RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 CARMIL1Q5VZK9 1371 aa28.08■■■□□ 2.09
TRIM58-201ENST00000366481 KCNH8Q96L42 1107 aa28.07■■■□□ 2.08
TRIM58-201ENST00000366481 HIRIP3Q9BW71 556 aaPredicted RBP28.07■■■□□ 2.08
TRIM58-201ENST00000366481 RRBP1Q9P2E9 1410 aaKnown RBP28.05■■■□□ 2.08
TRIM58-201ENST00000366481 RAB3GAP2Q9H2M9 1393 aa28.04■■■□□ 2.08
TRIM58-201ENST00000366481 CADPSQ9ULU8 1353 aa28■■■□□ 2.07
TRIM58-201ENST00000366481 NEFLP07196 543 aa27.99■■■□□ 2.07
TRIM58-201ENST00000366481 FGD5Q6ZNL6 1462 aa27.98■■■□□ 2.07
TRIM58-201ENST00000366481 PHLDB1Q86UU1 1377 aa27.95■■■□□ 2.06
TRIM58-201ENST00000366481 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
TRIM58-201ENST00000366481 DDX10Q13206 875 aaKnown RBP27.9■■■□□ 2.06
TRIM58-201ENST00000366481 FHOD3Q2V2M9 1422 aa27.88■■■□□ 2.05
TRIM58-201ENST00000366481 RBM19Q9Y4C8 960 aaKnown RBP27.84■■■□□ 2.05
TRIM58-201ENST00000366481 ERICH6Q7L0X2 663 aa27.8■■■□□ 2.04
TRIM58-201ENST00000366481 NESP48681 1621 aa27.8■■■□□ 2.04
TRIM58-201ENST00000366481 SETD5Q9C0A6 1442 aa27.78■■■□□ 2.04
TRIM58-201ENST00000366481 CC2D2AQ9P2K1 1620 aa27.78■■■□□ 2.04
TRIM58-201ENST00000366481 LRRC9Q6ZRR7 1453 aa27.78■■■□□ 2.04
TRIM58-201ENST00000366481 TIAM1Q13009 1591 aa27.76■■■□□ 2.03
TRIM58-201ENST00000366481 FANCD2Q9BXW9 1451 aa27.76■■■□□ 2.03
TRIM58-201ENST00000366481 TRIM52Q96A61 297 aa27.75■■■□□ 2.03
TRIM58-201ENST00000366481 ARID3CA6NKF2 412 aa27.74■■■□□ 2.03
TRIM58-201ENST00000366481 MAPKBP1O60336 1514 aa27.73■■■□□ 2.03
TRIM58-201ENST00000366481 TDRD9Q8NDG6 1382 aaKnown RBP27.67■■■□□ 2.02
TRIM58-201ENST00000366481 FHAD1B1AJZ9 1412 aa27.63■■■□□ 2.01
TRIM58-201ENST00000366481 PCF11O94913 1555 aaKnown RBP27.63■■■□□ 2.01
TRIM58-201ENST00000366481 WDR97A6NE52 1622 aa27.62■■■□□ 2.01
TRIM58-201ENST00000366481 POLA1P09884 1462 aaPredicted RBP27.59■■■□□ 2.01
TRIM58-201ENST00000366481 CHIC2Q9UKJ5 165 aa27.58■■■□□ 2.01
TRIM58-201ENST00000366481 MTUS2Q5JR59 1369 aa27.54■■■□□ 2
TRIM58-201ENST00000366481 TOPBP1Q92547 1522 aa27.52■■■□□ 2
TRIM58-201ENST00000366481 PPP1R15AO75807 674 aaPredicted RBP27.5■■□□□ 1.99
TRIM58-201ENST00000366481 RRP7BPQ9NSQ0 103 aa27.5■■□□□ 1.99
TRIM58-201ENST00000366481 IRX6P78412 446 aaPredicted RBP27.49■■□□□ 1.99
TRIM58-201ENST00000366481 ANP32CO43423 234 aa27.46■■□□□ 1.99
TRIM58-201ENST00000366481 MSH5O43196 834 aa27.44■■□□□ 1.98
TRIM58-201ENST00000366481 CDK11AQ9UQ88 783 aaPredicted RBP27.44■■□□□ 1.98
TRIM58-201ENST00000366481 TONSLQ96HA7 1378 aa27.43■■□□□ 1.98
TRIM58-201ENST00000366481 MAP3K1Q13233 1512 aa27.43■■□□□ 1.98
TRIM58-201ENST00000366481 PRDM2Q13029 1718 aa27.43■■□□□ 1.98
TRIM58-201ENST00000366481 PTPRKQ15262 1439 aa27.42■■□□□ 1.98
TRIM58-201ENST00000366481 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
TRIM58-201ENST00000366481 CASKIN1Q8WXD9 1431 aa27.4■■□□□ 1.98
TRIM58-201ENST00000366481 FGD6Q6ZV73 1430 aa27.38■■□□□ 1.97
TRIM58-201ENST00000366481 DNMBPQ6XZF7 1577 aa27.38■■□□□ 1.97
TRIM58-201ENST00000366481 FYCO1Q9BQS8 1478 aa27.35■■□□□ 1.97
TRIM58-201ENST00000366481 FOXD1Q16676 465 aa27.34■■□□□ 1.97
TRIM58-201ENST00000366481 FBLN2P98095 1184 aa27.33■■□□□ 1.97
TRIM58-201ENST00000366481 URB2Q14146 1524 aaKnown RBP27.32■■□□□ 1.96
TRIM58-201ENST00000366481 FMN1Q68DA7 1419 aa27.31■■□□□ 1.96
TRIM58-201ENST00000366481 CCDC18Q5T9S5 1454 aa27.3■■□□□ 1.96
TRIM58-201ENST00000366481 CFAP43Q8NDM7 1665 aa27.3■■□□□ 1.96
TRIM58-201ENST00000366481 HNRNPUQ00839 825 aaKnown RBP eCLIP27.26■■□□□ 1.95
TRIM58-201ENST00000366481 CNGB1Q14028 1251 aaPredicted RBP27.26■■□□□ 1.95
TRIM58-201ENST00000366481 AQRO60306 1485 aaKnown RBP eCLIP27.25■■□□□ 1.951e-6■■■■□ 20.1
TRIM58-201ENST00000366481 GAPVD1Q14C86 1478 aa27.24■■□□□ 1.95
TRIM58-201ENST00000366481 NCOA2Q15596 1464 aa27.23■■□□□ 1.95
TRIM58-201ENST00000366481 SNAPC4Q5SXM2 1469 aa27.23■■□□□ 1.95
TRIM58-201ENST00000366481 EFCAB5A4FU69 1503 aa27.2■■□□□ 1.95
TRIM58-201ENST00000366481 TIMELESSQ9UNS1 1208 aa27.19■■□□□ 1.94
TRIM58-201ENST00000366481 NAIPQ13075 1403 aa27.17■■□□□ 1.94
TRIM58-201ENST00000366481 NBR1Q14596 966 aa27.15■■□□□ 1.94
TRIM58-201ENST00000366481 MYOM3Q5VTT5 1437 aa27.15■■□□□ 1.94
TRIM58-201ENST00000366481 CCER2I3L3R5 266 aa27.14■■□□□ 1.94
TRIM58-201ENST00000366481 DEKP35659 375 aaKnown RBP27.14■■□□□ 1.94
TRIM58-201ENST00000366481 HFM1A2PYH4 1435 aa27.13■■□□□ 1.93
TRIM58-201ENST00000366481 UACAQ9BZF9 1416 aa27.13■■□□□ 1.93
TRIM58-201ENST00000366481 FANCIQ9NVI1 1328 aa27.12■■□□□ 1.93
TRIM58-201ENST00000366481 HSPA5P11021 654 aaKnown RBP27.11■■□□□ 1.93
TRIM58-201ENST00000366481 CUL7Q14999 1698 aa27.1■■□□□ 1.93
TRIM58-201ENST00000366481 CTTNBP2Q8WZ74 1663 aa27.09■■□□□ 1.93
TRIM58-201ENST00000366481 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.08■■□□□ 1.932e-6■■■■■ 32.8
TRIM58-201ENST00000366481 PDS5BQ9NTI5 1447 aa27.07■■□□□ 1.92
TRIM58-201ENST00000366481 ZNF644Q9H582 1327 aaPredicted RBP27.06■■□□□ 1.92
TRIM58-201ENST00000366481 PTPN23Q9H3S7 1636 aa27.06■■□□□ 1.92
TRIM58-201ENST00000366481 MAGI3Q5TCQ9 1506 aa27.05■■□□□ 1.92
TRIM58-201ENST00000366481 GRIN2BQ13224 1484 aa27.05■■□□□ 1.92
TRIM58-201ENST00000366481 CCDC184Q52MB2 194 aa27.03■■□□□ 1.92
TRIM58-201ENST00000366481 L3MBTL2Q969R5 705 aa27.03■■□□□ 1.92
TRIM58-201ENST00000366481 SENP3-EIF4A1A0A087X0R7 540 aa27.03■■□□□ 1.92
TRIM58-201ENST00000366481 MPHOSPH9Q99550 1183 aa27.03■■□□□ 1.92
TRIM58-201ENST00000366481 WASHC2AQ641Q2 1341 aa27.02■■□□□ 1.92
TRIM58-201ENST00000366481 LRRIQ1Q96JM4 1722 aa27.02■■□□□ 1.92
TRIM58-201ENST00000366481 CDK13Q14004 1512 aaKnown RBP27.01■■□□□ 1.91
TRIM58-201ENST00000366481 POLR3GLQ9BT43 218 aa27.01■■□□□ 1.91
TRIM58-201ENST00000366481 PRKCSHP14314 528 aaPredicted RBP26.98■■□□□ 1.91
TRIM58-201ENST00000366481 C11orf95C9JLR9 678 aaPredicted RBP26.98■■□□□ 1.91
TRIM58-201ENST00000366481 B4GALNT3Q6L9W6 998 aa26.98■■□□□ 1.91
TRIM58-201ENST00000366481 ZNF326Q5BKZ1 582 aaKnown RBP26.97■■□□□ 1.91
TRIM58-201ENST00000366481 MYT1LQ9UL68 1186 aa26.97■■□□□ 1.91
TRIM58-201ENST00000366481 ZNF777Q9ULD5 760 aaPredicted RBP26.97■■□□□ 1.91
TRIM58-201ENST00000366481 FAM9BQ8IZU0 186 aa26.95■■□□□ 1.9
TRIM58-201ENST00000366481 EIF4G2P78344 907 aaKnown RBP eCLIP26.94■■□□□ 1.9
TRIM58-201ENST00000366481 ABCA5Q8WWZ7 1642 aa26.94■■□□□ 1.9
TRIM58-201ENST00000366481 SAMD9Q5K651 1589 aa26.93■■□□□ 1.9
TRIM58-201ENST00000366481 LAMC3Q9Y6N6 1575 aa26.93■■□□□ 1.9
TRIM58-201ENST00000366481 KDM6BO15054 1643 aa26.91■■□□□ 1.9
TRIM58-201ENST00000366481 PPP4R2Q9NY27 417 aa26.91■■□□□ 1.9
TRIM58-201ENST00000366481 SUPT6HQ7KZ85 1726 aaKnown RBP26.9■■□□□ 1.9
TRIM58-201ENST00000366481 SLC4A1APQ9BWU0 796 aaKnown RBP26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms