RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 CTTNBP2Q8WZ74 1663 aa28.62■■■□□ 2.17
VPS37B-202ENST00000371248 OSCARQ8IYS5 282 aa28.62■■■□□ 2.17
VPS37B-202ENST00000371248 KIAA0586Q9BVV6 1533 aa28.55■■■□□ 2.16
VPS37B-202ENST00000371248 TNIKQ9UKE5 1360 aa28.53■■■□□ 2.16
VPS37B-202ENST00000371248 IQGAP2Q13576 1575 aa28.51■■■□□ 2.15
VPS37B-202ENST00000371248 CLASP1Q7Z460 1538 aa28.5■■■□□ 2.15
VPS37B-202ENST00000371248 RANGAP1P46060 587 aaPredicted RBP28.46■■■□□ 2.15
VPS37B-202ENST00000371248 JPH4Q96JJ6 628 aa28.42■■■□□ 2.14
VPS37B-202ENST00000371248 SHROOM2Q13796 1616 aa28.37■■■□□ 2.13
VPS37B-202ENST00000371248 UGGT2Q9NYU1 1516 aa28.35■■■□□ 2.13
VPS37B-202ENST00000371248 CEP162Q5TB80 1403 aa28.31■■■□□ 2.12
VPS37B-202ENST00000371248 PRG4Q92954 1404 aaPredicted RBP28.3■■■□□ 2.12
VPS37B-202ENST00000371248 CLIP1P30622 1438 aa28.28■■■□□ 2.12
VPS37B-202ENST00000371248 DISP1Q96F81 1524 aa28.26■■■□□ 2.11
VPS37B-202ENST00000371248 SAMD9Q5K651 1589 aa28.25■■■□□ 2.11
VPS37B-202ENST00000371248 P3H3Q8IVL6 736 aa28.25■■■□□ 2.11
VPS37B-202ENST00000371248 CARMIL2Q6F5E8 1435 aa28.24■■■□□ 2.11
VPS37B-202ENST00000371248 ARHGAP35Q9NRY4 1499 aa28.23■■■□□ 2.11
VPS37B-202ENST00000371248 EFCAB5A4FU69 1503 aa28.23■■■□□ 2.11
VPS37B-202ENST00000371248 ERCC6L2Q5T890 1561 aa28.23■■■□□ 2.11
VPS37B-202ENST00000371248 KIAA0556O60303 1618 aa28.23■■■□□ 2.11
VPS37B-202ENST00000371248 FHOD3Q2V2M9 1422 aa28.15■■■□□ 2.1
VPS37B-202ENST00000371248 ARHGEF11O15085 1522 aa28.14■■■□□ 2.09
VPS37B-202ENST00000371248 TTBK1Q5TCY1 1321 aaPredicted RBP28.13■■■□□ 2.09
VPS37B-202ENST00000371248 ARAP1Q96P48 1450 aa28.11■■■□□ 2.09
VPS37B-202ENST00000371248 RIMBP3CA6NJZ7 1639 aa28.08■■■□□ 2.09
VPS37B-202ENST00000371248 RIMBP3BA6NNM3 1639 aa28.08■■■□□ 2.09
VPS37B-202ENST00000371248 RIMBP3Q9UFD9 1639 aa28.08■■■□□ 2.09
VPS37B-202ENST00000371248 PTPRGP23470 1445 aa28.04■■■□□ 2.08
VPS37B-202ENST00000371248 DNAJC5Q9H3Z4 198 aa28.02■■■□□ 2.08
VPS37B-202ENST00000371248 FMN1Q68DA7 1419 aa27.98■■■□□ 2.07
VPS37B-202ENST00000371248 VPS8Q8N3P4 1428 aa27.91■■■□□ 2.06
VPS37B-202ENST00000371248 PLB1Q6P1J6 1458 aa27.91■■■□□ 2.06
VPS37B-202ENST00000371248 CYB5RLQ6IPT4 315 aa27.9■■■□□ 2.06
VPS37B-202ENST00000371248 RAPGEF6Q8TEU7 1601 aa27.87■■■□□ 2.05
VPS37B-202ENST00000371248 ABCA8O94911 1581 aa27.87■■■□□ 2.05
VPS37B-202ENST00000371248 UACAQ9BZF9 1416 aa27.86■■■□□ 2.05
VPS37B-202ENST00000371248 ATP1B4Q9UN42 357 aaPredicted RBP27.86■■■□□ 2.05
VPS37B-202ENST00000371248 PCF11O94913 1555 aaKnown RBP27.86■■■□□ 2.05
VPS37B-202ENST00000371248 CASKIN1Q8WXD9 1431 aa27.83■■■□□ 2.05
VPS37B-202ENST00000371248 FYCO1Q9BQS8 1478 aa27.79■■■□□ 2.04
VPS37B-202ENST00000371248 ABCC2Q92887 1545 aa27.79■■■□□ 2.04
VPS37B-202ENST00000371248 HECW1Q76N89 1606 aa27.78■■■□□ 2.04
VPS37B-202ENST00000371248 ADCY10Q96PN6 1610 aa27.78■■■□□ 2.04
VPS37B-202ENST00000371248 UHRF1BP1LA0JNW5 1464 aa27.77■■■□□ 2.04
VPS37B-202ENST00000371248 NUP153P49790 1475 aaKnown RBP27.76■■■□□ 2.03
VPS37B-202ENST00000371248 ARID3CA6NKF2 412 aa27.76■■■□□ 2.03
VPS37B-202ENST00000371248 LRRIQ1Q96JM4 1722 aa27.74■■■□□ 2.03
VPS37B-202ENST00000371248 EPRSP07814 1512 aaKnown RBP27.69■■■□□ 2.02
VPS37B-202ENST00000371248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.67■■■□□ 2.02
VPS37B-202ENST00000371248 HNRNPUL2Q1KMD3 747 aaKnown RBP27.67■■■□□ 2.02
VPS37B-202ENST00000371248 ATP10BO94823 1461 aa27.66■■■□□ 2.02
VPS37B-202ENST00000371248 CDK13Q14004 1512 aaKnown RBP27.66■■■□□ 2.02
VPS37B-202ENST00000371248 KDM5BQ9UGL1 1544 aa27.65■■■□□ 2.02
VPS37B-202ENST00000371248 CCDC18Q5T9S5 1454 aa27.65■■■□□ 2.02
VPS37B-202ENST00000371248 APLP2Q06481 763 aa27.64■■■□□ 2.02
VPS37B-202ENST00000371248 ZCCHC11Q5TAX3 1644 aaKnown RBP27.64■■■□□ 2.02
VPS37B-202ENST00000371248 NPM1P06748 294 aaKnown RBP eCLIP27.64■■■□□ 2.01
VPS37B-202ENST00000371248 TIAM1Q13009 1591 aa27.59■■■□□ 2.01
VPS37B-202ENST00000371248 CFAP43Q8NDM7 1665 aa27.58■■■□□ 2.01
VPS37B-202ENST00000371248 MAP3K1Q13233 1512 aa27.55■■■□□ 2
VPS37B-202ENST00000371248 CDK11AQ9UQ88 783 aaPredicted RBP27.53■■■□□ 2
VPS37B-202ENST00000371248 PLEKHD1A6NEE1 506 aa27.5■■□□□ 1.99
VPS37B-202ENST00000371248 KANK4Q5T7N3 995 aaPredicted RBP27.49■■□□□ 1.99
VPS37B-202ENST00000371248 MAGI3Q5TCQ9 1506 aa27.48■■□□□ 1.99
VPS37B-202ENST00000371248 PPARGC1BQ86YN6 1023 aaKnown RBP27.47■■□□□ 1.99
VPS37B-202ENST00000371248 ASXL2Q76L83 1435 aa27.46■■□□□ 1.99
VPS37B-202ENST00000371248 MTUS2Q5JR59 1369 aa27.46■■□□□ 1.99
VPS37B-202ENST00000371248 LRRC9Q6ZRR7 1453 aa27.45■■□□□ 1.99
VPS37B-202ENST00000371248 MAPKBP1O60336 1514 aa27.44■■□□□ 1.98
VPS37B-202ENST00000371248 TROQ12816 1431 aaPredicted RBP27.42■■□□□ 1.98
VPS37B-202ENST00000371248 WDR7Q9Y4E6 1490 aa27.41■■□□□ 1.98
VPS37B-202ENST00000371248 KCNH8Q96L42 1107 aa27.4■■□□□ 1.98
VPS37B-202ENST00000371248 EHBP1L1Q8N3D4 1523 aa27.4■■□□□ 1.98
VPS37B-202ENST00000371248 KIF14Q15058 1648 aa27.34■■□□□ 1.97
VPS37B-202ENST00000371248 SUPT6HQ7KZ85 1726 aaKnown RBP27.33■■□□□ 1.97
VPS37B-202ENST00000371248 NCOA2Q15596 1464 aa27.27■■□□□ 1.96
VPS37B-202ENST00000371248 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.25■■□□□ 1.95
VPS37B-202ENST00000371248 ABCC10Q5T3U5 1492 aa27.24■■□□□ 1.95
VPS37B-202ENST00000371248 DIP2BQ9P265 1576 aa27.23■■□□□ 1.95
VPS37B-202ENST00000371248 TTC37Q6PGP7 1564 aa27.22■■□□□ 1.95
VPS37B-202ENST00000371248 FAM69CQ0P6D2 419 aa27.21■■□□□ 1.95
VPS37B-202ENST00000371248 ABCA9Q8IUA7 1624 aa27.21■■□□□ 1.95
VPS37B-202ENST00000371248 KIF13AQ9H1H9 1805 aa27.19■■□□□ 1.94
VPS37B-202ENST00000371248 GLI2P10070 1586 aa27.18■■□□□ 1.94
VPS37B-202ENST00000371248 CCNB3Q8WWL7 1395 aa27.18■■□□□ 1.94
VPS37B-202ENST00000371248 PHLDB1Q86UU1 1377 aa27.16■■□□□ 1.94
VPS37B-202ENST00000371248 CDC42BPAQ5VT25 1732 aa27.15■■□□□ 1.94
VPS37B-202ENST00000371248 MYO5CQ9NQX4 1742 aa27.15■■□□□ 1.94
VPS37B-202ENST00000371248 GPATCH8Q9UKJ3 1502 aaKnown RBP27.12■■□□□ 1.93
VPS37B-202ENST00000371248 TRHP20396 242 aaPredicted RBP27.12■■□□□ 1.93
VPS37B-202ENST00000371248 CD109Q6YHK3 1445 aa27.12■■□□□ 1.93
VPS37B-202ENST00000371248 MAP3K4Q9Y6R4 1608 aa27.11■■□□□ 1.93
VPS37B-202ENST00000371248 ITSN2Q9NZM3 1697 aa27.11■■□□□ 1.93
VPS37B-202ENST00000371248 MYOM3Q5VTT5 1437 aa27.1■■□□□ 1.93
VPS37B-202ENST00000371248 CDC42BPBQ9Y5S2 1711 aa27.1■■□□□ 1.93
VPS37B-202ENST00000371248 PREX2Q70Z35 1606 aa27.09■■□□□ 1.93
VPS37B-202ENST00000371248 PLCH2O75038 1416 aa27.08■■□□□ 1.93
VPS37B-202ENST00000371248 TSPOAP1O95153 1857 aa27.08■■□□□ 1.93
VPS37B-202ENST00000371248 CFDP1Q9UEE9 299 aaPredicted RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms