RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 THOC2Q8NI27 1593 aaKnown RBP25.36■■□□□ 1.65
CHTOP-203ENST00000368690 IGF1RP08069 1367 aa25.35■■□□□ 1.65
CHTOP-203ENST00000368690 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
CHTOP-203ENST00000368690 DHX57Q6P158 1386 aaKnown RBP25.34■■□□□ 1.65
CHTOP-203ENST00000368690 PRXQ9BXM0 1461 aa25.34■■□□□ 1.65
CHTOP-203ENST00000368690 TARBP1Q13395 1621 aaKnown RBP25.31■■□□□ 1.64
CHTOP-203ENST00000368690 ERICH3Q5RHP9 1530 aa25.28■■□□□ 1.64
CHTOP-203ENST00000368690 RANGAP1P46060 587 aaPredicted RBP25.27■■□□□ 1.64
CHTOP-203ENST00000368690 CARMIL1Q5VZK9 1371 aa25.27■■□□□ 1.64
CHTOP-203ENST00000368690 GAPVD1Q14C86 1478 aa25.27■■□□□ 1.64
CHTOP-203ENST00000368690 ABCA5Q8WWZ7 1642 aa25.24■■□□□ 1.63
CHTOP-203ENST00000368690 IFT140Q96RY7 1462 aa25.23■■□□□ 1.63
CHTOP-203ENST00000368690 AQRO60306 1485 aaKnown RBP eCLIP25.2■■□□□ 1.625e-9■■■■■ 42.9
CHTOP-203ENST00000368690 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
CHTOP-203ENST00000368690 TSHZ2Q9NRE2 1034 aa25.17■■□□□ 1.62
CHTOP-203ENST00000368690 RRBP1Q9P2E9 1410 aaKnown RBP25.16■■□□□ 1.62
CHTOP-203ENST00000368690 CUL7Q14999 1698 aa25.14■■□□□ 1.62
CHTOP-203ENST00000368690 ANP32EQ9BTT0 268 aa25.12■■□□□ 1.61
CHTOP-203ENST00000368690 PBRM1Q86U86 1689 aa25.11■■□□□ 1.61
CHTOP-203ENST00000368690 ARAP1Q96P48 1450 aa25.09■■□□□ 1.61
CHTOP-203ENST00000368690 EIF4G3O43432 1585 aaKnown RBP25.06■■□□□ 1.6
CHTOP-203ENST00000368690 GRIN2BQ13224 1484 aa25.05■■□□□ 1.6
CHTOP-203ENST00000368690 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.58
CHTOP-203ENST00000368690 ADAMTS12P58397 1594 aa24.94■■□□□ 1.58
CHTOP-203ENST00000368690 SNAPC4Q5SXM2 1469 aa24.94■■□□□ 1.58
CHTOP-203ENST00000368690 CCNB3Q8WWL7 1395 aa24.92■■□□□ 1.58
CHTOP-203ENST00000368690 KANK4Q5T7N3 995 aaPredicted RBP24.92■■□□□ 1.58
CHTOP-203ENST00000368690 CTTNBP2Q8WZ74 1663 aa24.88■■□□□ 1.57
CHTOP-203ENST00000368690 FBLN2P98095 1184 aa24.86■■□□□ 1.57
CHTOP-203ENST00000368690 MAPKBP1O60336 1514 aa24.84■■□□□ 1.57
CHTOP-203ENST00000368690 ARHGAP35Q9NRY4 1499 aa24.83■■□□□ 1.57
CHTOP-203ENST00000368690 MAGI1Q96QZ7 1491 aaPredicted RBP24.82■■□□□ 1.56
CHTOP-203ENST00000368690 CHMP7Q8WUX9 453 aaPredicted RBP24.82■■□□□ 1.56
CHTOP-203ENST00000368690 MAP3K1Q13233 1512 aa24.81■■□□□ 1.56
CHTOP-203ENST00000368690 P3H3Q8IVL6 736 aa24.8■■□□□ 1.56
CHTOP-203ENST00000368690 GRIN2AQ12879 1464 aa24.76■■□□□ 1.55
CHTOP-203ENST00000368690 RAB3GAP2Q9H2M9 1393 aa24.75■■□□□ 1.55
CHTOP-203ENST00000368690 SYNJ2O15056 1496 aa24.75■■□□□ 1.55
CHTOP-203ENST00000368690 TIMELESSQ9UNS1 1208 aa24.73■■□□□ 1.55
CHTOP-203ENST00000368690 KCNH8Q96L42 1107 aa24.71■■□□□ 1.55
CHTOP-203ENST00000368690 FKBP8Q14318 412 aa24.69■■□□□ 1.54
CHTOP-203ENST00000368690 BCL11AQ9H165 835 aa24.69■■□□□ 1.54
CHTOP-203ENST00000368690 SETD5Q9C0A6 1442 aa24.68■■□□□ 1.54
CHTOP-203ENST00000368690 IQGAP2Q13576 1575 aa24.68■■□□□ 1.54
CHTOP-203ENST00000368690 CCER2I3L3R5 266 aa24.68■■□□□ 1.54
CHTOP-203ENST00000368690 FHOD3Q2V2M9 1422 aa24.68■■□□□ 1.54
CHTOP-203ENST00000368690 EFCAB5A4FU69 1503 aa24.67■■□□□ 1.54
CHTOP-203ENST00000368690 TIAM1Q13009 1591 aa24.66■■□□□ 1.54
CHTOP-203ENST00000368690 PPP1R15AO75807 674 aaPredicted RBP24.64■■□□□ 1.54
CHTOP-203ENST00000368690 NEFLP07196 543 aa24.64■■□□□ 1.54
CHTOP-203ENST00000368690 RBM19Q9Y4C8 960 aaKnown RBP24.61■■□□□ 1.53
CHTOP-203ENST00000368690 ATP1B4Q9UN42 357 aaPredicted RBP24.6■■□□□ 1.53
CHTOP-203ENST00000368690 CEP170Q5SW79 1584 aa24.6■■□□□ 1.53
CHTOP-203ENST00000368690 KIAA0586Q9BVV6 1533 aa24.6■■□□□ 1.53
CHTOP-203ENST00000368690 BCANQ96GW7 911 aa24.59■■□□□ 1.53
CHTOP-203ENST00000368690 SAMD9Q5K651 1589 aa24.58■■□□□ 1.52
CHTOP-203ENST00000368690 DDX10Q13206 875 aaKnown RBP24.57■■□□□ 1.52
CHTOP-203ENST00000368690 CHD1O14646 1710 aa24.54■■□□□ 1.52
CHTOP-203ENST00000368690 LRRC9Q6ZRR7 1453 aa24.54■■□□□ 1.52
CHTOP-203ENST00000368690 NUP160Q12769 1436 aa24.53■■□□□ 1.52
CHTOP-203ENST00000368690 ITGAEP38570 1179 aa24.51■■□□□ 1.51
CHTOP-203ENST00000368690 FMN1Q68DA7 1419 aa24.5■■□□□ 1.51
CHTOP-203ENST00000368690 PCF11O94913 1555 aaKnown RBP24.5■■□□□ 1.51
CHTOP-203ENST00000368690 UGGT2Q9NYU1 1516 aa24.49■■□□□ 1.51
CHTOP-203ENST00000368690 CFAP43Q8NDM7 1665 aa24.48■■□□□ 1.51
CHTOP-203ENST00000368690 ANP32CO43423 234 aa24.47■■□□□ 1.51
CHTOP-203ENST00000368690 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.45■■□□□ 1.5
CHTOP-203ENST00000368690 PHLDB1Q86UU1 1377 aa24.44■■□□□ 1.5
CHTOP-203ENST00000368690 JPH4Q96JJ6 628 aa24.44■■□□□ 1.5
CHTOP-203ENST00000368690 SIN3AQ96ST3 1273 aa24.42■■□□□ 1.5
CHTOP-203ENST00000368690 KIAA0556O60303 1618 aa24.41■■□□□ 1.5
CHTOP-203ENST00000368690 FYCO1Q9BQS8 1478 aa24.41■■□□□ 1.5
CHTOP-203ENST00000368690 DISP1Q96F81 1524 aa24.41■■□□□ 1.5
CHTOP-203ENST00000368690 CASKIN1Q8WXD9 1431 aa24.41■■□□□ 1.5
CHTOP-203ENST00000368690 FANCIQ9NVI1 1328 aa24.4■■□□□ 1.5
CHTOP-203ENST00000368690 CARMIL2Q6F5E8 1435 aa24.35■■□□□ 1.49
CHTOP-203ENST00000368690 TRIM52Q96A61 297 aa24.34■■□□□ 1.49
CHTOP-203ENST00000368690 ERICH6BQ5W0A0 696 aa24.31■■□□□ 1.48
CHTOP-203ENST00000368690 ARID3CA6NKF2 412 aa24.3■■□□□ 1.48
CHTOP-203ENST00000368690 MSH5O43196 834 aa24.29■■□□□ 1.48
CHTOP-203ENST00000368690 PRG4Q92954 1404 aaPredicted RBP24.28■■□□□ 1.48
CHTOP-203ENST00000368690 FAM50AQ14320 339 aaKnown RBP24.27■■□□□ 1.48
CHTOP-203ENST00000368690 HECW1Q76N89 1606 aa24.25■■□□□ 1.47
CHTOP-203ENST00000368690 LRRIQ1Q96JM4 1722 aa24.24■■□□□ 1.47
CHTOP-203ENST00000368690 MYT1LQ9UL68 1186 aa24.23■■□□□ 1.47
CHTOP-203ENST00000368690 CDK11AQ9UQ88 783 aaPredicted RBP24.23■■□□□ 1.47
CHTOP-203ENST00000368690 TONSLQ96HA7 1378 aa24.22■■□□□ 1.47
CHTOP-203ENST00000368690 MTUS2Q5JR59 1369 aa24.19■■□□□ 1.46
CHTOP-203ENST00000368690 UACAQ9BZF9 1416 aa24.18■■□□□ 1.46
CHTOP-203ENST00000368690 RAPGEF6Q8TEU7 1601 aa24.18■■□□□ 1.46
CHTOP-203ENST00000368690 CCDC18Q5T9S5 1454 aa24.18■■□□□ 1.46
CHTOP-203ENST00000368690 PLB1Q6P1J6 1458 aa24.18■■□□□ 1.46
CHTOP-203ENST00000368690 CLASP1Q7Z460 1538 aa24.17■■□□□ 1.46
CHTOP-203ENST00000368690 SHROOM2Q13796 1616 aa24.17■■□□□ 1.46
CHTOP-203ENST00000368690 EPRSP07814 1512 aaKnown RBP24.17■■□□□ 1.46
CHTOP-203ENST00000368690 CDK13Q14004 1512 aaKnown RBP24.16■■□□□ 1.46
CHTOP-203ENST00000368690 HFM1A2PYH4 1435 aa24.15■■□□□ 1.46
CHTOP-203ENST00000368690 HIRIP3Q9BW71 556 aaPredicted RBP24.15■■□□□ 1.46
CHTOP-203ENST00000368690 PTPRGP23470 1445 aa24.13■■□□□ 1.45
CHTOP-203ENST00000368690 FGD6Q6ZV73 1430 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms