RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 NISCHQ9Y2I1 1504 aa24.54■■□□□ 1.52
H3F3A-202ENST00000366814 AEBP2Q6ZN18 517 aaPredicted RBP23.8■■□□□ 1.4
H3F3A-202ENST00000366814 CHIC1Q5VXU3 224 aa23.59■■□□□ 1.37
H3F3A-202ENST00000366814 CCDC180Q9P1Z9 1646 aa21.85■■□□□ 1.09
H3F3A-202ENST00000366814 ABCC9O60706 1549 aa21.59■■□□□ 1.05
H3F3A-202ENST00000366814 PHF23Q9BUL5 403 aaPredicted RBP20.94■□□□□ 0.94
H3F3A-202ENST00000366814 DCAF8L2P0C7V8 631 aa20.72■□□□□ 0.91
H3F3A-202ENST00000366814 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
H3F3A-202ENST00000366814 NACADO15069 1562 aa20.6■□□□□ 0.89
H3F3A-202ENST00000366814 MYO15BQ96JP2 1530 aa20.39■□□□□ 0.85
H3F3A-202ENST00000366814 ZCCHC6Q5VYS8 1495 aaKnown RBP20.38■□□□□ 0.85
H3F3A-202ENST00000366814 DCAF1Q9Y4B6 1507 aa20.26■□□□□ 0.83
H3F3A-202ENST00000366814 UNC13AQ9UPW8 1703 aa20.21■□□□□ 0.83
H3F3A-202ENST00000366814 PABPN1Q86U42 306 aaKnown RBP eCLIP20.18■□□□□ 0.82
H3F3A-202ENST00000366814 BICRAQ9NZM4 1560 aa20.02■□□□□ 0.8
H3F3A-202ENST00000366814 SCRIBQ14160 1630 aa19.98■□□□□ 0.79
H3F3A-202ENST00000366814 DNAJC5BQ9UF47 199 aa19.94■□□□□ 0.78
H3F3A-202ENST00000366814 SENP3Q9H4L4 574 aaPredicted RBP19.9■□□□□ 0.78
H3F3A-202ENST00000366814 SHROOM4Q9ULL8 1493 aa19.76■□□□□ 0.75
H3F3A-202ENST00000366814 EIF4G1Q04637 1599 aaKnown RBP19.52■□□□□ 0.72
H3F3A-202ENST00000366814 CC2D2AQ9P2K1 1620 aa19.5■□□□□ 0.71
H3F3A-202ENST00000366814 CECR2Q9BXF3 1484 aa19.4■□□□□ 0.7
H3F3A-202ENST00000366814 PLPPR3Q6T4P5 718 aa19.32■□□□□ 0.68
H3F3A-202ENST00000366814 SMARCA4P51532 1647 aa19.07■□□□□ 0.64
H3F3A-202ENST00000366814 BAZ1AQ9NRL2 1556 aaPredicted RBP19.03■□□□□ 0.64
H3F3A-202ENST00000366814 SUPT5HO00267 1087 aaKnown RBP19.02■□□□□ 0.64
H3F3A-202ENST00000366814 NCAPD3P42695 1498 aa19■□□□□ 0.63
H3F3A-202ENST00000366814 ATAD2BQ9ULI0 1458 aa19■□□□□ 0.63
H3F3A-202ENST00000366814 SMARCA2P51531 1590 aa18.97■□□□□ 0.63
H3F3A-202ENST00000366814 MROH2BQ7Z745 1585 aa18.91■□□□□ 0.62
H3F3A-202ENST00000366814 HMGXB3Q12766 1538 aa18.88■□□□□ 0.61
H3F3A-202ENST00000366814 BAZ1BQ9UIG0 1483 aaKnown RBP18.86■□□□□ 0.61
H3F3A-202ENST00000366814 PEG3Q9GZU2 1588 aa18.84■□□□□ 0.61
H3F3A-202ENST00000366814 WIZO95785 1651 aa18.73■□□□□ 0.59
H3F3A-202ENST00000366814 RSF1Q96T23 1441 aaPredicted RBP18.65■□□□□ 0.58
H3F3A-202ENST00000366814 ERCC6Q03468 1493 aa18.63■□□□□ 0.57
H3F3A-202ENST00000366814 NESP48681 1621 aa18.62■□□□□ 0.57
H3F3A-202ENST00000366814 FOXD1Q16676 465 aa18.54■□□□□ 0.56
H3F3A-202ENST00000366814 LAMC3Q9Y6N6 1575 aa18.53■□□□□ 0.56
H3F3A-202ENST00000366814 TOP2AP11388 1531 aaKnown RBP18.48■□□□□ 0.55
H3F3A-202ENST00000366814 CADPSQ9ULU8 1353 aa18.48■□□□□ 0.55
H3F3A-202ENST00000366814 PDS5BQ9NTI5 1447 aa18.44■□□□□ 0.54
H3F3A-202ENST00000366814 CUX2O14529 1486 aa18.43■□□□□ 0.54
H3F3A-202ENST00000366814 KIF21AQ7Z4S6 1674 aa18.4■□□□□ 0.54
H3F3A-202ENST00000366814 PPP6R1Q9UPN7 881 aa18.34■□□□□ 0.53
H3F3A-202ENST00000366814 THOC2Q8NI27 1593 aaKnown RBP18.33■□□□□ 0.52
H3F3A-202ENST00000366814 ADRA2BP18089 450 aa18.31■□□□□ 0.52
H3F3A-202ENST00000366814 CFTRP13569 1480 aa18.3■□□□□ 0.52
H3F3A-202ENST00000366814 CCDC88BA6NC98 1476 aa18.3■□□□□ 0.52
H3F3A-202ENST00000366814 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
H3F3A-202ENST00000366814 CEP164Q9UPV0 1460 aa18.25■□□□□ 0.51
H3F3A-202ENST00000366814 MRC2Q9UBG0 1479 aa18.24■□□□□ 0.51
H3F3A-202ENST00000366814 PRDM2Q13029 1718 aa18.17■□□□□ 0.5
H3F3A-202ENST00000366814 WDR62O43379 1518 aa18.16■□□□□ 0.5
H3F3A-202ENST00000366814 DNAJC5Q9H3Z4 198 aa18.08■□□□□ 0.49
H3F3A-202ENST00000366814 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
H3F3A-202ENST00000366814 ABCC8Q09428 1581 aa17.95■□□□□ 0.46
H3F3A-202ENST00000366814 TOPBP1Q92547 1522 aa17.94■□□□□ 0.46
H3F3A-202ENST00000366814 DNMBPQ6XZF7 1577 aa17.9■□□□□ 0.46
H3F3A-202ENST00000366814 TRIM41Q8WV44 630 aa17.89■□□□□ 0.45
H3F3A-202ENST00000366814 IFT140Q96RY7 1462 aa17.86■□□□□ 0.45
H3F3A-202ENST00000366814 ZNF608Q9ULD9 1512 aaPredicted RBP17.8■□□□□ 0.44
H3F3A-202ENST00000366814 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
H3F3A-202ENST00000366814 CUX1P39880 1505 aa17.75■□□□□ 0.43
H3F3A-202ENST00000366814 SOGA1O94964 1423 aa17.74■□□□□ 0.43
H3F3A-202ENST00000366814 TARBP1Q13395 1621 aaKnown RBP17.74■□□□□ 0.43
H3F3A-202ENST00000366814 RAD54L2Q9Y4B4 1467 aa17.73■□□□□ 0.43
H3F3A-202ENST00000366814 FGD5Q6ZNL6 1462 aa17.72■□□□□ 0.43
H3F3A-202ENST00000366814 OSCARQ8IYS5 282 aa17.72■□□□□ 0.43
H3F3A-202ENST00000366814 AQRO60306 1485 aaKnown RBP eCLIP17.71■□□□□ 0.433e-10■■■■□ 25
H3F3A-202ENST00000366814 EIF4G3O43432 1585 aaKnown RBP17.71■□□□□ 0.43
H3F3A-202ENST00000366814 TDRD9Q8NDG6 1382 aaKnown RBP17.67■□□□□ 0.42
H3F3A-202ENST00000366814 LOC105371045A0A1W2PR82 267 aa17.61■□□□□ 0.41
H3F3A-202ENST00000366814 FBLN2P98095 1184 aa17.61■□□□□ 0.41
H3F3A-202ENST00000366814 WRNQ14191 1432 aaPredicted RBP eCLIP17.6■□□□□ 0.41
H3F3A-202ENST00000366814 WDR97A6NE52 1622 aa17.57■□□□□ 0.4
H3F3A-202ENST00000366814 TOP2BQ02880 1626 aa17.56■□□□□ 0.4
H3F3A-202ENST00000366814 PIAS4Q8N2W9 510 aaPredicted RBP17.56■□□□□ 0.4
H3F3A-202ENST00000366814 BIVM-ERCC5R4GMW8 1640 aa17.55■□□□□ 0.4
H3F3A-202ENST00000366814 SYNJ1O43426 1573 aa17.54■□□□□ 0.4
H3F3A-202ENST00000366814 CHD1O14646 1710 aa17.54■□□□□ 0.4
H3F3A-202ENST00000366814 FAM9AQ8IZU1 332 aaPredicted RBP17.54■□□□□ 0.4
H3F3A-202ENST00000366814 ABCA10Q8WWZ4 1543 aa17.53■□□□□ 0.4
H3F3A-202ENST00000366814 GRIN2BQ13224 1484 aa17.52■□□□□ 0.4
H3F3A-202ENST00000366814 GAPVD1Q14C86 1478 aa17.52■□□□□ 0.39
H3F3A-202ENST00000366814 SNAPC4Q5SXM2 1469 aa17.52■□□□□ 0.39
H3F3A-202ENST00000366814 CHMP7Q8WUX9 453 aaPredicted RBP17.5■□□□□ 0.39
H3F3A-202ENST00000366814 PBRM1Q86U86 1689 aa17.48■□□□□ 0.39
H3F3A-202ENST00000366814 MAGI1Q96QZ7 1491 aaPredicted RBP17.48■□□□□ 0.39
H3F3A-202ENST00000366814 ABCA5Q8WWZ7 1642 aa17.45■□□□□ 0.38
H3F3A-202ENST00000366814 KCNA4P22459 653 aa17.44■□□□□ 0.38
H3F3A-202ENST00000366814 EEA1Q15075 1411 aa17.43■□□□□ 0.38
H3F3A-202ENST00000366814 SYNJ2O15056 1496 aa17.42■□□□□ 0.38
H3F3A-202ENST00000366814 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.37
H3F3A-202ENST00000366814 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.37
H3F3A-202ENST00000366814 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.37
H3F3A-202ENST00000366814 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
H3F3A-202ENST00000366814 ERICH3Q5RHP9 1530 aa17.32■□□□□ 0.36
H3F3A-202ENST00000366814 ADAMTS12P58397 1594 aa17.3■□□□□ 0.36
H3F3A-202ENST00000366814 CLASP1Q7Z460 1538 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms