RNA–Protein interactions for RNA: ENST00000372097.9

GTF3C5-202, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-202ENST00000372097 RAB3GAP2Q9H2M9 1393 aa27.56■■■□□ 2
GTF3C5-202ENST00000372097 ITGAEP38570 1179 aa27.53■■■□□ 2
GTF3C5-202ENST00000372097 ANP32EQ9BTT0 268 aa27.53■■■□□ 2
GTF3C5-202ENST00000372097 RAD54L2Q9Y4B4 1467 aa27.49■■□□□ 1.99
GTF3C5-202ENST00000372097 DNMBPQ6XZF7 1577 aa27.48■■□□□ 1.99
GTF3C5-202ENST00000372097 TOPBP1Q92547 1522 aa27.46■■□□□ 1.99
GTF3C5-202ENST00000372097 POLA1P09884 1462 aaPredicted RBP27.43■■□□□ 1.98
GTF3C5-202ENST00000372097 MAP3K1Q13233 1512 aa27.41■■□□□ 1.98
GTF3C5-202ENST00000372097 SETD5Q9C0A6 1442 aa27.41■■□□□ 1.98
GTF3C5-202ENST00000372097 ABCA10Q8WWZ4 1543 aa27.38■■□□□ 1.97
GTF3C5-202ENST00000372097 DDX10Q13206 875 aaKnown RBP27.38■■□□□ 1.97
GTF3C5-202ENST00000372097 TIAM1Q13009 1591 aa27.38■■□□□ 1.97
GTF3C5-202ENST00000372097 WDR97A6NE52 1622 aa27.37■■□□□ 1.97
GTF3C5-202ENST00000372097 FKBP8Q14318 412 aa27.36■■□□□ 1.97
GTF3C5-202ENST00000372097 BCANQ96GW7 911 aa27.36■■□□□ 1.97
GTF3C5-202ENST00000372097 DNAJC5BQ9UF47 199 aa27.36■■□□□ 1.97
GTF3C5-202ENST00000372097 PPP1R15AO75807 674 aaPredicted RBP27.33■■□□□ 1.97
GTF3C5-202ENST00000372097 P3H3Q8IVL6 736 aa27.33■■□□□ 1.97
GTF3C5-202ENST00000372097 LAMC3Q9Y6N6 1575 aa27.32■■□□□ 1.96
GTF3C5-202ENST00000372097 SIN3AQ96ST3 1273 aa27.31■■□□□ 1.96
GTF3C5-202ENST00000372097 LRRC9Q6ZRR7 1453 aa27.3■■□□□ 1.96
GTF3C5-202ENST00000372097 TIMELESSQ9UNS1 1208 aa27.29■■□□□ 1.96
GTF3C5-202ENST00000372097 URB2Q14146 1524 aaKnown RBP27.28■■□□□ 1.96
GTF3C5-202ENST00000372097 PHLDB1Q86UU1 1377 aa27.28■■□□□ 1.96
GTF3C5-202ENST00000372097 CCER2I3L3R5 266 aa27.22■■□□□ 1.95
GTF3C5-202ENST00000372097 ATP1B4Q9UN42 357 aaPredicted RBP27.21■■□□□ 1.95
GTF3C5-202ENST00000372097 FHAD1B1AJZ9 1412 aa27.2■■□□□ 1.94
GTF3C5-202ENST00000372097 CUL7Q14999 1698 aa27.18■■□□□ 1.94
GTF3C5-202ENST00000372097 TDRD9Q8NDG6 1382 aaKnown RBP27.18■■□□□ 1.94
GTF3C5-202ENST00000372097 FAM50AQ14320 339 aaKnown RBP27.18■■□□□ 1.94
GTF3C5-202ENST00000372097 FHOD3Q2V2M9 1422 aa27.18■■□□□ 1.94
GTF3C5-202ENST00000372097 PDS5BQ9NTI5 1447 aa27.17■■□□□ 1.94
GTF3C5-202ENST00000372097 NEFLP07196 543 aa27.17■■□□□ 1.94
GTF3C5-202ENST00000372097 RBM19Q9Y4C8 960 aaKnown RBP27.15■■□□□ 1.94
GTF3C5-202ENST00000372097 PCF11O94913 1555 aaKnown RBP27.15■■□□□ 1.94
GTF3C5-202ENST00000372097 ANP32CO43423 234 aa27.12■■□□□ 1.93
GTF3C5-202ENST00000372097 TRIM52Q96A61 297 aa27.11■■□□□ 1.93
GTF3C5-202ENST00000372097 HIRIP3Q9BW71 556 aaPredicted RBP27.11■■□□□ 1.93
GTF3C5-202ENST00000372097 KIF21AQ7Z4S6 1674 aa27.09■■□□□ 1.93
GTF3C5-202ENST00000372097 CTTNBP2Q8WZ74 1663 aa27.09■■□□□ 1.93
GTF3C5-202ENST00000372097 CFAP43Q8NDM7 1665 aa27.09■■□□□ 1.93
GTF3C5-202ENST00000372097 EFCAB5A4FU69 1503 aa27.07■■□□□ 1.92
GTF3C5-202ENST00000372097 GAPVD1Q14C86 1478 aa27.06■■□□□ 1.92
GTF3C5-202ENST00000372097 ABCA5Q8WWZ7 1642 aa27.05■■□□□ 1.92
GTF3C5-202ENST00000372097 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.04■■□□□ 1.92
GTF3C5-202ENST00000372097 FYCO1Q9BQS8 1478 aa27.01■■□□□ 1.91
GTF3C5-202ENST00000372097 BCL11AQ9H165 835 aa27■■□□□ 1.91
GTF3C5-202ENST00000372097 CASKIN1Q8WXD9 1431 aa26.99■■□□□ 1.91
GTF3C5-202ENST00000372097 AQRO60306 1485 aaKnown RBP eCLIP26.94■■□□□ 1.92e-7■■■■■ 34.1
GTF3C5-202ENST00000372097 FMN1Q68DA7 1419 aa26.93■■□□□ 1.9
GTF3C5-202ENST00000372097 TONSLQ96HA7 1378 aa26.92■■□□□ 1.9
GTF3C5-202ENST00000372097 TARBP1Q13395 1621 aaKnown RBP26.91■■□□□ 1.9
GTF3C5-202ENST00000372097 SNAPC4Q5SXM2 1469 aa26.87■■□□□ 1.89
GTF3C5-202ENST00000372097 SAMD9Q5K651 1589 aa26.85■■□□□ 1.89
GTF3C5-202ENST00000372097 FGD6Q6ZV73 1430 aa26.85■■□□□ 1.89
GTF3C5-202ENST00000372097 CCDC18Q5T9S5 1454 aa26.84■■□□□ 1.89
GTF3C5-202ENST00000372097 UACAQ9BZF9 1416 aa26.84■■□□□ 1.89
GTF3C5-202ENST00000372097 MSH5O43196 834 aa26.84■■□□□ 1.89
GTF3C5-202ENST00000372097 HFM1A2PYH4 1435 aa26.81■■□□□ 1.88
GTF3C5-202ENST00000372097 MTUS2Q5JR59 1369 aa26.79■■□□□ 1.88
GTF3C5-202ENST00000372097 PTPRKQ15262 1439 aa26.79■■□□□ 1.88
GTF3C5-202ENST00000372097 FANCIQ9NVI1 1328 aa26.76■■□□□ 1.87
GTF3C5-202ENST00000372097 HNRNPUQ00839 825 aaKnown RBP eCLIP26.76■■□□□ 1.87
GTF3C5-202ENST00000372097 LRRIQ1Q96JM4 1722 aa26.76■■□□□ 1.87
GTF3C5-202ENST00000372097 PBRM1Q86U86 1689 aa26.75■■□□□ 1.87
GTF3C5-202ENST00000372097 MRC2Q9UBG0 1479 aa26.75■■□□□ 1.87
GTF3C5-202ENST00000372097 KDM5BQ9UGL1 1544 aa26.75■■□□□ 1.87
GTF3C5-202ENST00000372097 PTPN23Q9H3S7 1636 aa26.74■■□□□ 1.87
GTF3C5-202ENST00000372097 GRIN2BQ13224 1484 aa26.73■■□□□ 1.87
GTF3C5-202ENST00000372097 NAIPQ13075 1403 aa26.71■■□□□ 1.87
GTF3C5-202ENST00000372097 CDK11AQ9UQ88 783 aaPredicted RBP26.7■■□□□ 1.86
GTF3C5-202ENST00000372097 IRX6P78412 446 aaPredicted RBP26.66■■□□□ 1.86
GTF3C5-202ENST00000372097 WASHC2AQ641Q2 1341 aa26.65■■□□□ 1.86
GTF3C5-202ENST00000372097 ERICH6BQ5W0A0 696 aa26.65■■□□□ 1.86
GTF3C5-202ENST00000372097 ADAMTS12P58397 1594 aa26.65■■□□□ 1.86
GTF3C5-202ENST00000372097 NCOA2Q15596 1464 aa26.65■■□□□ 1.86
GTF3C5-202ENST00000372097 ZNF608Q9ULD9 1512 aaPredicted RBP26.63■■□□□ 1.85
GTF3C5-202ENST00000372097 IQGAP2Q13576 1575 aa26.62■■□□□ 1.85
GTF3C5-202ENST00000372097 THOC2Q8NI27 1593 aaKnown RBP26.61■■□□□ 1.85
GTF3C5-202ENST00000372097 MYOM3Q5VTT5 1437 aa26.6■■□□□ 1.85
GTF3C5-202ENST00000372097 HSPA5P11021 654 aaKnown RBP26.6■■□□□ 1.85
GTF3C5-202ENST00000372097 SUPT6HQ7KZ85 1726 aaKnown RBP26.58■■□□□ 1.85
GTF3C5-202ENST00000372097 EHBP1L1Q8N3D4 1523 aa26.57■■□□□ 1.84
GTF3C5-202ENST00000372097 MAGI3Q5TCQ9 1506 aa26.56■■□□□ 1.84
GTF3C5-202ENST00000372097 IFT140Q96RY7 1462 aa26.56■■□□□ 1.84
GTF3C5-202ENST00000372097 PPP4R2Q9NY27 417 aa26.55■■□□□ 1.84
GTF3C5-202ENST00000372097 ARID3CA6NKF2 412 aa26.54■■□□□ 1.84
GTF3C5-202ENST00000372097 WDR62O43379 1518 aa26.52■■□□□ 1.84
GTF3C5-202ENST00000372097 CCDC184Q52MB2 194 aa26.51■■□□□ 1.83
GTF3C5-202ENST00000372097 EIF4G2P78344 907 aaKnown RBP eCLIP26.5■■□□□ 1.83
GTF3C5-202ENST00000372097 CNTLNQ9NXG0 1405 aa26.5■■□□□ 1.83
GTF3C5-202ENST00000372097 HECW1Q76N89 1606 aa26.5■■□□□ 1.83
GTF3C5-202ENST00000372097 DENND4BO75064 1496 aaPredicted RBP26.5■■□□□ 1.83
GTF3C5-202ENST00000372097 UGGT2Q9NYU1 1516 aa26.5■■□□□ 1.83
GTF3C5-202ENST00000372097 ERICH6Q7L0X2 663 aa26.49■■□□□ 1.83
GTF3C5-202ENST00000372097 EPRSP07814 1512 aaKnown RBP26.48■■□□□ 1.83
GTF3C5-202ENST00000372097 CDK13Q14004 1512 aaKnown RBP26.46■■□□□ 1.83
GTF3C5-202ENST00000372097 ARHGEF11O15085 1522 aa26.45■■□□□ 1.83
GTF3C5-202ENST00000372097 PRKRIP1Q9H875 184 aaPredicted RBP26.44■■□□□ 1.82
GTF3C5-202ENST00000372097 RRP7BPQ9NSQ0 103 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms