RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 CARMIL1Q5VZK9 1371 aa25.85■■□□□ 1.73
HNF4A-203ENST00000372920 SIN3AQ96ST3 1273 aa25.83■■□□□ 1.73
HNF4A-203ENST00000372920 WDR97A6NE52 1622 aa25.83■■□□□ 1.73
HNF4A-203ENST00000372920 FAM50AQ14320 339 aaKnown RBP25.81■■□□□ 1.72
HNF4A-203ENST00000372920 DDX10Q13206 875 aaKnown RBP25.81■■□□□ 1.72
HNF4A-203ENST00000372920 PRDM2Q13029 1718 aa25.77■■□□□ 1.72
HNF4A-203ENST00000372920 FHAD1B1AJZ9 1412 aa25.76■■□□□ 1.71
HNF4A-203ENST00000372920 FGD5Q6ZNL6 1462 aa25.74■■□□□ 1.71
HNF4A-203ENST00000372920 PPP1R15AO75807 674 aaPredicted RBP25.72■■□□□ 1.71
HNF4A-203ENST00000372920 CFAP43Q8NDM7 1665 aa25.72■■□□□ 1.71
HNF4A-203ENST00000372920 TIMELESSQ9UNS1 1208 aa25.71■■□□□ 1.71
HNF4A-203ENST00000372920 PCF11O94913 1555 aaKnown RBP25.71■■□□□ 1.71
HNF4A-203ENST00000372920 P3H3Q8IVL6 736 aa25.7■■□□□ 1.7
HNF4A-203ENST00000372920 BCANQ96GW7 911 aa25.69■■□□□ 1.7
HNF4A-203ENST00000372920 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
HNF4A-203ENST00000372920 FKBP8Q14318 412 aa25.66■■□□□ 1.7
HNF4A-203ENST00000372920 ATP1B4Q9UN42 357 aaPredicted RBP25.66■■□□□ 1.7
HNF4A-203ENST00000372920 HIRIP3Q9BW71 556 aaPredicted RBP25.63■■□□□ 1.69
HNF4A-203ENST00000372920 FHOD3Q2V2M9 1422 aa25.6■■□□□ 1.69
HNF4A-203ENST00000372920 ANP32EQ9BTT0 268 aa25.58■■□□□ 1.69
HNF4A-203ENST00000372920 CCER2I3L3R5 266 aa25.58■■□□□ 1.68
HNF4A-203ENST00000372920 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.58■■□□□ 1.682e-7■□□□□ 10.3
HNF4A-203ENST00000372920 FYCO1Q9BQS8 1478 aa25.57■■□□□ 1.68
HNF4A-203ENST00000372920 ANP32CO43423 234 aa25.55■■□□□ 1.68
HNF4A-203ENST00000372920 CASKIN1Q8WXD9 1431 aa25.54■■□□□ 1.68
HNF4A-203ENST00000372920 TRIM52Q96A61 297 aa25.52■■□□□ 1.68
HNF4A-203ENST00000372920 EFCAB5A4FU69 1503 aa25.5■■□□□ 1.67
HNF4A-203ENST00000372920 NEFLP07196 543 aa25.5■■□□□ 1.67
HNF4A-203ENST00000372920 AQRO60306 1485 aaKnown RBP eCLIP25.5■■□□□ 1.672e-7■■■■□ 26.1
HNF4A-203ENST00000372920 TONSLQ96HA7 1378 aa25.47■■□□□ 1.67
HNF4A-203ENST00000372920 FGD6Q6ZV73 1430 aa25.47■■□□□ 1.67
HNF4A-203ENST00000372920 RAD54L2Q9Y4B4 1467 aa25.45■■□□□ 1.66
HNF4A-203ENST00000372920 FANCD2Q9BXW9 1451 aa25.45■■□□□ 1.66
HNF4A-203ENST00000372920 CCDC18Q5T9S5 1454 aa25.43■■□□□ 1.66
HNF4A-203ENST00000372920 ABCA10Q8WWZ4 1543 aa25.42■■□□□ 1.66
HNF4A-203ENST00000372920 PTPRKQ15262 1439 aa25.39■■□□□ 1.66
HNF4A-203ENST00000372920 HFM1A2PYH4 1435 aa25.39■■□□□ 1.65
HNF4A-203ENST00000372920 UACAQ9BZF9 1416 aa25.39■■□□□ 1.65
HNF4A-203ENST00000372920 FMN1Q68DA7 1419 aa25.39■■□□□ 1.65
HNF4A-203ENST00000372920 DNMBPQ6XZF7 1577 aa25.37■■□□□ 1.65
HNF4A-203ENST00000372920 POLA1P09884 1462 aaPredicted RBP25.36■■□□□ 1.65
HNF4A-203ENST00000372920 SNAPC4Q5SXM2 1469 aa25.36■■□□□ 1.65
HNF4A-203ENST00000372920 CC2D2AQ9P2K1 1620 aa25.36■■□□□ 1.65
HNF4A-203ENST00000372920 RBM19Q9Y4C8 960 aaKnown RBP25.35■■□□□ 1.65
HNF4A-203ENST00000372920 MTUS2Q5JR59 1369 aa25.35■■□□□ 1.65
HNF4A-203ENST00000372920 PTPN23Q9H3S7 1636 aa25.34■■□□□ 1.65
HNF4A-203ENST00000372920 CUL7Q14999 1698 aa25.34■■□□□ 1.65
HNF4A-203ENST00000372920 CTTNBP2Q8WZ74 1663 aa25.34■■□□□ 1.65
HNF4A-203ENST00000372920 TOPBP1Q92547 1522 aa25.33■■□□□ 1.65
HNF4A-203ENST00000372920 NAIPQ13075 1403 aa25.3■■□□□ 1.64
HNF4A-203ENST00000372920 NCOA2Q15596 1464 aa25.26■■□□□ 1.63
HNF4A-203ENST00000372920 KDM5BQ9UGL1 1544 aa25.25■■□□□ 1.63
HNF4A-203ENST00000372920 MYOM3Q5VTT5 1437 aa25.25■■□□□ 1.63
HNF4A-203ENST00000372920 LRRIQ1Q96JM4 1722 aa25.2■■□□□ 1.63
HNF4A-203ENST00000372920 HNRNPUQ00839 825 aaKnown RBP eCLIP25.2■■□□□ 1.62
HNF4A-203ENST00000372920 SAMD9Q5K651 1589 aa25.2■■□□□ 1.62
HNF4A-203ENST00000372920 GRIN2BQ13224 1484 aa25.19■■□□□ 1.62
HNF4A-203ENST00000372920 NESP48681 1621 aa25.16■■□□□ 1.62
HNF4A-203ENST00000372920 SUPT6HQ7KZ85 1726 aaKnown RBP25.15■■□□□ 1.62
HNF4A-203ENST00000372920 WASHC2AQ641Q2 1341 aa25.15■■□□□ 1.62
HNF4A-203ENST00000372920 HSPA5P11021 654 aaKnown RBP25.14■■□□□ 1.61
HNF4A-203ENST00000372920 EHBP1L1Q8N3D4 1523 aa25.13■■□□□ 1.61
HNF4A-203ENST00000372920 THOC2Q8NI27 1593 aaKnown RBP25.12■■□□□ 1.61
HNF4A-203ENST00000372920 RRP7BPQ9NSQ0 103 aa25.12■■□□□ 1.61
HNF4A-203ENST00000372920 UGGT2Q9NYU1 1516 aa25.1■■□□□ 1.61
HNF4A-203ENST00000372920 TDRD9Q8NDG6 1382 aaKnown RBP25.1■■□□□ 1.61
HNF4A-203ENST00000372920 IRX6P78412 446 aaPredicted RBP25.09■■□□□ 1.61
HNF4A-203ENST00000372920 DENND4BO75064 1496 aaPredicted RBP25.08■■□□□ 1.61
HNF4A-203ENST00000372920 ARHGEF11O15085 1522 aa25.08■■□□□ 1.6
HNF4A-203ENST00000372920 CHIC2Q9UKJ5 165 aa25.07■■□□□ 1.6
HNF4A-203ENST00000372920 URB2Q14146 1524 aaKnown RBP25.06■■□□□ 1.6
HNF4A-203ENST00000372920 MAGI3Q5TCQ9 1506 aa25.06■■□□□ 1.6
HNF4A-203ENST00000372920 ABCA5Q8WWZ7 1642 aa25.05■■□□□ 1.6
HNF4A-203ENST00000372920 MSH5O43196 834 aa25.04■■□□□ 1.6
HNF4A-203ENST00000372920 EIF4G2P78344 907 aaKnown RBP eCLIP25.04■■□□□ 1.6
HNF4A-203ENST00000372920 GAPVD1Q14C86 1478 aa25.03■■□□□ 1.6
HNF4A-203ENST00000372920 TCOF1Q13428 1488 aaKnown RBP25.03■■□□□ 1.6
HNF4A-203ENST00000372920 HECW1Q76N89 1606 aa25.02■■□□□ 1.6
HNF4A-203ENST00000372920 CDK11AQ9UQ88 783 aaPredicted RBP25.01■■□□□ 1.59
HNF4A-203ENST00000372920 GCC2Q8IWJ2 1684 aa25.01■■□□□ 1.59
HNF4A-203ENST00000372920 CNTLNQ9NXG0 1405 aa25■■□□□ 1.59
HNF4A-203ENST00000372920 CCDC184Q52MB2 194 aa24.99■■□□□ 1.59
HNF4A-203ENST00000372920 KDM6BO15054 1643 aa24.98■■□□□ 1.59
HNF4A-203ENST00000372920 AKNAQ7Z591 1439 aa24.98■■□□□ 1.59
HNF4A-203ENST00000372920 MPHOSPH9Q99550 1183 aa24.97■■□□□ 1.59
HNF4A-203ENST00000372920 FANCIQ9NVI1 1328 aa24.97■■□□□ 1.59
HNF4A-203ENST00000372920 BCL11AQ9H165 835 aa24.96■■□□□ 1.59
HNF4A-203ENST00000372920 L3MBTL2Q969R5 705 aa24.96■■□□□ 1.59
HNF4A-203ENST00000372920 ERICH6BQ5W0A0 696 aa24.94■■□□□ 1.58
HNF4A-203ENST00000372920 C11orf95C9JLR9 678 aaPredicted RBP24.94■■□□□ 1.58
HNF4A-203ENST00000372920 KIF21AQ7Z4S6 1674 aa24.94■■□□□ 1.58
HNF4A-203ENST00000372920 NCOA1Q15788 1441 aa24.92■■□□□ 1.58
HNF4A-203ENST00000372920 PRKRIP1Q9H875 184 aaPredicted RBP24.91■■□□□ 1.58
HNF4A-203ENST00000372920 CCDC7Q96M83 1385 aa24.91■■□□□ 1.58
HNF4A-203ENST00000372920 LAMC3Q9Y6N6 1575 aa24.91■■□□□ 1.58
HNF4A-203ENST00000372920 FOXD1Q16676 465 aa24.91■■□□□ 1.58
HNF4A-203ENST00000372920 PPP4R2Q9NY27 417 aa24.9■■□□□ 1.58
HNF4A-203ENST00000372920 MIA2Q96PC5 1412 aa24.88■■□□□ 1.57
HNF4A-203ENST00000372920 EPRSP07814 1512 aaKnown RBP24.88■■□□□ 1.57
HNF4A-203ENST00000372920 FAM9BQ8IZU0 186 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms