RNA–Protein interactions for RNA: ENST00000372057.1

AMMECR1-202, Transcript of Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AMMECR1, Length 3,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMMECR1-202ENST00000372057 NISCHQ9Y2I1 1504 aa21.72■■□□□ 1.07
AMMECR1-202ENST00000372057 CCDC180Q9P1Z9 1646 aa18.74■□□□□ 0.59
AMMECR1-202ENST00000372057 ZCCHC6Q5VYS8 1495 aaKnown RBP18.42■□□□□ 0.54
AMMECR1-202ENST00000372057 DCAF1Q9Y4B6 1507 aa18.1■□□□□ 0.49
AMMECR1-202ENST00000372057 PELP1Q8IZL8 1130 aaKnown RBP17.92■□□□□ 0.46
AMMECR1-202ENST00000372057 SHROOM4Q9ULL8 1493 aa17.85■□□□□ 0.45
AMMECR1-202ENST00000372057 MYO15BQ96JP2 1530 aa17.66■□□□□ 0.42
AMMECR1-202ENST00000372057 MYT1Q01538 1121 aa17.48■□□□□ 0.39
AMMECR1-202ENST00000372057 SUPT5HO00267 1087 aaKnown RBP17.46■□□□□ 0.39
AMMECR1-202ENST00000372057 ABCC9O60706 1549 aa17.38■□□□□ 0.37
AMMECR1-202ENST00000372057 CHIC1Q5VXU3 224 aa17.26■□□□□ 0.35
AMMECR1-202ENST00000372057 DCAF8L2P0C7V8 631 aa17.25■□□□□ 0.35
AMMECR1-202ENST00000372057 NACADO15069 1562 aa17.22■□□□□ 0.35
AMMECR1-202ENST00000372057 SCRIBQ14160 1630 aa17.12■□□□□ 0.33
AMMECR1-202ENST00000372057 RSF1Q96T23 1441 aaPredicted RBP17.07■□□□□ 0.32
AMMECR1-202ENST00000372057 HRCP23327 699 aa17.01■□□□□ 0.31
AMMECR1-202ENST00000372057 RB1CC1Q8TDY2 1594 aa16.99■□□□□ 0.31
AMMECR1-202ENST00000372057 PRKCSHP14314 528 aaPredicted RBP16.88■□□□□ 0.29
AMMECR1-202ENST00000372057 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
AMMECR1-202ENST00000372057 TTBK1Q5TCY1 1321 aaPredicted RBP16.78■□□□□ 0.28
AMMECR1-202ENST00000372057 MROH2BQ7Z745 1585 aa16.77■□□□□ 0.27
AMMECR1-202ENST00000372057 PPARGC1BQ86YN6 1023 aaKnown RBP16.77■□□□□ 0.27
AMMECR1-202ENST00000372057 CECR2Q9BXF3 1484 aa16.75■□□□□ 0.27
AMMECR1-202ENST00000372057 BAZ1AQ9NRL2 1556 aaPredicted RBP16.74■□□□□ 0.27
AMMECR1-202ENST00000372057 EIF4G1Q04637 1599 aaKnown RBP16.69■□□□□ 0.26
AMMECR1-202ENST00000372057 UNC13AQ9UPW8 1703 aa16.68■□□□□ 0.26
AMMECR1-202ENST00000372057 WIZO95785 1651 aa16.67■□□□□ 0.26
AMMECR1-202ENST00000372057 SMARCA4P51532 1647 aa16.57■□□□□ 0.24
AMMECR1-202ENST00000372057 TOP2AP11388 1531 aaKnown RBP16.56■□□□□ 0.24
AMMECR1-202ENST00000372057 BCL11AQ9H165 835 aa16.52■□□□□ 0.24
AMMECR1-202ENST00000372057 LOC105371045A0A1W2PR82 267 aa16.51■□□□□ 0.23
AMMECR1-202ENST00000372057 PEG3Q9GZU2 1588 aa16.46■□□□□ 0.23
AMMECR1-202ENST00000372057 TRIM41Q8WV44 630 aa16.45■□□□□ 0.22
AMMECR1-202ENST00000372057 BICRAQ9NZM4 1560 aa16.43■□□□□ 0.22
AMMECR1-202ENST00000372057 FAM9AQ8IZU1 332 aaPredicted RBP16.43■□□□□ 0.22
AMMECR1-202ENST00000372057 SMARCA2P51531 1590 aa16.42■□□□□ 0.22
AMMECR1-202ENST00000372057 PCGF6Q9BYE7 350 aa16.4■□□□□ 0.22
AMMECR1-202ENST00000372057 TRIM26Q12899 539 aaPredicted RBP16.37■□□□□ 0.21
AMMECR1-202ENST00000372057 CCDC88BA6NC98 1476 aa16.34■□□□□ 0.21
AMMECR1-202ENST00000372057 APLP2Q06481 763 aa16.28■□□□□ 0.2
AMMECR1-202ENST00000372057 EEA1Q15075 1411 aa16.17■□□□□ 0.18
AMMECR1-202ENST00000372057 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
AMMECR1-202ENST00000372057 WRNQ14191 1432 aaPredicted RBP eCLIP16.13■□□□□ 0.17
AMMECR1-202ENST00000372057 ERICH6Q7L0X2 663 aa16.13■□□□□ 0.17
AMMECR1-202ENST00000372057 ATAD2BQ9ULI0 1458 aa16.09■□□□□ 0.17
AMMECR1-202ENST00000372057 ZEB1P37275 1124 aaPredicted RBP16.06■□□□□ 0.16
AMMECR1-202ENST00000372057 TNIKQ9UKE5 1360 aa16.02■□□□□ 0.16
AMMECR1-202ENST00000372057 KIF21BO75037 1637 aa15.99■□□□□ 0.15
AMMECR1-202ENST00000372057 SOGA1O94964 1423 aa15.98■□□□□ 0.15
AMMECR1-202ENST00000372057 BAZ1BQ9UIG0 1483 aaKnown RBP15.97■□□□□ 0.15
AMMECR1-202ENST00000372057 SYNJ1O43426 1573 aa15.97■□□□□ 0.15
AMMECR1-202ENST00000372057 HMGXB3Q12766 1538 aa15.96■□□□□ 0.14
AMMECR1-202ENST00000372057 ACIN1Q9UKV3 1341 aaKnown RBP15.94■□□□□ 0.14
AMMECR1-202ENST00000372057 CEP162Q5TB80 1403 aa15.93■□□□□ 0.14
AMMECR1-202ENST00000372057 NEUROD1Q13562 356 aa15.93■□□□□ 0.14
AMMECR1-202ENST00000372057 GOLGA3Q08378 1498 aa15.92■□□□□ 0.14
AMMECR1-202ENST00000372057 PABPN1Q86U42 306 aaKnown RBP eCLIP15.92■□□□□ 0.14
AMMECR1-202ENST00000372057 BIVM-ERCC5R4GMW8 1640 aa15.91■□□□□ 0.14
AMMECR1-202ENST00000372057 GTF3C3Q9Y5Q9 886 aa15.91■□□□□ 0.14
AMMECR1-202ENST00000372057 TOP2BQ02880 1626 aa15.9■□□□□ 0.14
AMMECR1-202ENST00000372057 CENPBP07199 599 aaPredicted RBP15.9■□□□□ 0.14
AMMECR1-202ENST00000372057 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
AMMECR1-202ENST00000372057 NCAPD3P42695 1498 aa15.88■□□□□ 0.13
AMMECR1-202ENST00000372057 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
AMMECR1-202ENST00000372057 CEP164Q9UPV0 1460 aa15.86■□□□□ 0.13
AMMECR1-202ENST00000372057 SLC24A1O60721 1099 aa15.83■□□□□ 0.12
AMMECR1-202ENST00000372057 PRDM2Q13029 1718 aa15.79■□□□□ 0.12
AMMECR1-202ENST00000372057 ERICH3Q5RHP9 1530 aa15.76■□□□□ 0.11
AMMECR1-202ENST00000372057 CFTRP13569 1480 aa15.7■□□□□ 0.1
AMMECR1-202ENST00000372057 PRXQ9BXM0 1461 aa15.68■□□□□ 0.1
AMMECR1-202ENST00000372057 ANP32EQ9BTT0 268 aa15.66■□□□□ 0.1
AMMECR1-202ENST00000372057 EHMT2Q96KQ7 1210 aa15.66■□□□□ 0.1
AMMECR1-202ENST00000372057 VPS8Q8N3P4 1428 aa15.66■□□□□ 0.1
AMMECR1-202ENST00000372057 RAPGEF2Q9Y4G8 1499 aa15.65■□□□□ 0.1
AMMECR1-202ENST00000372057 CUX1P39880 1505 aa15.65■□□□□ 0.1
AMMECR1-202ENST00000372057 DNAJC5BQ9UF47 199 aa15.64■□□□□ 0.09
AMMECR1-202ENST00000372057 CLIP1P30622 1438 aa15.63■□□□□ 0.09
AMMECR1-202ENST00000372057 UBTFP17480 764 aaKnown RBP15.58■□□□□ 0.08
AMMECR1-202ENST00000372057 KIF27Q86VH2 1401 aa15.5■□□□□ 0.07
AMMECR1-202ENST00000372057 ARAP1Q96P48 1450 aa15.5■□□□□ 0.07
AMMECR1-202ENST00000372057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
AMMECR1-202ENST00000372057 CCER1Q8TC90 406 aaPredicted RBP15.47■□□□□ 0.07
AMMECR1-202ENST00000372057 ANO8Q9HCE9 1232 aaPredicted RBP15.44■□□□□ 0.06
AMMECR1-202ENST00000372057 CADPSQ9ULU8 1353 aa15.43■□□□□ 0.06
AMMECR1-202ENST00000372057 MAP3K1Q13233 1512 aa15.42■□□□□ 0.06
AMMECR1-202ENST00000372057 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
AMMECR1-202ENST00000372057 CUX2O14529 1486 aa15.38■□□□□ 0.05
AMMECR1-202ENST00000372057 RRBP1Q9P2E9 1410 aaKnown RBP15.37■□□□□ 0.05
AMMECR1-202ENST00000372057 ARHGAP35Q9NRY4 1499 aa15.36■□□□□ 0.05
AMMECR1-202ENST00000372057 IGF1RP08069 1367 aa15.34■□□□□ 0.05
AMMECR1-202ENST00000372057 CLSPNQ9HAW4 1339 aa15.33■□□□□ 0.05
AMMECR1-202ENST00000372057 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
AMMECR1-202ENST00000372057 FGD5Q6ZNL6 1462 aa15.32■□□□□ 0.04
AMMECR1-202ENST00000372057 EIF5BO60841 1220 aaKnown RBP15.3■□□□□ 0.04
AMMECR1-202ENST00000372057 ABCA10Q8WWZ4 1543 aa15.28■□□□□ 0.04
AMMECR1-202ENST00000372057 WDR97A6NE52 1622 aa15.27■□□□□ 0.04
AMMECR1-202ENST00000372057 DAXXQ9UER7 740 aaPredicted RBP15.27■□□□□ 0.03
AMMECR1-202ENST00000372057 PLEKHG5O94827 1062 aa15.26■□□□□ 0.03
AMMECR1-202ENST00000372057 FANCD2Q9BXW9 1451 aa15.26■□□□□ 0.03
AMMECR1-202ENST00000372057 CUL7Q14999 1698 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms