RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 TRHP20396 242 aaPredicted RBP28.91■■■□□ 2.22
PRKN-202ENST00000366892 PRG4Q92954 1404 aaPredicted RBP28.9■■■□□ 2.22
PRKN-202ENST00000366892 RUSC2Q8N2Y8 1516 aa28.86■■■□□ 2.21
PRKN-202ENST00000366892 KIAA0586Q9BVV6 1533 aa28.83■■■□□ 2.21
PRKN-202ENST00000366892 RAPGEF2Q9Y4G8 1499 aa28.67■■■□□ 2.18
PRKN-202ENST00000366892 IQGAP2Q13576 1575 aa28.56■■■□□ 2.16
PRKN-202ENST00000366892 CARMIL2Q6F5E8 1435 aa28.54■■■□□ 2.16
PRKN-202ENST00000366892 PTPRGP23470 1445 aa28.52■■■□□ 2.16
PRKN-202ENST00000366892 NPM1P06748 294 aaKnown RBP eCLIP28.51■■■□□ 2.15
PRKN-202ENST00000366892 TTBK1Q5TCY1 1321 aaPredicted RBP28.5■■■□□ 2.15
PRKN-202ENST00000366892 TNIKQ9UKE5 1360 aa28.49■■■□□ 2.15
PRKN-202ENST00000366892 PRXQ9BXM0 1461 aa28.49■■■□□ 2.15
PRKN-202ENST00000366892 ADCY10Q96PN6 1610 aa28.44■■■□□ 2.14
PRKN-202ENST00000366892 DISP1Q96F81 1524 aa28.44■■■□□ 2.14
PRKN-202ENST00000366892 CSRNP3Q8WYN3 585 aa28.43■■■□□ 2.14
PRKN-202ENST00000366892 UGGT2Q9NYU1 1516 aa28.43■■■□□ 2.14
PRKN-202ENST00000366892 MAPKBP1O60336 1514 aa28.34■■■□□ 2.13
PRKN-202ENST00000366892 FAM69CQ0P6D2 419 aa28.33■■■□□ 2.13
PRKN-202ENST00000366892 ABCC10Q5T3U5 1492 aa28.31■■■□□ 2.12
PRKN-202ENST00000366892 CTTNBP2Q8WZ74 1663 aa28.3■■■□□ 2.12
PRKN-202ENST00000366892 EEA1Q15075 1411 aa28.3■■■□□ 2.12
PRKN-202ENST00000366892 KIAA0556O60303 1618 aa28.29■■■□□ 2.12
PRKN-202ENST00000366892 UACAQ9BZF9 1416 aa28.29■■■□□ 2.12
PRKN-202ENST00000366892 CHIC1Q5VXU3 224 aa28.28■■■□□ 2.12
PRKN-202ENST00000366892 KIF13AQ9H1H9 1805 aa28.28■■■□□ 2.12
PRKN-202ENST00000366892 FAM9AQ8IZU1 332 aaPredicted RBP28.28■■■□□ 2.12
PRKN-202ENST00000366892 ABCC2Q92887 1545 aa28.27■■■□□ 2.12
PRKN-202ENST00000366892 UHRF1BP1LA0JNW5 1464 aa28.26■■■□□ 2.12
PRKN-202ENST00000366892 GOLGA3Q08378 1498 aa28.24■■■□□ 2.11
PRKN-202ENST00000366892 DIP2BQ9P265 1576 aa28.2■■■□□ 2.1
PRKN-202ENST00000366892 ASXL2Q76L83 1435 aa28.15■■■□□ 2.1
PRKN-202ENST00000366892 KDM5BQ9UGL1 1544 aa28.14■■■□□ 2.1
PRKN-202ENST00000366892 PLB1Q6P1J6 1458 aa28.12■■■□□ 2.09
PRKN-202ENST00000366892 P3H3Q8IVL6 736 aa28.12■■■□□ 2.09
PRKN-202ENST00000366892 ABCA8O94911 1581 aa28.03■■■□□ 2.08
PRKN-202ENST00000366892 ZCCHC11Q5TAX3 1644 aaKnown RBP28.02■■■□□ 2.08
PRKN-202ENST00000366892 RANGAP1P46060 587 aaPredicted RBP28.02■■■□□ 2.08
PRKN-202ENST00000366892 KIF21BO75037 1637 aa28■■■□□ 2.07
PRKN-202ENST00000366892 GLI2P10070 1586 aa27.99■■■□□ 2.07
PRKN-202ENST00000366892 SAMD9Q5K651 1589 aa27.98■■■□□ 2.07
PRKN-202ENST00000366892 EPRSP07814 1512 aaKnown RBP27.97■■■□□ 2.07
PRKN-202ENST00000366892 TSPOAP1O95153 1857 aa27.95■■■□□ 2.07
PRKN-202ENST00000366892 EHMT2Q96KQ7 1210 aa27.94■■■□□ 2.06
PRKN-202ENST00000366892 WDR7Q9Y4E6 1490 aa27.93■■■□□ 2.06
PRKN-202ENST00000366892 UBTFP17480 764 aaKnown RBP27.91■■■□□ 2.06
PRKN-202ENST00000366892 ARID3CA6NKF2 412 aa27.9■■■□□ 2.06
PRKN-202ENST00000366892 KCNH8Q96L42 1107 aa27.88■■■□□ 2.05
PRKN-202ENST00000366892 FHOD3Q2V2M9 1422 aa27.87■■■□□ 2.05
PRKN-202ENST00000366892 ATP10BO94823 1461 aa27.86■■■□□ 2.05
PRKN-202ENST00000366892 KDM6BO15054 1643 aa27.84■■■□□ 2.05
PRKN-202ENST00000366892 PPRC1Q5VV67 1664 aaKnown RBP27.82■■■□□ 2.04
PRKN-202ENST00000366892 MAP3K4Q9Y6R4 1608 aa27.81■■■□□ 2.04
PRKN-202ENST00000366892 EFCAB5A4FU69 1503 aa27.79■■■□□ 2.04
PRKN-202ENST00000366892 RAPGEF6Q8TEU7 1601 aa27.78■■■□□ 2.04
PRKN-202ENST00000366892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.76■■■□□ 2.03
PRKN-202ENST00000366892 HNRNPUL2Q1KMD3 747 aaKnown RBP27.76■■■□□ 2.03
PRKN-202ENST00000366892 CD109Q6YHK3 1445 aa27.75■■■□□ 2.03
PRKN-202ENST00000366892 NUP153P49790 1475 aaKnown RBP27.74■■■□□ 2.03
PRKN-202ENST00000366892 TEX14Q8IWB6 1497 aa27.74■■■□□ 2.03
PRKN-202ENST00000366892 AEBP2Q6ZN18 517 aaPredicted RBP27.72■■■□□ 2.03
PRKN-202ENST00000366892 COL17A1Q9UMD9 1497 aaPredicted RBP27.72■■■□□ 2.03
PRKN-202ENST00000366892 MAGI3Q5TCQ9 1506 aa27.68■■■□□ 2.02
PRKN-202ENST00000366892 CFAP43Q8NDM7 1665 aa27.66■■■□□ 2.02
PRKN-202ENST00000366892 ARHGAP35Q9NRY4 1499 aa27.66■■■□□ 2.02
PRKN-202ENST00000366892 PLEKHD1A6NEE1 506 aa27.62■■■□□ 2.01
PRKN-202ENST00000366892 FMN1Q68DA7 1419 aa27.59■■■□□ 2.01
PRKN-202ENST00000366892 ATP1B4Q9UN42 357 aaPredicted RBP27.56■■■□□ 2
PRKN-202ENST00000366892 ABCA9Q8IUA7 1624 aa27.55■■■□□ 2
PRKN-202ENST00000366892 KDM4FA0A1W2PPD8 638 aa27.51■■□□□ 1.99
PRKN-202ENST00000366892 CDK13Q14004 1512 aaKnown RBP27.49■■□□□ 1.99
PRKN-202ENST00000366892 PHLDB1Q86UU1 1377 aa27.47■■□□□ 1.99
PRKN-202ENST00000366892 ARAP3Q8WWN8 1544 aa27.46■■□□□ 1.99
PRKN-202ENST00000366892 HECW1Q76N89 1606 aa27.43■■□□□ 1.98
PRKN-202ENST00000366892 NEO1Q92859 1461 aa27.41■■□□□ 1.98
PRKN-202ENST00000366892 CDK11AQ9UQ88 783 aaPredicted RBP27.41■■□□□ 1.98
PRKN-202ENST00000366892 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.39■■□□□ 1.98
PRKN-202ENST00000366892 RAPGEF3O95398 923 aa27.37■■□□□ 1.97
PRKN-202ENST00000366892 CLIP1P30622 1438 aa27.36■■□□□ 1.97
PRKN-202ENST00000366892 CASKIN1Q8WXD9 1431 aa27.34■■□□□ 1.97
PRKN-202ENST00000366892 TTC37Q6PGP7 1564 aa27.32■■□□□ 1.96
PRKN-202ENST00000366892 AKNAQ7Z591 1439 aa27.3■■□□□ 1.96
PRKN-202ENST00000366892 FANCAO15360 1455 aa27.3■■□□□ 1.96
PRKN-202ENST00000366892 ADGRL1O94910 1474 aa27.3■■□□□ 1.96
PRKN-202ENST00000366892 TROQ12816 1431 aaPredicted RBP27.28■■□□□ 1.96
PRKN-202ENST00000366892 PLCH2O75038 1416 aa27.27■■□□□ 1.96
PRKN-202ENST00000366892 LRRIQ1Q96JM4 1722 aa27.26■■□□□ 1.95
PRKN-202ENST00000366892 PCF11O94913 1555 aaKnown RBP27.26■■□□□ 1.95
PRKN-202ENST00000366892 CCDC18Q5T9S5 1454 aa27.23■■□□□ 1.95
PRKN-202ENST00000366892 DENND4BO75064 1496 aaPredicted RBP27.22■■□□□ 1.95
PRKN-202ENST00000366892 FYCO1Q9BQS8 1478 aa27.21■■□□□ 1.95
PRKN-202ENST00000366892 EFCAB2Q5VUJ9 269 aa27.21■■□□□ 1.95
PRKN-202ENST00000366892 KIF14Q15058 1648 aa27.2■■□□□ 1.95
PRKN-202ENST00000366892 FRMPD1Q5SYB0 1578 aa27.2■■□□□ 1.95
PRKN-202ENST00000366892 CFAP74Q9C0B2 1584 aa27.19■■□□□ 1.94
PRKN-202ENST00000366892 LOC105371045A0A1W2PR82 267 aa27.16■■□□□ 1.94
PRKN-202ENST00000366892 CEP162Q5TB80 1403 aa27.15■■□□□ 1.94
PRKN-202ENST00000366892 SCAPERQ9BY12 1400 aa27.15■■□□□ 1.94
PRKN-202ENST00000366892 RICTORQ6R327 1708 aa27.12■■□□□ 1.93
PRKN-202ENST00000366892 MYO5CQ9NQX4 1742 aa27.11■■□□□ 1.93
PRKN-202ENST00000366892 ARHGAP5Q13017 1502 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms