RNA–Protein interactions for RNA: ENST00000372057.1

AMMECR1-202, Transcript of Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AMMECR1, Length 3,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMMECR1-202ENST00000372057 CFAP43Q8NDM7 1665 aa15.25■□□□□ 0.03
AMMECR1-202ENST00000372057 TIAM1Q13009 1591 aa15.25■□□□□ 0.03
AMMECR1-202ENST00000372057 LAMC3Q9Y6N6 1575 aa15.23■□□□□ 0.03
AMMECR1-202ENST00000372057 CARMIL1Q5VZK9 1371 aa15.21■□□□□ 0.03
AMMECR1-202ENST00000372057 DIEXFQ68CQ4 756 aaKnown RBP15.21■□□□□ 0.03
AMMECR1-202ENST00000372057 UBE2Q2Q8WVN8 375 aa15.21■□□□□ 0.02
AMMECR1-202ENST00000372057 EFCAB5A4FU69 1503 aa15.2■□□□□ 0.02
AMMECR1-202ENST00000372057 TOPBP1Q92547 1522 aa15.2■□□□□ 0.02
AMMECR1-202ENST00000372057 ZNF316A6NFI3 1004 aaPredicted RBP15.2■□□□□ 0.02
AMMECR1-202ENST00000372057 AQRO60306 1485 aaKnown RBP eCLIP15.18■□□□□ 0.02
AMMECR1-202ENST00000372057 CTTNBP2Q8WZ74 1663 aa15.18■□□□□ 0.02
AMMECR1-202ENST00000372057 DHX57Q6P158 1386 aaKnown RBP15.18■□□□□ 0.02
AMMECR1-202ENST00000372057 POLA1P09884 1462 aaPredicted RBP15.17■□□□□ 0.02
AMMECR1-202ENST00000372057 KANK4Q5T7N3 995 aaPredicted RBP15.17■□□□□ 0.02
AMMECR1-202ENST00000372057 FHAD1B1AJZ9 1412 aa15.15■□□□□ 0.02
AMMECR1-202ENST00000372057 ABCA5Q8WWZ7 1642 aa15.15■□□□□ 0.02
AMMECR1-202ENST00000372057 CCNB3Q8WWL7 1395 aa15.14■□□□□ 0.01
AMMECR1-202ENST00000372057 LRRC9Q6ZRR7 1453 aa15.14■□□□□ 0.01
AMMECR1-202ENST00000372057 TSHZ2Q9NRE2 1034 aa15.14■□□□□ 0.01
AMMECR1-202ENST00000372057 HNRNPUL2Q1KMD3 747 aaKnown RBP15.13■□□□□ 0.01
AMMECR1-202ENST00000372057 FYCO1Q9BQS8 1478 aa15.11■□□□□ 0.01
AMMECR1-202ENST00000372057 PCF11O94913 1555 aaKnown RBP15.11■□□□□ 0.01
AMMECR1-202ENST00000372057 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.1■□□□□ 0.01
AMMECR1-202ENST00000372057 SAMD9Q5K651 1589 aa15.09■□□□□ 0.01
AMMECR1-202ENST00000372057 SALL2Q9Y467 1007 aaPredicted RBP15.09■□□□□ 0.01
AMMECR1-202ENST00000372057 URB2Q14146 1524 aaKnown RBP15.08■□□□□ 0
AMMECR1-202ENST00000372057 CCDC136Q96JN2 1154 aa15.07■□□□□ 0
AMMECR1-202ENST00000372057 CASKIN1Q8WXD9 1431 aa15.07■□□□□ 0
AMMECR1-202ENST00000372057 RAD54L2Q9Y4B4 1467 aa15.06■□□□□ 0
AMMECR1-202ENST00000372057 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
AMMECR1-202ENST00000372057 THOC2Q8NI27 1593 aaKnown RBP15.05■□□□□ -0
AMMECR1-202ENST00000372057 NESP48681 1621 aa15.04■□□□□ -0
AMMECR1-202ENST00000372057 SNAPC4Q5SXM2 1469 aa15.02■□□□□ -0
AMMECR1-202ENST00000372057 MAPKBP1O60336 1514 aa15.02■□□□□ -0
AMMECR1-202ENST00000372057 TARBP1Q13395 1621 aaKnown RBP15.02□□□□□ -0.01
AMMECR1-202ENST00000372057 PHLDB1Q86UU1 1377 aa14.99□□□□□ -0.01
AMMECR1-202ENST00000372057 PDS5BQ9NTI5 1447 aa14.98□□□□□ -0.01
AMMECR1-202ENST00000372057 RANGAP1P46060 587 aaPredicted RBP14.98□□□□□ -0.01
AMMECR1-202ENST00000372057 LRRIQ1Q96JM4 1722 aa14.98□□□□□ -0.01
AMMECR1-202ENST00000372057 FMN1Q68DA7 1419 aa14.98□□□□□ -0.01
AMMECR1-202ENST00000372057 YTHDC1Q96MU7 727 aaKnown RBP14.97□□□□□ -0.01
AMMECR1-202ENST00000372057 SETD5Q9C0A6 1442 aa14.95□□□□□ -0.02
AMMECR1-202ENST00000372057 RAB3GAP2Q9H2M9 1393 aa14.94□□□□□ -0.02
AMMECR1-202ENST00000372057 GAPVD1Q14C86 1478 aa14.94□□□□□ -0.02
AMMECR1-202ENST00000372057 GRIN2BQ13224 1484 aa14.94□□□□□ -0.02
AMMECR1-202ENST00000372057 ARHGEF11O15085 1522 aa14.92□□□□□ -0.02
AMMECR1-202ENST00000372057 FHOD3Q2V2M9 1422 aa14.92□□□□□ -0.02
AMMECR1-202ENST00000372057 PBRM1Q86U86 1689 aa14.92□□□□□ -0.02
AMMECR1-202ENST00000372057 TIMELESSQ9UNS1 1208 aa14.88□□□□□ -0.03
AMMECR1-202ENST00000372057 PKNOX2Q96KN3 472 aa14.88□□□□□ -0.03
AMMECR1-202ENST00000372057 MIER1Q8N108 512 aa14.87□□□□□ -0.03
AMMECR1-202ENST00000372057 EHBP1L1Q8N3D4 1523 aa14.86□□□□□ -0.03
AMMECR1-202ENST00000372057 PODXL2Q9NZ53 605 aa14.86□□□□□ -0.03
AMMECR1-202ENST00000372057 SUPT16HQ9Y5B9 1047 aaKnown RBP14.86□□□□□ -0.03
AMMECR1-202ENST00000372057 FGD6Q6ZV73 1430 aa14.86□□□□□ -0.03
AMMECR1-202ENST00000372057 ADAMTS12P58397 1594 aa14.86□□□□□ -0.03
AMMECR1-202ENST00000372057 SUPT6HQ7KZ85 1726 aaKnown RBP14.85□□□□□ -0.03
AMMECR1-202ENST00000372057 CCDC18Q5T9S5 1454 aa14.83□□□□□ -0.04
AMMECR1-202ENST00000372057 UGGT2Q9NYU1 1516 aa14.83□□□□□ -0.04
AMMECR1-202ENST00000372057 TCOF1Q13428 1488 aaKnown RBP14.82□□□□□ -0.04
AMMECR1-202ENST00000372057 HFM1A2PYH4 1435 aa14.82□□□□□ -0.04
AMMECR1-202ENST00000372057 HECW1Q76N89 1606 aa14.8□□□□□ -0.04
AMMECR1-202ENST00000372057 PTPN23Q9H3S7 1636 aa14.8□□□□□ -0.04
AMMECR1-202ENST00000372057 IQGAP2Q13576 1575 aa14.8□□□□□ -0.04
AMMECR1-202ENST00000372057 MRC2Q9UBG0 1479 aa14.79□□□□□ -0.04
AMMECR1-202ENST00000372057 TDRD9Q8NDG6 1382 aaKnown RBP14.79□□□□□ -0.04
AMMECR1-202ENST00000372057 MYOM3Q5VTT5 1437 aa14.78□□□□□ -0.04
AMMECR1-202ENST00000372057 AKNAQ7Z591 1439 aa14.78□□□□□ -0.04
AMMECR1-202ENST00000372057 NCOA2Q15596 1464 aa14.78□□□□□ -0.04
AMMECR1-202ENST00000372057 WDR62O43379 1518 aa14.78□□□□□ -0.04
AMMECR1-202ENST00000372057 GCC2Q8IWJ2 1684 aa14.78□□□□□ -0.04
AMMECR1-202ENST00000372057 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.77□□□□□ -0.05
AMMECR1-202ENST00000372057 MAGI3Q5TCQ9 1506 aa14.76□□□□□ -0.05
AMMECR1-202ENST00000372057 UACAQ9BZF9 1416 aa14.74□□□□□ -0.05
AMMECR1-202ENST00000372057 PTPRKQ15262 1439 aa14.74□□□□□ -0.05
AMMECR1-202ENST00000372057 MSH5O43196 834 aa14.74□□□□□ -0.05
AMMECR1-202ENST00000372057 IFT140Q96RY7 1462 aa14.73□□□□□ -0.05
AMMECR1-202ENST00000372057 NAIPQ13075 1403 aa14.72□□□□□ -0.05
AMMECR1-202ENST00000372057 MTUS2Q5JR59 1369 aa14.71□□□□□ -0.06
AMMECR1-202ENST00000372057 MIA2Q96PC5 1412 aa14.7□□□□□ -0.06
AMMECR1-202ENST00000372057 EPRSP07814 1512 aaKnown RBP14.7□□□□□ -0.06
AMMECR1-202ENST00000372057 P3H3Q8IVL6 736 aa14.7□□□□□ -0.06
AMMECR1-202ENST00000372057 KDM5BQ9UGL1 1544 aa14.69□□□□□ -0.06
AMMECR1-202ENST00000372057 DEKP35659 375 aaKnown RBP14.69□□□□□ -0.06
AMMECR1-202ENST00000372057 KIAA0556O60303 1618 aa14.67□□□□□ -0.06
AMMECR1-202ENST00000372057 FAM50AQ14320 339 aaKnown RBP14.67□□□□□ -0.06
AMMECR1-202ENST00000372057 KIAA0586Q9BVV6 1533 aa14.66□□□□□ -0.06
AMMECR1-202ENST00000372057 ITGAEP38570 1179 aa14.64□□□□□ -0.07
AMMECR1-202ENST00000372057 DISP1Q96F81 1524 aa14.64□□□□□ -0.07
AMMECR1-202ENST00000372057 PPP1R15AO75807 674 aaPredicted RBP14.64□□□□□ -0.07
AMMECR1-202ENST00000372057 RBM19Q9Y4C8 960 aaKnown RBP14.63□□□□□ -0.07
AMMECR1-202ENST00000372057 ERICH6BQ5W0A0 696 aa14.62□□□□□ -0.07
AMMECR1-202ENST00000372057 DENND4BO75064 1496 aaPredicted RBP14.62□□□□□ -0.07
AMMECR1-202ENST00000372057 EIF4G3O43432 1585 aaKnown RBP14.61□□□□□ -0.07
AMMECR1-202ENST00000372057 ADCY10Q96PN6 1610 aa14.6□□□□□ -0.07
AMMECR1-202ENST00000372057 DNMT1P26358 1616 aaKnown RBP14.6□□□□□ -0.07
AMMECR1-202ENST00000372057 RAPGEF6Q8TEU7 1601 aa14.59□□□□□ -0.07
AMMECR1-202ENST00000372057 ROCK1Q13464 1354 aa14.59□□□□□ -0.07
AMMECR1-202ENST00000372057 GRIN2AQ12879 1464 aa14.58□□□□□ -0.07
AMMECR1-202ENST00000372057 MAGI1Q96QZ7 1491 aaPredicted RBP14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms