RNA–Protein interactions for RNA: ENST00000361059.7

MATR3-229, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MATR3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-229ENST00000361059 MRC2Q9UBG0 1479 aa12.07□□□□□ -0.48
MATR3-229ENST00000361059 KIF21AQ7Z4S6 1674 aa12.07□□□□□ -0.48
MATR3-229ENST00000361059 CCNB3Q8WWL7 1395 aa12.05□□□□□ -0.48
MATR3-229ENST00000361059 FBLN2P98095 1184 aa12.05□□□□□ -0.48
MATR3-229ENST00000361059 AQRO60306 1485 aaKnown RBP eCLIP12.03□□□□□ -0.482e-7■■■■□ 23.3
MATR3-229ENST00000361059 FMN1Q68DA7 1419 aa12.03□□□□□ -0.48
MATR3-229ENST00000361059 MTUS2Q5JR59 1369 aa12.02□□□□□ -0.49
MATR3-229ENST00000361059 EFCAB5A4FU69 1503 aa12□□□□□ -0.49
MATR3-229ENST00000361059 CHMP7Q8WUX9 453 aaPredicted RBP11.99□□□□□ -0.49
MATR3-229ENST00000361059 DIEXFQ68CQ4 756 aaKnown RBP11.98□□□□□ -0.49
MATR3-229ENST00000361059 ARID3CA6NKF2 412 aa11.98□□□□□ -0.49
MATR3-229ENST00000361059 TIAM1Q13009 1591 aa11.98□□□□□ -0.49
MATR3-229ENST00000361059 GRIN2BQ13224 1484 aa11.97□□□□□ -0.49
MATR3-229ENST00000361059 LRRC9Q6ZRR7 1453 aa11.97□□□□□ -0.49
MATR3-229ENST00000361059 IFT140Q96RY7 1462 aa11.97□□□□□ -0.49
MATR3-229ENST00000361059 RRBP1Q9P2E9 1410 aaKnown RBP11.97□□□□□ -0.49
MATR3-229ENST00000361059 ABCA5Q8WWZ7 1642 aa11.96□□□□□ -0.49
MATR3-229ENST00000361059 ZNF316A6NFI3 1004 aaPredicted RBP11.96□□□□□ -0.49
MATR3-229ENST00000361059 CASKIN1Q8WXD9 1431 aa11.96□□□□□ -0.5
MATR3-229ENST00000361059 MAP3K1Q13233 1512 aa11.95□□□□□ -0.5
MATR3-229ENST00000361059 CTTNBP2Q8WZ74 1663 aa11.95□□□□□ -0.5
MATR3-229ENST00000361059 FYCO1Q9BQS8 1478 aa11.94□□□□□ -0.5
MATR3-229ENST00000361059 WDR97A6NE52 1622 aa11.94□□□□□ -0.5
MATR3-229ENST00000361059 PCF11O94913 1555 aaKnown RBP11.93□□□□□ -0.5
MATR3-229ENST00000361059 CLSPNQ9HAW4 1339 aa11.93□□□□□ -0.5
MATR3-229ENST00000361059 TARBP1Q13395 1621 aaKnown RBP11.93□□□□□ -0.5
MATR3-229ENST00000361059 PHLDB1Q86UU1 1377 aa11.92□□□□□ -0.5
MATR3-229ENST00000361059 ZNF608Q9ULD9 1512 aaPredicted RBP11.91□□□□□ -0.5
MATR3-229ENST00000361059 CDK11AQ9UQ88 783 aaPredicted RBP11.89□□□□□ -0.51
MATR3-229ENST00000361059 DHX57Q6P158 1386 aaKnown RBP11.88□□□□□ -0.51
MATR3-229ENST00000361059 WDR62O43379 1518 aa11.87□□□□□ -0.51
MATR3-229ENST00000361059 RAB3GAP2Q9H2M9 1393 aa11.87□□□□□ -0.51
MATR3-229ENST00000361059 SETD5Q9C0A6 1442 aa11.87□□□□□ -0.51
MATR3-229ENST00000361059 SNAPC4Q5SXM2 1469 aa11.87□□□□□ -0.51
MATR3-229ENST00000361059 PBRM1Q86U86 1689 aa11.87□□□□□ -0.51
MATR3-229ENST00000361059 NEUROD1Q13562 356 aa11.86□□□□□ -0.51
MATR3-229ENST00000361059 IQGAP2Q13576 1575 aa11.86□□□□□ -0.51
MATR3-229ENST00000361059 ADAMTS12P58397 1594 aa11.85□□□□□ -0.51
MATR3-229ENST00000361059 CFAP43Q8NDM7 1665 aa11.83□□□□□ -0.52
MATR3-229ENST00000361059 KIAA0586Q9BVV6 1533 aa11.82□□□□□ -0.52
MATR3-229ENST00000361059 FGD6Q6ZV73 1430 aa11.82□□□□□ -0.52
MATR3-229ENST00000361059 CHIC2Q9UKJ5 165 aa11.81□□□□□ -0.52
MATR3-229ENST00000361059 SAMD9Q5K651 1589 aa11.81□□□□□ -0.52
MATR3-229ENST00000361059 CCDC18Q5T9S5 1454 aa11.81□□□□□ -0.52
MATR3-229ENST00000361059 JPH4Q96JJ6 628 aa11.81□□□□□ -0.52
MATR3-229ENST00000361059 TRIM52Q96A61 297 aa11.8□□□□□ -0.52
MATR3-229ENST00000361059 GRIN2AQ12879 1464 aa11.8□□□□□ -0.52
MATR3-229ENST00000361059 CARMIL2Q6F5E8 1435 aa11.8□□□□□ -0.52
MATR3-229ENST00000361059 CENPBP07199 599 aaPredicted RBP11.8□□□□□ -0.52
MATR3-229ENST00000361059 NCOA2Q15596 1464 aa11.79□□□□□ -0.52
MATR3-229ENST00000361059 MAGI1Q96QZ7 1491 aaPredicted RBP11.79□□□□□ -0.52
MATR3-229ENST00000361059 MYOM3Q5VTT5 1437 aa11.78□□□□□ -0.52
MATR3-229ENST00000361059 EIF4G3O43432 1585 aaKnown RBP11.78□□□□□ -0.52
MATR3-229ENST00000361059 RRP7BPQ9NSQ0 103 aa11.78□□□□□ -0.52
MATR3-229ENST00000361059 HECW1Q76N89 1606 aa11.77□□□□□ -0.52
MATR3-229ENST00000361059 EHBP1L1Q8N3D4 1523 aa11.77□□□□□ -0.53
MATR3-229ENST00000361059 SYNJ2O15056 1496 aa11.77□□□□□ -0.53
MATR3-229ENST00000361059 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.76□□□□□ -0.535e-19■■□□□ 13.5
MATR3-229ENST00000361059 ZNF777Q9ULD5 760 aaPredicted RBP11.76□□□□□ -0.53
MATR3-229ENST00000361059 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
MATR3-229ENST00000361059 SIN3AQ96ST3 1273 aa11.75□□□□□ -0.53
MATR3-229ENST00000361059 EPRSP07814 1512 aaKnown RBP11.75□□□□□ -0.53
MATR3-229ENST00000361059 SUPT6HQ7KZ85 1726 aaKnown RBP11.75□□□□□ -0.53
MATR3-229ENST00000361059 UGGT2Q9NYU1 1516 aa11.74□□□□□ -0.53
MATR3-229ENST00000361059 YTHDC1Q96MU7 727 aaKnown RBP11.74□□□□□ -0.53
MATR3-229ENST00000361059 PLEKHD1A6NEE1 506 aa11.74□□□□□ -0.53
MATR3-229ENST00000361059 CDK13Q14004 1512 aaKnown RBP11.73□□□□□ -0.53
MATR3-229ENST00000361059 CFDP1Q9UEE9 299 aaPredicted RBP11.72□□□□□ -0.53
MATR3-229ENST00000361059 TONSLQ96HA7 1378 aa11.71□□□□□ -0.54
MATR3-229ENST00000361059 MIER1Q8N108 512 aa11.69□□□□□ -0.54
MATR3-229ENST00000361059 KIAA0556O60303 1618 aa11.69□□□□□ -0.54
MATR3-229ENST00000361059 TIMELESSQ9UNS1 1208 aa11.68□□□□□ -0.54
MATR3-229ENST00000361059 DISP1Q96F81 1524 aa11.68□□□□□ -0.54
MATR3-229ENST00000361059 MIA2Q96PC5 1412 aa11.66□□□□□ -0.54
MATR3-229ENST00000361059 PTPN23Q9H3S7 1636 aa11.66□□□□□ -0.54
MATR3-229ENST00000361059 HFM1A2PYH4 1435 aa11.66□□□□□ -0.54
MATR3-229ENST00000361059 PTPRGP23470 1445 aa11.65□□□□□ -0.55
MATR3-229ENST00000361059 PLB1Q6P1J6 1458 aa11.65□□□□□ -0.55
MATR3-229ENST00000361059 CEP170Q5SW79 1584 aa11.64□□□□□ -0.55
MATR3-229ENST00000361059 NUP160Q12769 1436 aa11.64□□□□□ -0.55
MATR3-229ENST00000361059 RAPGEF6Q8TEU7 1601 aa11.64□□□□□ -0.55
MATR3-229ENST00000361059 MAGI3Q5TCQ9 1506 aa11.64□□□□□ -0.55
MATR3-229ENST00000361059 NUP153P49790 1475 aaKnown RBP11.63□□□□□ -0.55
MATR3-229ENST00000361059 PTPRKQ15262 1439 aa11.63□□□□□ -0.55
MATR3-229ENST00000361059 UACAQ9BZF9 1416 aa11.63□□□□□ -0.55
MATR3-229ENST00000361059 ZNF644Q9H582 1327 aaPredicted RBP11.63□□□□□ -0.55
MATR3-229ENST00000361059 ACIN1Q9UKV3 1341 aaKnown RBP11.63□□□□□ -0.55
MATR3-229ENST00000361059 PRG4Q92954 1404 aaPredicted RBP11.63□□□□□ -0.55
MATR3-229ENST00000361059 TROQ12816 1431 aaPredicted RBP11.63□□□□□ -0.55
MATR3-229ENST00000361059 NAIPQ13075 1403 aa11.62□□□□□ -0.55
MATR3-229ENST00000361059 LRRIQ1Q96JM4 1722 aa11.62□□□□□ -0.55
MATR3-229ENST00000361059 TSPY4P0CV99 314 aa11.62□□□□□ -0.55
MATR3-229ENST00000361059 TSPY10P0CW01 314 aa11.62□□□□□ -0.55
MATR3-229ENST00000361059 MAPKBP1O60336 1514 aa11.61□□□□□ -0.55
MATR3-229ENST00000361059 PPP1R15AO75807 674 aaPredicted RBP11.61□□□□□ -0.55
MATR3-229ENST00000361059 SLC4A1APQ9BWU0 796 aaKnown RBP11.6□□□□□ -0.55
MATR3-229ENST00000361059 MPHOSPH9Q99550 1183 aa11.59□□□□□ -0.55
MATR3-229ENST00000361059 HIRIP3Q9BW71 556 aaPredicted RBP11.58□□□□□ -0.56
MATR3-229ENST00000361059 TCOF1Q13428 1488 aaKnown RBP11.58□□□□□ -0.56
MATR3-229ENST00000361059 DDX10Q13206 875 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms