 PRDM2Q13029 1718 aa6.7□□□□□ -1.34
PCDH11X-204ENST00000373088 SNAPC4Q5SXM2 1469 aa6.69□□□□□ -1.34
PCDH11X-204ENST00000373088 CCNB3Q8WWL7 1395 aa6.69□□□□□ -1.34
PCDH11X-204ENST00000373088 TRIM52Q96A61 297 aa6.69□□□□□ -1.34
PCDH11X-204ENST00000373088 KCNH8Q96L42 1107 aa6.67□□□□□ -1.34
PCDH11X-204ENST00000373088 PLEKHD1A6NEE1 506 aa6.66□□□□□ -1.34
PCDH11X-204ENST00000373088 RRP7BPQ9NSQ0 103 aa6.66□□□□□ -1.34
PCDH11X-204ENST00000373088 MYT1LQ9UL68 1186 aa6.66□□□□□ -1.34
PCDH11X-204ENST00000373088 CARMIL2Q6F5E8 1435 aa6.65□□□□□ -1.35
PCDH11X-204ENST00000373088 PHLDB1Q86UU1 1377 aa6.64□□□□□ -1.35
PCDH11X-204ENST00000373088 CUL7Q14999 1698 aa6.64□□□□□ -1.35
PCDH11X-204ENST00000373088 CFDP1Q9UEE9 299 aaPredicted RBP6.63□□□□□ -1.35
PCDH11X-204ENST00000373088 CASKIN1Q8WXD9 1431 aa6.63□□□□□ -1.35
PCDH11X-204ENST00000373088 WDR62O43379 1518 aa6.63□□□□□ -1.35
PCDH11X-204ENST00000373088 LRRC9Q6ZRR7 1453 aa6.62□□□□□ -1.35
PCDH11X-204ENST00000373088 TARBP1Q13395 1621 aaKnown RBP6.62□□□□□ -1.35
PCDH11X-204ENST00000373088 GRIN2AQ12879 1464 aa6.62□□□□□ -1.35
PCDH11X-204ENST00000373088 SENP3Q9H4L4 574 aaPredicted RBP6.61□□□□□ -1.35
PCDH11X-204ENST00000373088 ABCA5Q8WWZ7 1642 aa6.61□□□□□ -1.35
PCDH11X-204ENST00000373088 KIAA0586Q9BVV6 1533 aa6.61□□□□□ -1.35
PCDH11X-204ENST00000373088 EFCAB5A4FU69 1503 aa6.61□□□□□ -1.35
PCDH11X-204ENST00000373088 SYNJ2O15056 1496 aa6.6□□□□□ -1.35
PCDH11X-204ENST00000373088 PTPRGP23470 1445 aa6.6□□□□□ -1.35
PCDH11X-204ENST00000373088 DIEXFQ68CQ4 756 aaKnown RBP6.6□□□□□ -1.35
PCDH11X-204ENST00000373088 IQGAP2Q13576 1575 aa6.6□□□□□ -1.35
PCDH11X-204ENST00000373088 SIN3AQ96ST3 1273 aa6.6□□□□□ -1.35
PCDH11X-204ENST00000373088 FYCO1Q9BQS8 1478 aa6.59□□□□□ -1.35
PCDH11X-204ENST00000373088 MAGI1Q96QZ7 1491 aaPredicted RBP6.59□□□□□ -1.35
PCDH11X-204ENST00000373088 NPM1P06748 294 aaKnown RBP eCLIP6.59□□□□□ -1.35
PCDH11X-204ENST00000373088 RAB3GAP2Q9H2M9 1393 aa6.59□□□□□ -1.35
PCDH11X-204ENST00000373088 PCF11O94913 1555 aaKnown RBP6.59□□□□□ -1.35
PCDH11X-204ENST00000373088 PRG4Q92954 1404 aaPredicted RBP6.59□□□□□ -1.35
PCDH11X-204ENST00000373088 ZNF644Q9H582 1327 aaPredicted RBP6.58□□□□□ -1.36
PCDH11X-204ENST00000373088 ZNF316A6NFI3 1004 aaPredicted RBP6.58□□□□□ -1.36
PCDH11X-204ENST00000373088 TSPY4P0CV99 314 aa6.58□□□□□ -1.36
PCDH11X-204ENST00000373088 TSPY10P0CW01 314 aa6.58□□□□□ -1.36
PCDH11X-204ENST00000373088 TIAM1Q13009 1591 aa6.58□□□□□ -1.36
PCDH11X-204ENST00000373088 EIF4G3O43432 1585 aaKnown RBP6.58□□□□□ -1.36
PCDH11X-204ENST00000373088 ADAMTS12P58397 1594 aa6.58□□□□□ -1.36
PCDH11X-204ENST00000373088 SETD5Q9C0A6 1442 aa6.57□□□□□ -1.36
PCDH11X-204ENST00000373088 RRBP1Q9P2E9 1410 aaKnown RBP6.56□□□□□ -1.36
PCDH11X-204ENST00000373088 CDK13Q14004 1512 aaKnown RBP6.56□□□□□ -1.36
PCDH11X-204ENST00000373088 NCOA2Q15596 1464 aa6.56□□□□□ -1.36
PCDH11X-204ENST00000373088 OSCARQ8IYS5 282 aa6.56□□□□□ -1.36
PCDH11X-204ENST00000373088 YTHDC1Q96MU7 727 aaKnown RBP6.56□□□□□ -1.36
PCDH11X-204ENST00000373088 PLB1Q6P1J6 1458 aa6.56□□□□□ -1.36
PCDH11X-204ENST00000373088 FGD6Q6ZV73 1430 aa6.56□□□□□ -1.36
PCDH11X-204ENST00000373088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.55□□□□□ -1.36
PCDH11X-204ENST00000373088 ZNF326Q5BKZ1 582 aaKnown RBP6.55□□□□□ -1.36
PCDH11X-204ENST00000373088 DHX57Q6P158 1386 aaKnown RBP6.55□□□□□ -1.36
PCDH11X-204ENST00000373088 CCDC18Q5T9S5 1454 aa6.55□□□□□ -1.36
PCDH11X-204ENST00000373088 THOC2Q8NI27 1593 aaKnown RBP6.55□□□□□ -1.36
PCDH11X-204ENST00000373088 PBRM1Q86U86 1689 aa6.55□□□□□ -1.36
PCDH11X-204ENST00000373088 HNRNPMP52272 730 aaKnown RBP eCLIP6.55□□□□□ -1.36
PCDH11X-204ENST00000373088 FOXD1Q16676 465 aa6.54□□□□□ -1.36
PCDH11X-204ENST00000373088 SLC4A1APQ9BWU0 796 aaKnown RBP6.54□□□□□ -1.36
PCDH11X-204ENST00000373088 EPRSP07814 1512 aaKnown RBP6.54□□□□□ -1.36
PCDH11X-204ENST00000373088 MYOM3Q5VTT5 1437 aa6.54□□□□□ -1.36
PCDH11X-204ENST00000373088 HIRIP3Q9BW71 556 aaPredicted RBP6.54□□□□□ -1.36
PCDH11X-204ENST00000373088 WDR97A6NE52 1622 aa6.54□□□□□ -1.36
PCDH11X-204ENST00000373088 CTTNBP2Q8WZ74 1663 aa6.54□□□□□ -1.36
PCDH11X-204ENST00000373088 TONSLQ96HA7 1378 aa6.53□□□□□ -1.36
PCDH11X-204ENST00000373088 POLR3GLQ9BT43 218 aa6.52□□□□□ -1.37
PCDH11X-204ENST00000373088 MAP3K1Q13233 1512 aa6.51□□□□□ -1.37
PCDH11X-204ENST00000373088 DISP1Q96F81 1524 aa6.51□□□□□ -1.37
PCDH11X-204ENST00000373088 CLSPNQ9HAW4 1339 aa6.51□□□□□ -1.37
PCDH11X-204ENST00000373088 NUP160Q12769 1436 aa6.51□□□□□ -1.37
PCDH11X-204ENST00000373088 UGGT2Q9NYU1 1516 aa6.51□□□□□ -1.37
PCDH11X-204ENST00000373088 CNGB1Q14028 1251 aaPredicted RBP6.5□□□□□ -1.37
PCDH11X-204ENST00000373088 CYB5RLQ6IPT4 315 aa6.5□□□□□ -1.37
PCDH11X-204ENST00000373088 HECW1Q76N89 1606 aa6.5□□□□□ -1.37
PCDH11X-204ENST00000373088 CEP170Q5SW79 1584 aa6.5□□□□□ -1.37
PCDH11X-204ENST00000373088 TROQ12816 1431 aaPredicted RBP6.49□□□□□ -1.37
PCDH11X-204ENST00000373088 NUP153P49790 1475 aaKnown RBP6.49□□□□□ -1.37
PCDH11X-204ENST00000373088 EHBP1L1Q8N3D4 1523 aa6.49□□□□□ -1.37
PCDH11X-204ENST00000373088 MPHOSPH9Q99550 1183 aa6.49□□□□□ -1.37
PCDH11X-204ENST00000373088 SAMD9Q5K651 1589 aa6.49□□□□□ -1.37
PCDH11X-204ENST00000373088 KIAA0556O60303 1618 aa6.48□□□□□ -1.37
PCDH11X-204ENST00000373088 EFCAB2Q5VUJ9 269 aa6.48□□□□□ -1.37
PCDH11X-204ENST00000373088 UACAQ9BZF9 1416 aa6.48□□□□□ -1.37
PCDH11X-204ENST00000373088 KDM2AQ9Y2K7 1162 aa6.47□□□□□ -1.37
PCDH11X-204ENST00000373088 PTPRKQ15262 1439 aa6.47□□□□□ -1.37
PCDH11X-204ENST00000373088 DDX10Q13206 875 aaKnown RBP6.46□□□□□ -1.37
PCDH11X-204ENST00000373088 PKD2Q13563 968 aa6.46□□□□□ -1.37
PCDH11X-204ENST00000373088 ATP10BO94823 1461 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms