RNA–Protein interactions for RNA: ENST00000370332.5

GFI1-202, Transcript of growth factor independent 1 transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GFI1, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1-202ENST00000370332 CARMIL1Q5VZK9 1371 aa29.05■■■□□ 2.24
GFI1-202ENST00000370332 DDX10Q13206 875 aaKnown RBP29.05■■■□□ 2.24
GFI1-202ENST00000370332 ATP1B4Q9UN42 357 aaPredicted RBP29.03■■■□□ 2.24
GFI1-202ENST00000370332 LRRC9Q6ZRR7 1453 aa29.03■■■□□ 2.24
GFI1-202ENST00000370332 TSHZ2Q9NRE2 1034 aa29.02■■■□□ 2.24
GFI1-202ENST00000370332 WDR97A6NE52 1622 aa29■■■□□ 2.23
GFI1-202ENST00000370332 MAP3K1Q13233 1512 aa28.98■■■□□ 2.23
GFI1-202ENST00000370332 BCANQ96GW7 911 aa28.95■■■□□ 2.23
GFI1-202ENST00000370332 HIRIP3Q9BW71 556 aaPredicted RBP28.95■■■□□ 2.23
GFI1-202ENST00000370332 FGD5Q6ZNL6 1462 aa28.93■■■□□ 2.22
GFI1-202ENST00000370332 CADPSQ9ULU8 1353 aa28.86■■■□□ 2.21
GFI1-202ENST00000370332 FHAD1B1AJZ9 1412 aa28.86■■■□□ 2.21
GFI1-202ENST00000370332 PRDM2Q13029 1718 aa28.86■■■□□ 2.21
GFI1-202ENST00000370332 PCF11O94913 1555 aaKnown RBP28.85■■■□□ 2.21
GFI1-202ENST00000370332 PPP1R15AO75807 674 aaPredicted RBP28.84■■■□□ 2.21
GFI1-202ENST00000370332 FKBP8Q14318 412 aa28.84■■■□□ 2.21
GFI1-202ENST00000370332 FHOD3Q2V2M9 1422 aa28.82■■■□□ 2.2
GFI1-202ENST00000370332 CFAP43Q8NDM7 1665 aa28.78■■■□□ 2.2
GFI1-202ENST00000370332 TRIM52Q96A61 297 aa28.73■■■□□ 2.19
GFI1-202ENST00000370332 TIMELESSQ9UNS1 1208 aa28.72■■■□□ 2.19
GFI1-202ENST00000370332 RAD54L2Q9Y4B4 1467 aa28.68■■■□□ 2.18
GFI1-202ENST00000370332 ANP32CO43423 234 aa28.67■■■□□ 2.18
GFI1-202ENST00000370332 FYCO1Q9BQS8 1478 aa28.64■■■□□ 2.17
GFI1-202ENST00000370332 CASKIN1Q8WXD9 1431 aa28.62■■■□□ 2.17
GFI1-202ENST00000370332 CCER2I3L3R5 266 aa28.61■■■□□ 2.17
GFI1-202ENST00000370332 FANCD2Q9BXW9 1451 aa28.61■■■□□ 2.17
GFI1-202ENST00000370332 TONSLQ96HA7 1378 aa28.6■■■□□ 2.17
GFI1-202ENST00000370332 ANP32EQ9BTT0 268 aa28.6■■■□□ 2.17
GFI1-202ENST00000370332 NEFLP07196 543 aa28.6■■■□□ 2.17
GFI1-202ENST00000370332 FGD6Q6ZV73 1430 aa28.57■■■□□ 2.16
GFI1-202ENST00000370332 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.56■■■□□ 2.16
GFI1-202ENST00000370332 PTPRKQ15262 1439 aa28.54■■■□□ 2.16
GFI1-202ENST00000370332 CCDC18Q5T9S5 1454 aa28.54■■■□□ 2.16
GFI1-202ENST00000370332 EFCAB5A4FU69 1503 aa28.53■■■□□ 2.16
GFI1-202ENST00000370332 MTUS2Q5JR59 1369 aa28.51■■■□□ 2.16
GFI1-202ENST00000370332 AQRO60306 1485 aaKnown RBP eCLIP28.51■■■□□ 2.15
GFI1-202ENST00000370332 POLA1P09884 1462 aaPredicted RBP28.51■■■□□ 2.15
GFI1-202ENST00000370332 ABCA10Q8WWZ4 1543 aa28.51■■■□□ 2.15
GFI1-202ENST00000370332 DNMBPQ6XZF7 1577 aa28.46■■■□□ 2.15
GFI1-202ENST00000370332 TOPBP1Q92547 1522 aa28.46■■■□□ 2.15
GFI1-202ENST00000370332 FMN1Q68DA7 1419 aa28.45■■■□□ 2.15
GFI1-202ENST00000370332 UACAQ9BZF9 1416 aa28.45■■■□□ 2.14
GFI1-202ENST00000370332 HFM1A2PYH4 1435 aa28.44■■■□□ 2.14
GFI1-202ENST00000370332 SNAPC4Q5SXM2 1469 aa28.43■■■□□ 2.14
GFI1-202ENST00000370332 RBM19Q9Y4C8 960 aaKnown RBP28.42■■■□□ 2.14
GFI1-202ENST00000370332 CTTNBP2Q8WZ74 1663 aa28.42■■■□□ 2.14
GFI1-202ENST00000370332 PTPN23Q9H3S7 1636 aa28.4■■■□□ 2.14
GFI1-202ENST00000370332 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
GFI1-202ENST00000370332 NESP48681 1621 aa28.39■■■□□ 2.14
GFI1-202ENST00000370332 NAIPQ13075 1403 aa28.38■■■□□ 2.13
GFI1-202ENST00000370332 CUL7Q14999 1698 aa28.38■■■□□ 2.13
GFI1-202ENST00000370332 NCOA2Q15596 1464 aa28.35■■■□□ 2.13
GFI1-202ENST00000370332 HNRNPUQ00839 825 aaKnown RBP eCLIP28.33■■■□□ 2.13
GFI1-202ENST00000370332 RRP7BPQ9NSQ0 103 aa28.33■■■□□ 2.12
GFI1-202ENST00000370332 MYOM3Q5VTT5 1437 aa28.32■■■□□ 2.12
GFI1-202ENST00000370332 CHIC2Q9UKJ5 165 aa28.32■■■□□ 2.12
GFI1-202ENST00000370332 TDRD9Q8NDG6 1382 aaKnown RBP28.31■■■□□ 2.12
GFI1-202ENST00000370332 LRRIQ1Q96JM4 1722 aa28.31■■■□□ 2.12
GFI1-202ENST00000370332 IRX6P78412 446 aaPredicted RBP28.29■■■□□ 2.12
GFI1-202ENST00000370332 KDM5BQ9UGL1 1544 aa28.29■■■□□ 2.12
GFI1-202ENST00000370332 HSPA5P11021 654 aaKnown RBP28.26■■■□□ 2.11
GFI1-202ENST00000370332 GRIN2BQ13224 1484 aa28.24■■■□□ 2.11
GFI1-202ENST00000370332 WASHC2AQ641Q2 1341 aa28.24■■■□□ 2.11
GFI1-202ENST00000370332 SAMD9Q5K651 1589 aa28.22■■■□□ 2.11
GFI1-202ENST00000370332 SUPT6HQ7KZ85 1726 aaKnown RBP28.19■■■□□ 2.1
GFI1-202ENST00000370332 URB2Q14146 1524 aaKnown RBP28.19■■■□□ 2.1
GFI1-202ENST00000370332 MAGI3Q5TCQ9 1506 aa28.16■■■□□ 2.1
GFI1-202ENST00000370332 EHBP1L1Q8N3D4 1523 aa28.16■■■□□ 2.1
GFI1-202ENST00000370332 CCDC184Q52MB2 194 aa28.14■■■□□ 2.1
GFI1-202ENST00000370332 DENND4BO75064 1496 aaPredicted RBP28.14■■■□□ 2.09
GFI1-202ENST00000370332 GAPVD1Q14C86 1478 aa28.14■■■□□ 2.09
GFI1-202ENST00000370332 UGGT2Q9NYU1 1516 aa28.13■■■□□ 2.09
GFI1-202ENST00000370332 FOXD1Q16676 465 aa28.13■■■□□ 2.09
GFI1-202ENST00000370332 EIF4G2P78344 907 aaKnown RBP eCLIP28.12■■■□□ 2.09
GFI1-202ENST00000370332 ARID3CA6NKF2 412 aa28.11■■■□□ 2.09
GFI1-202ENST00000370332 MSH5O43196 834 aa28.09■■■□□ 2.09
GFI1-202ENST00000370332 ABCA5Q8WWZ7 1642 aa28.09■■■□□ 2.09
GFI1-202ENST00000370332 KDM6BO15054 1643 aa28.08■■■□□ 2.09
GFI1-202ENST00000370332 L3MBTL2Q969R5 705 aa28.07■■■□□ 2.08
GFI1-202ENST00000370332 THOC2Q8NI27 1593 aaKnown RBP28.07■■■□□ 2.08
GFI1-202ENST00000370332 C11orf95C9JLR9 678 aaPredicted RBP28.07■■■□□ 2.08
GFI1-202ENST00000370332 MPHOSPH9Q99550 1183 aa28.06■■■□□ 2.08
GFI1-202ENST00000370332 ARHGEF11O15085 1522 aa28.06■■■□□ 2.08
GFI1-202ENST00000370332 CDK11AQ9UQ88 783 aaPredicted RBP28.02■■■□□ 2.08
GFI1-202ENST00000370332 FAM9BQ8IZU0 186 aa28.01■■■□□ 2.08
GFI1-202ENST00000370332 CNTLNQ9NXG0 1405 aa28.01■■■□□ 2.07
GFI1-202ENST00000370332 TCOF1Q13428 1488 aaKnown RBP28.01■■■□□ 2.07
GFI1-202ENST00000370332 HECW1Q76N89 1606 aa28■■■□□ 2.07
GFI1-202ENST00000370332 GCC2Q8IWJ2 1684 aa27.99■■■□□ 2.07
GFI1-202ENST00000370332 LAMC3Q9Y6N6 1575 aa27.97■■■□□ 2.07
GFI1-202ENST00000370332 PRKRIP1Q9H875 184 aaPredicted RBP27.97■■■□□ 2.07
GFI1-202ENST00000370332 CCDC7Q96M83 1385 aa27.95■■■□□ 2.06
GFI1-202ENST00000370332 CDK13Q14004 1512 aaKnown RBP27.95■■■□□ 2.06
GFI1-202ENST00000370332 NBPF8Q3BBV2 869 aa27.94■■■□□ 2.06
GFI1-202ENST00000370332 MRS2Q9HD23 443 aa27.94■■■□□ 2.06
GFI1-202ENST00000370332 EPRSP07814 1512 aaKnown RBP27.92■■■□□ 2.06
GFI1-202ENST00000370332 BCL11AQ9H165 835 aa27.91■■■□□ 2.06
GFI1-202ENST00000370332 NCOA1Q15788 1441 aa27.91■■■□□ 2.06
GFI1-202ENST00000370332 AKNAQ7Z591 1439 aa27.9■■■□□ 2.06
GFI1-202ENST00000370332 PPP4R2Q9NY27 417 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms