RNA–Protein interactions for RNA: ENST00000366985.5

ATF3-205, Transcript of activating transcription factor 3, humanhuman

TSL 5

Gene ATF3, Length 516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-205ENST00000366985 KDM6BO15054 1643 aa14.04□□□□□ -0.16
ATF3-205ENST00000366985 ABCA5Q8WWZ7 1642 aa14.02□□□□□ -0.16
ATF3-205ENST00000366985 SHROOM2Q13796 1616 aa14.01□□□□□ -0.17
ATF3-205ENST00000366985 ABCA10Q8WWZ4 1543 aa14□□□□□ -0.17
ATF3-205ENST00000366985 FOXD1Q16676 465 aa14□□□□□ -0.17
ATF3-205ENST00000366985 ABCC10Q5T3U5 1492 aa13.99□□□□□ -0.17
ATF3-205ENST00000366985 NUP160Q12769 1436 aa13.98□□□□□ -0.17
ATF3-205ENST00000366985 ADAMTS12P58397 1594 aa13.97□□□□□ -0.17
ATF3-205ENST00000366985 PRG4Q92954 1404 aaPredicted RBP13.95□□□□□ -0.18
ATF3-205ENST00000366985 MAPKBP1O60336 1514 aa13.95□□□□□ -0.18
ATF3-205ENST00000366985 FHAD1B1AJZ9 1412 aa13.94□□□□□ -0.18
ATF3-205ENST00000366985 ADGRL1O94910 1474 aa13.93□□□□□ -0.18
ATF3-205ENST00000366985 DIP2BQ9P265 1576 aa13.93□□□□□ -0.18
ATF3-205ENST00000366985 TSPOAP1O95153 1857 aa13.93□□□□□ -0.18
ATF3-205ENST00000366985 WRNQ14191 1432 aaPredicted RBP eCLIP13.91□□□□□ -0.18
ATF3-205ENST00000366985 JPH4Q96JJ6 628 aa13.89□□□□□ -0.19
ATF3-205ENST00000366985 SPATA31D1Q6ZQQ2 1576 aa13.88□□□□□ -0.19
ATF3-205ENST00000366985 ERICH3Q5RHP9 1530 aa13.87□□□□□ -0.19
ATF3-205ENST00000366985 ADCY10Q96PN6 1610 aa13.82□□□□□ -0.2
ATF3-205ENST00000366985 RUSC2Q8N2Y8 1516 aa13.79□□□□□ -0.2
ATF3-205ENST00000366985 BIVM-ERCC5R4GMW8 1640 aa13.76□□□□□ -0.21
ATF3-205ENST00000366985 TOP2BQ02880 1626 aa13.75□□□□□ -0.21
ATF3-205ENST00000366985 PLPPR3Q6T4P5 718 aa13.72□□□□□ -0.21
ATF3-205ENST00000366985 PLB1Q6P1J6 1458 aa13.72□□□□□ -0.21
ATF3-205ENST00000366985 TEX14Q8IWB6 1497 aa13.72□□□□□ -0.21
ATF3-205ENST00000366985 PTPRGP23470 1445 aa13.69□□□□□ -0.22
ATF3-205ENST00000366985 GLI2P10070 1586 aa13.69□□□□□ -0.22
ATF3-205ENST00000366985 KIAA0586Q9BVV6 1533 aa13.69□□□□□ -0.22
ATF3-205ENST00000366985 TTBK1Q5TCY1 1321 aaPredicted RBP13.68□□□□□ -0.22
ATF3-205ENST00000366985 CARMIL2Q6F5E8 1435 aa13.68□□□□□ -0.22
ATF3-205ENST00000366985 ASXL2Q76L83 1435 aa13.66□□□□□ -0.22
ATF3-205ENST00000366985 ABCC2Q92887 1545 aa13.66□□□□□ -0.22
ATF3-205ENST00000366985 CERKQ8TCT0 537 aa13.66□□□□□ -0.22
ATF3-205ENST00000366985 CUL7Q14999 1698 aa13.64□□□□□ -0.23
ATF3-205ENST00000366985 PPRC1Q5VV67 1664 aaKnown RBP13.64□□□□□ -0.23
ATF3-205ENST00000366985 TNIKQ9UKE5 1360 aa13.61□□□□□ -0.23
ATF3-205ENST00000366985 MAP3K4Q9Y6R4 1608 aa13.6□□□□□ -0.23
ATF3-205ENST00000366985 UHRF1BP1LA0JNW5 1464 aa13.56□□□□□ -0.24
ATF3-205ENST00000366985 EPRSP07814 1512 aaKnown RBP13.55□□□□□ -0.24
ATF3-205ENST00000366985 UACAQ9BZF9 1416 aa13.55□□□□□ -0.24
ATF3-205ENST00000366985 KIF27Q86VH2 1401 aa13.52□□□□□ -0.25
ATF3-205ENST00000366985 COL17A1Q9UMD9 1497 aaPredicted RBP13.52□□□□□ -0.25
ATF3-205ENST00000366985 IQGAP2Q13576 1575 aa13.51□□□□□ -0.25
ATF3-205ENST00000366985 ZCCHC11Q5TAX3 1644 aaKnown RBP13.5□□□□□ -0.25
ATF3-205ENST00000366985 KDM5BQ9UGL1 1544 aa13.49□□□□□ -0.25
ATF3-205ENST00000366985 SUPT5HO00267 1087 aaKnown RBP13.49□□□□□ -0.25
ATF3-205ENST00000366985 CFAP43Q8NDM7 1665 aa13.49□□□□□ -0.25
ATF3-205ENST00000366985 KIF21BO75037 1637 aa13.47□□□□□ -0.25
ATF3-205ENST00000366985 FAM9AQ8IZU1 332 aaPredicted RBP13.47□□□□□ -0.25
ATF3-205ENST00000366985 IGF1RP08069 1367 aa13.46□□□□□ -0.25
ATF3-205ENST00000366985 WDR7Q9Y4E6 1490 aa13.46□□□□□ -0.25
ATF3-205ENST00000366985 CD109Q6YHK3 1445 aa13.46□□□□□ -0.26
ATF3-205ENST00000366985 CARMIL1Q5VZK9 1371 aa13.44□□□□□ -0.26
ATF3-205ENST00000366985 MAGI3Q5TCQ9 1506 aa13.43□□□□□ -0.26
ATF3-205ENST00000366985 PTPRMP28827 1452 aa13.42□□□□□ -0.26
ATF3-205ENST00000366985 KCNH8Q96L42 1107 aa13.41□□□□□ -0.26
ATF3-205ENST00000366985 PCF11O94913 1555 aaKnown RBP13.4□□□□□ -0.26
ATF3-205ENST00000366985 ARID4BQ4LE39 1312 aaPredicted RBP13.39□□□□□ -0.27
ATF3-205ENST00000366985 DISP1Q96F81 1524 aa13.37□□□□□ -0.27
ATF3-205ENST00000366985 KIAA0556O60303 1618 aa13.36□□□□□ -0.27
ATF3-205ENST00000366985 ADAMTSL3P82987 1691 aa13.36□□□□□ -0.27
ATF3-205ENST00000366985 PHLDB1Q86UU1 1377 aa13.35□□□□□ -0.27
ATF3-205ENST00000366985 ARAP3Q8WWN8 1544 aa13.35□□□□□ -0.27
ATF3-205ENST00000366985 UGGT2Q9NYU1 1516 aa13.34□□□□□ -0.27
ATF3-205ENST00000366985 GOLGA3Q08378 1498 aa13.32□□□□□ -0.28
ATF3-205ENST00000366985 BCORL1Q5H9F3 1711 aa13.32□□□□□ -0.28
ATF3-205ENST00000366985 HSPA2P54652 639 aa13.3□□□□□ -0.28
ATF3-205ENST00000366985 MADDQ8WXG6 1647 aa13.3□□□□□ -0.28
ATF3-205ENST00000366985 RAPGEF2Q9Y4G8 1499 aa13.29□□□□□ -0.28
ATF3-205ENST00000366985 RIMS1Q86UR5 1692 aaKnown RBP13.28□□□□□ -0.28
ATF3-205ENST00000366985 POGZQ7Z3K3 1410 aa13.28□□□□□ -0.28
ATF3-205ENST00000366985 CTTNBP2Q8WZ74 1663 aa13.26□□□□□ -0.29
ATF3-205ENST00000366985 DMRT2Q9Y5R5 561 aa13.25□□□□□ -0.29
ATF3-205ENST00000366985 NEO1Q92859 1461 aa13.24□□□□□ -0.29
ATF3-205ENST00000366985 ABCA8O94911 1581 aa13.23□□□□□ -0.29
ATF3-205ENST00000366985 FANCAO15360 1455 aa13.23□□□□□ -0.29
ATF3-205ENST00000366985 ABCA9Q8IUA7 1624 aa13.22□□□□□ -0.29
ATF3-205ENST00000366985 RAPGEF3O95398 923 aa13.22□□□□□ -0.29
ATF3-205ENST00000366985 ADRA2BP18089 450 aa13.22□□□□□ -0.29
ATF3-205ENST00000366985 PPP6R1Q9UPN7 881 aa13.22□□□□□ -0.29
ATF3-205ENST00000366985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.2□□□□□ -0.3
ATF3-205ENST00000366985 HNRNPUL2Q1KMD3 747 aaKnown RBP13.2□□□□□ -0.3
ATF3-205ENST00000366985 ARHGEF40Q8TER5 1519 aa13.18□□□□□ -0.3
ATF3-205ENST00000366985 CFAP74Q9C0B2 1584 aa13.17□□□□□ -0.3
ATF3-205ENST00000366985 AKNAQ7Z591 1439 aa13.17□□□□□ -0.3
ATF3-205ENST00000366985 PIAS4Q8N2W9 510 aaPredicted RBP13.17□□□□□ -0.3
ATF3-205ENST00000366985 PREX1Q8TCU6 1659 aa13.15□□□□□ -0.3
ATF3-205ENST00000366985 FER1L4A9Z1Z3 1794 aa13.15□□□□□ -0.3
ATF3-205ENST00000366985 ARID3CA6NKF2 412 aa13.15□□□□□ -0.3
ATF3-205ENST00000366985 DENND4BO75064 1496 aaPredicted RBP13.15□□□□□ -0.3
ATF3-205ENST00000366985 EFCAB5A4FU69 1503 aa13.13□□□□□ -0.31
ATF3-205ENST00000366985 MED1Q15648 1581 aaPredicted RBP13.12□□□□□ -0.31
ATF3-205ENST00000366985 FRMPD1Q5SYB0 1578 aa13.12□□□□□ -0.31
ATF3-205ENST00000366985 YEATS2Q9ULM3 1422 aa13.12□□□□□ -0.31
ATF3-205ENST00000366985 ATP10BO94823 1461 aa13.1□□□□□ -0.31
ATF3-205ENST00000366985 ZFYVE16Q7Z3T8 1539 aa13.1□□□□□ -0.31
ATF3-205ENST00000366985 MLECQ14165 292 aa13.1□□□□□ -0.31
ATF3-205ENST00000366985 TTC37Q6PGP7 1564 aa13.1□□□□□ -0.31
ATF3-205ENST00000366985 RICTORQ6R327 1708 aa13.1□□□□□ -0.31
ATF3-205ENST00000366985 MSH5O43196 834 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms