RNA–Protein interactions for RNA: ENST00000367063.6

CD55-203, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 1,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-203ENST00000367063 CTTNBP2Q8WZ74 1663 aa32.99■■■□□ 2.87
CD55-203ENST00000367063 KIAA0586Q9BVV6 1533 aa32.99■■■□□ 2.87
CD55-203ENST00000367063 CLASP1Q7Z460 1538 aa32.99■■■□□ 2.87
CD55-203ENST00000367063 LOC105371045A0A1W2PR82 267 aa32.96■■■□□ 2.87
CD55-203ENST00000367063 IQGAP2Q13576 1575 aa32.92■■■□□ 2.86
CD55-203ENST00000367063 JPH4Q96JJ6 628 aa32.84■■■□□ 2.85
CD55-203ENST00000367063 TNIKQ9UKE5 1360 aa32.81■■■□□ 2.84
CD55-203ENST00000367063 SHROOM2Q13796 1616 aa32.79■■■□□ 2.84
CD55-203ENST00000367063 RANGAP1P46060 587 aaPredicted RBP32.78■■■□□ 2.84
CD55-203ENST00000367063 UGGT2Q9NYU1 1516 aa32.73■■■□□ 2.83
CD55-203ENST00000367063 PRG4Q92954 1404 aaPredicted RBP32.72■■■□□ 2.83
CD55-203ENST00000367063 ERCC6L2Q5T890 1561 aa32.63■■■□□ 2.81
CD55-203ENST00000367063 CARMIL2Q6F5E8 1435 aa32.63■■■□□ 2.81
CD55-203ENST00000367063 DISP1Q96F81 1524 aa32.63■■■□□ 2.81
CD55-203ENST00000367063 ARHGEF11O15085 1522 aa32.61■■■□□ 2.81
CD55-203ENST00000367063 DNAJC5Q9H3Z4 198 aa32.59■■■□□ 2.81
CD55-203ENST00000367063 KIAA0556O60303 1618 aa32.59■■■□□ 2.81
CD55-203ENST00000367063 SAMD9Q5K651 1589 aa32.58■■■□□ 2.81
CD55-203ENST00000367063 CEP162Q5TB80 1403 aa32.57■■■□□ 2.8
CD55-203ENST00000367063 EFCAB5A4FU69 1503 aa32.57■■■□□ 2.8
CD55-203ENST00000367063 P3H3Q8IVL6 736 aa32.56■■■□□ 2.8
CD55-203ENST00000367063 CLIP1P30622 1438 aa32.56■■■□□ 2.8
CD55-203ENST00000367063 RIMBP3CA6NJZ7 1639 aa32.54■■■□□ 2.8
CD55-203ENST00000367063 RIMBP3BA6NNM3 1639 aa32.54■■■□□ 2.8
CD55-203ENST00000367063 RIMBP3Q9UFD9 1639 aa32.54■■■□□ 2.8
CD55-203ENST00000367063 ARHGAP35Q9NRY4 1499 aa32.52■■■□□ 2.8
CD55-203ENST00000367063 TTBK1Q5TCY1 1321 aaPredicted RBP32.47■■■□□ 2.79
CD55-203ENST00000367063 FHOD3Q2V2M9 1422 aa32.47■■■□□ 2.79
CD55-203ENST00000367063 PTPRGP23470 1445 aa32.41■■■□□ 2.78
CD55-203ENST00000367063 ARAP1Q96P48 1450 aa32.39■■■□□ 2.77
CD55-203ENST00000367063 CYB5RLQ6IPT4 315 aa32.32■■■□□ 2.76
CD55-203ENST00000367063 FMN1Q68DA7 1419 aa32.28■■■□□ 2.76
CD55-203ENST00000367063 PLB1Q6P1J6 1458 aa32.23■■■□□ 2.75
CD55-203ENST00000367063 UACAQ9BZF9 1416 aa32.21■■■□□ 2.75
CD55-203ENST00000367063 ABCA8O94911 1581 aa32.18■■■□□ 2.74
CD55-203ENST00000367063 RAPGEF6Q8TEU7 1601 aa32.16■■■□□ 2.74
CD55-203ENST00000367063 VPS8Q8N3P4 1428 aa32.13■■■□□ 2.73
CD55-203ENST00000367063 ABCC2Q92887 1545 aa32.13■■■□□ 2.73
CD55-203ENST00000367063 ADCY10Q96PN6 1610 aa32.13■■■□□ 2.73
CD55-203ENST00000367063 UHRF1BP1LA0JNW5 1464 aa32.11■■■□□ 2.73
CD55-203ENST00000367063 ATP1B4Q9UN42 357 aaPredicted RBP32.11■■■□□ 2.73
CD55-203ENST00000367063 PCF11O94913 1555 aaKnown RBP32.1■■■□□ 2.73
CD55-203ENST00000367063 CASKIN1Q8WXD9 1431 aa32.08■■■□□ 2.73
CD55-203ENST00000367063 HECW1Q76N89 1606 aa32.05■■■□□ 2.72
CD55-203ENST00000367063 FYCO1Q9BQS8 1478 aa32.04■■■□□ 2.72
CD55-203ENST00000367063 ARID3CA6NKF2 412 aa32.04■■■□□ 2.72
CD55-203ENST00000367063 NUP153P49790 1475 aaKnown RBP32.04■■■□□ 2.72
CD55-203ENST00000367063 NPM1P06748 294 aaKnown RBP eCLIP31.98■■■□□ 2.71
CD55-203ENST00000367063 KDM5BQ9UGL1 1544 aa31.97■■■□□ 2.71
CD55-203ENST00000367063 ATP10BO94823 1461 aa31.94■■■□□ 2.7
CD55-203ENST00000367063 EPRSP07814 1512 aaKnown RBP31.94■■■□□ 2.7
CD55-203ENST00000367063 ZCCHC11Q5TAX3 1644 aaKnown RBP31.93■■■□□ 2.7
CD55-203ENST00000367063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.93■■■□□ 2.7
CD55-203ENST00000367063 HNRNPUL2Q1KMD3 747 aaKnown RBP31.93■■■□□ 2.7
CD55-203ENST00000367063 LRRIQ1Q96JM4 1722 aa31.93■■■□□ 2.7
CD55-203ENST00000367063 CDK13Q14004 1512 aaKnown RBP31.91■■■□□ 2.7
CD55-203ENST00000367063 CCDC18Q5T9S5 1454 aa31.89■■■□□ 2.7
CD55-203ENST00000367063 APLP2Q06481 763 aa31.81■■■□□ 2.68
CD55-203ENST00000367063 MAPKBP1O60336 1514 aa31.77■■■□□ 2.68
CD55-203ENST00000367063 ASXL2Q76L83 1435 aa31.77■■■□□ 2.68
CD55-203ENST00000367063 CDK11AQ9UQ88 783 aaPredicted RBP31.76■■■□□ 2.68
CD55-203ENST00000367063 TIAM1Q13009 1591 aa31.76■■■□□ 2.67
CD55-203ENST00000367063 CFAP43Q8NDM7 1665 aa31.76■■■□□ 2.67
CD55-203ENST00000367063 PLEKHD1A6NEE1 506 aa31.75■■■□□ 2.67
CD55-203ENST00000367063 MAP3K1Q13233 1512 aa31.72■■■□□ 2.67
CD55-203ENST00000367063 WDR7Q9Y4E6 1490 aa31.7■■■□□ 2.67
CD55-203ENST00000367063 MAGI3Q5TCQ9 1506 aa31.67■■■□□ 2.66
CD55-203ENST00000367063 MTUS2Q5JR59 1369 aa31.66■■■□□ 2.66
CD55-203ENST00000367063 KCNH8Q96L42 1107 aa31.64■■■□□ 2.66
CD55-203ENST00000367063 TROQ12816 1431 aaPredicted RBP31.64■■■□□ 2.66
CD55-203ENST00000367063 KANK4Q5T7N3 995 aaPredicted RBP31.62■■■□□ 2.65
CD55-203ENST00000367063 LRRC9Q6ZRR7 1453 aa31.62■■■□□ 2.65
CD55-203ENST00000367063 EHBP1L1Q8N3D4 1523 aa31.59■■■□□ 2.65
CD55-203ENST00000367063 ABCC10Q5T3U5 1492 aa31.54■■■□□ 2.64
CD55-203ENST00000367063 KIF14Q15058 1648 aa31.53■■■□□ 2.64
CD55-203ENST00000367063 DIP2BQ9P265 1576 aa31.53■■■□□ 2.64
CD55-203ENST00000367063 PPARGC1BQ86YN6 1023 aaKnown RBP31.52■■■□□ 2.64
CD55-203ENST00000367063 FAM69CQ0P6D2 419 aa31.5■■■□□ 2.63
CD55-203ENST00000367063 SUPT6HQ7KZ85 1726 aaKnown RBP31.48■■■□□ 2.63
CD55-203ENST00000367063 TRHP20396 242 aaPredicted RBP31.46■■■□□ 2.63
CD55-203ENST00000367063 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.46■■■□□ 2.637e-8■■■□□ 15.9
CD55-203ENST00000367063 KIF13AQ9H1H9 1805 aa31.46■■■□□ 2.63
CD55-203ENST00000367063 GLI2P10070 1586 aa31.45■■■□□ 2.63
CD55-203ENST00000367063 ABCA9Q8IUA7 1624 aa31.43■■■□□ 2.62
CD55-203ENST00000367063 TTC37Q6PGP7 1564 aa31.43■■■□□ 2.62
CD55-203ENST00000367063 NCOA2Q15596 1464 aa31.42■■■□□ 2.62
CD55-203ENST00000367063 MAP3K4Q9Y6R4 1608 aa31.36■■■□□ 2.61
CD55-203ENST00000367063 CD109Q6YHK3 1445 aa31.36■■■□□ 2.61
CD55-203ENST00000367063 CCNB3Q8WWL7 1395 aa31.35■■■□□ 2.61
CD55-203ENST00000367063 MYO5CQ9NQX4 1742 aa31.32■■■□□ 2.6
CD55-203ENST00000367063 TSPOAP1O95153 1857 aa31.29■■■□□ 2.6
CD55-203ENST00000367063 CDC42BPAQ5VT25 1732 aa31.29■■■□□ 2.6
CD55-203ENST00000367063 GPATCH8Q9UKJ3 1502 aaKnown RBP31.29■■■□□ 2.6
CD55-203ENST00000367063 PLCH2O75038 1416 aa31.27■■■□□ 2.6
CD55-203ENST00000367063 PHLDB1Q86UU1 1377 aa31.27■■■□□ 2.6
CD55-203ENST00000367063 PREX2Q70Z35 1606 aa31.25■■■□□ 2.59
CD55-203ENST00000367063 ITSN2Q9NZM3 1697 aa31.25■■■□□ 2.59
CD55-203ENST00000367063 CDC42BPBQ9Y5S2 1711 aa31.24■■■□□ 2.59
CD55-203ENST00000367063 MYOM3Q5VTT5 1437 aa31.23■■■□□ 2.59
CD55-203ENST00000367063 ARHGAP5Q13017 1502 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms