RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 CYB5RLQ6IPT4 315 aa17.3■□□□□ 0.36
H3F3A-202ENST00000366814 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
H3F3A-202ENST00000366814 GRIN2AQ12879 1464 aa17.29■□□□□ 0.36
H3F3A-202ENST00000366814 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
H3F3A-202ENST00000366814 KIF27Q86VH2 1401 aa17.25■□□□□ 0.35
H3F3A-202ENST00000366814 CSRNP3Q8WYN3 585 aa17.25■□□□□ 0.35
H3F3A-202ENST00000366814 ARAP1Q96P48 1450 aa17.21■□□□□ 0.35
H3F3A-202ENST00000366814 CEP170Q5SW79 1584 aa17.2■□□□□ 0.34
H3F3A-202ENST00000366814 IGF1RP08069 1367 aa17.2■□□□□ 0.34
H3F3A-202ENST00000366814 RUSC2Q8N2Y8 1516 aa17.2■□□□□ 0.34
H3F3A-202ENST00000366814 NUP160Q12769 1436 aa17.19■□□□□ 0.34
H3F3A-202ENST00000366814 GOLGA3Q08378 1498 aa17.18■□□□□ 0.34
H3F3A-202ENST00000366814 PCGF6Q9BYE7 350 aa17.17■□□□□ 0.34
H3F3A-202ENST00000366814 TNIKQ9UKE5 1360 aa17.15■□□□□ 0.34
H3F3A-202ENST00000366814 PPP4R3CPQ6ZMV5 832 aa17.15■□□□□ 0.34
H3F3A-202ENST00000366814 KIF21BO75037 1637 aa17.15■□□□□ 0.34
H3F3A-202ENST00000366814 CUL7Q14999 1698 aa17.14■□□□□ 0.33
H3F3A-202ENST00000366814 TRIM26Q12899 539 aaPredicted RBP17.13■□□□□ 0.33
H3F3A-202ENST00000366814 CARMIL1Q5VZK9 1371 aa17.11■□□□□ 0.33
H3F3A-202ENST00000366814 UBTFP17480 764 aaKnown RBP17.1■□□□□ 0.33
H3F3A-202ENST00000366814 JPH4Q96JJ6 628 aa17.1■□□□□ 0.33
H3F3A-202ENST00000366814 CEP162Q5TB80 1403 aa17.08■□□□□ 0.33
H3F3A-202ENST00000366814 ERCC6L2Q5T890 1561 aa17.08■□□□□ 0.32
H3F3A-202ENST00000366814 SHROOM2Q13796 1616 aa17.08■□□□□ 0.32
H3F3A-202ENST00000366814 PRG4Q92954 1404 aaPredicted RBP17.05■□□□□ 0.32
H3F3A-202ENST00000366814 KIAA0586Q9BVV6 1533 aa17.03■□□□□ 0.32
H3F3A-202ENST00000366814 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
H3F3A-202ENST00000366814 RAPGEF2Q9Y4G8 1499 aa16.98■□□□□ 0.31
H3F3A-202ENST00000366814 PRXQ9BXM0 1461 aa16.93■□□□□ 0.3
H3F3A-202ENST00000366814 IQGAP2Q13576 1575 aa16.91■□□□□ 0.3
H3F3A-202ENST00000366814 HRCP23327 699 aa16.9■□□□□ 0.3
H3F3A-202ENST00000366814 CLIP1P30622 1438 aa16.9■□□□□ 0.3
H3F3A-202ENST00000366814 TTBK1Q5TCY1 1321 aaPredicted RBP16.9■□□□□ 0.3
H3F3A-202ENST00000366814 CARMIL2Q6F5E8 1435 aa16.88■□□□□ 0.29
H3F3A-202ENST00000366814 NPM1P06748 294 aaKnown RBP eCLIP16.86■□□□□ 0.29
H3F3A-202ENST00000366814 PTPRGP23470 1445 aa16.85■□□□□ 0.29
H3F3A-202ENST00000366814 CTTNBP2Q8WZ74 1663 aa16.82■□□□□ 0.28
H3F3A-202ENST00000366814 UGGT2Q9NYU1 1516 aa16.79■□□□□ 0.28
H3F3A-202ENST00000366814 VPS8Q8N3P4 1428 aa16.79■□□□□ 0.28
H3F3A-202ENST00000366814 DISP1Q96F81 1524 aa16.78■□□□□ 0.28
H3F3A-202ENST00000366814 PPARGC1BQ86YN6 1023 aaKnown RBP16.78■□□□□ 0.28
H3F3A-202ENST00000366814 ADCY10Q96PN6 1610 aa16.78■□□□□ 0.28
H3F3A-202ENST00000366814 KIAA0556O60303 1618 aa16.74■□□□□ 0.27
H3F3A-202ENST00000366814 APLP2Q06481 763 aa16.73■□□□□ 0.27
H3F3A-202ENST00000366814 MSH5O43196 834 aa16.72■□□□□ 0.27
H3F3A-202ENST00000366814 RANGAP1P46060 587 aaPredicted RBP16.71■□□□□ 0.27
H3F3A-202ENST00000366814 UACAQ9BZF9 1416 aa16.71■□□□□ 0.27
H3F3A-202ENST00000366814 FAM69CQ0P6D2 419 aa16.69■□□□□ 0.26
H3F3A-202ENST00000366814 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
H3F3A-202ENST00000366814 KIF13AQ9H1H9 1805 aa16.69■□□□□ 0.26
H3F3A-202ENST00000366814 MAPKBP1O60336 1514 aa16.69■□□□□ 0.26
H3F3A-202ENST00000366814 ABCC2Q92887 1545 aa16.67■□□□□ 0.26
H3F3A-202ENST00000366814 P3H3Q8IVL6 736 aa16.67■□□□□ 0.26
H3F3A-202ENST00000366814 UHRF1BP1LA0JNW5 1464 aa16.67■□□□□ 0.26
H3F3A-202ENST00000366814 NPM3O75607 178 aaKnown RBP16.66■□□□□ 0.26
H3F3A-202ENST00000366814 ZEB1P37275 1124 aaPredicted RBP16.66■□□□□ 0.26
H3F3A-202ENST00000366814 ABCC10Q5T3U5 1492 aa16.65■□□□□ 0.26
H3F3A-202ENST00000366814 DIP2BQ9P265 1576 aa16.61■□□□□ 0.25
H3F3A-202ENST00000366814 PLB1Q6P1J6 1458 aa16.61■□□□□ 0.25
H3F3A-202ENST00000366814 ARHGAP35Q9NRY4 1499 aa16.61■□□□□ 0.25
H3F3A-202ENST00000366814 ASXL2Q76L83 1435 aa16.6■□□□□ 0.25
H3F3A-202ENST00000366814 KDM5BQ9UGL1 1544 aa16.59■□□□□ 0.25
H3F3A-202ENST00000366814 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
H3F3A-202ENST00000366814 ZCCHC11Q5TAX3 1644 aaKnown RBP16.58■□□□□ 0.24
H3F3A-202ENST00000366814 TSPOAP1O95153 1857 aa16.57■□□□□ 0.24
H3F3A-202ENST00000366814 ABCA8O94911 1581 aa16.56■□□□□ 0.24
H3F3A-202ENST00000366814 SAMD9Q5K651 1589 aa16.56■□□□□ 0.24
H3F3A-202ENST00000366814 ARID3CA6NKF2 412 aa16.53■□□□□ 0.24
H3F3A-202ENST00000366814 EFCAB5A4FU69 1503 aa16.52■□□□□ 0.24
H3F3A-202ENST00000366814 FHOD3Q2V2M9 1422 aa16.5■□□□□ 0.23
H3F3A-202ENST00000366814 KCNH8Q96L42 1107 aa16.5■□□□□ 0.23
H3F3A-202ENST00000366814 GLI2P10070 1586 aa16.49■□□□□ 0.23
H3F3A-202ENST00000366814 MAPK8IP2Q13387 824 aaPredicted RBP16.49■□□□□ 0.23
H3F3A-202ENST00000366814 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
H3F3A-202ENST00000366814 EPRSP07814 1512 aaKnown RBP16.49■□□□□ 0.23
H3F3A-202ENST00000366814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.48■□□□□ 0.23
H3F3A-202ENST00000366814 HNRNPUL2Q1KMD3 747 aaKnown RBP16.48■□□□□ 0.23
H3F3A-202ENST00000366814 WDR7Q9Y4E6 1490 aa16.48■□□□□ 0.23
H3F3A-202ENST00000366814 RAPGEF6Q8TEU7 1601 aa16.47■□□□□ 0.23
H3F3A-202ENST00000366814 SCAF1Q9H7N4 1312 aaKnown RBP16.47■□□□□ 0.23
H3F3A-202ENST00000366814 ATP10BO94823 1461 aa16.45■□□□□ 0.22
H3F3A-202ENST00000366814 MAP3K1Q13233 1512 aa16.45■□□□□ 0.22
H3F3A-202ENST00000366814 CCER1Q8TC90 406 aaPredicted RBP16.42■□□□□ 0.22
H3F3A-202ENST00000366814 KDM6BO15054 1643 aa16.42■□□□□ 0.22
H3F3A-202ENST00000366814 MAP3K4Q9Y6R4 1608 aa16.41■□□□□ 0.22
H3F3A-202ENST00000366814 PPRC1Q5VV67 1664 aaKnown RBP16.4■□□□□ 0.22
H3F3A-202ENST00000366814 ATP1B4Q9UN42 357 aaPredicted RBP16.4■□□□□ 0.22
H3F3A-202ENST00000366814 TIAM1Q13009 1591 aa16.4■□□□□ 0.22
H3F3A-202ENST00000366814 NUP153P49790 1475 aaKnown RBP16.39■□□□□ 0.21
H3F3A-202ENST00000366814 FMN1Q68DA7 1419 aa16.38■□□□□ 0.21
H3F3A-202ENST00000366814 CD109Q6YHK3 1445 aa16.38■□□□□ 0.21
H3F3A-202ENST00000366814 TEX14Q8IWB6 1497 aa16.38■□□□□ 0.21
H3F3A-202ENST00000366814 FYCO1Q9BQS8 1478 aa16.38■□□□□ 0.21
H3F3A-202ENST00000366814 PCF11O94913 1555 aaKnown RBP16.37■□□□□ 0.21
H3F3A-202ENST00000366814 KANK4Q5T7N3 995 aaPredicted RBP16.37■□□□□ 0.21
H3F3A-202ENST00000366814 CFAP43Q8NDM7 1665 aa16.36■□□□□ 0.21
H3F3A-202ENST00000366814 PLEKHD1A6NEE1 506 aa16.36■□□□□ 0.21
H3F3A-202ENST00000366814 CASKIN1Q8WXD9 1431 aa16.34■□□□□ 0.21
H3F3A-202ENST00000366814 RRBP1Q9P2E9 1410 aaKnown RBP16.32■□□□□ 0.2
H3F3A-202ENST00000366814 LRRC9Q6ZRR7 1453 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms