RNA–Protein interactions for RNA: ENST00000359726.7

APP-206, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 3,294 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-206ENST00000359726 RAB3GAP2Q9H2M9 1393 aa10.64□□□□□ -0.71
APP-206ENST00000359726 CCNB3Q8WWL7 1395 aa10.63□□□□□ -0.71
APP-206ENST00000359726 ANO8Q9HCE9 1232 aaPredicted RBP10.62□□□□□ -0.71
APP-206ENST00000359726 NCAPD3P42695 1498 aa10.62□□□□□ -0.71
APP-206ENST00000359726 CFAP43Q8NDM7 1665 aa10.61□□□□□ -0.71
APP-206ENST00000359726 TIAM1Q13009 1591 aa10.61□□□□□ -0.71
APP-206ENST00000359726 ARHGAP35Q9NRY4 1499 aa10.59□□□□□ -0.71
APP-206ENST00000359726 ERICH6BQ5W0A0 696 aa10.59□□□□□ -0.71
APP-206ENST00000359726 DDX10Q13206 875 aaKnown RBP10.57□□□□□ -0.72
APP-206ENST00000359726 NEFLP07196 543 aa10.56□□□□□ -0.72
APP-206ENST00000359726 TRIM52Q96A61 297 aa10.56□□□□□ -0.72
APP-206ENST00000359726 SETD5Q9C0A6 1442 aa10.56□□□□□ -0.72
APP-206ENST00000359726 POLR1AO95602 1720 aaPredicted RBP10.55□□□□□ -0.72
APP-206ENST00000359726 TIMELESSQ9UNS1 1208 aa10.55□□□□□ -0.72
APP-206ENST00000359726 NCOA2Q15596 1464 aa10.53□□□□□ -0.72
APP-206ENST00000359726 SALL2Q9Y467 1007 aaPredicted RBP10.53□□□□□ -0.72
APP-206ENST00000359726 BICRAQ9NZM4 1560 aa10.52□□□□□ -0.72
APP-206ENST00000359726 PAK3O75914 559 aaPredicted RBP10.52□□□□□ -0.73
APP-206ENST00000359726 CDK11AQ9UQ88 783 aaPredicted RBP10.52□□□□□ -0.73
APP-206ENST00000359726 ABCA5Q8WWZ7 1642 aa10.5□□□□□ -0.73
APP-206ENST00000359726 WASHC2AQ641Q2 1341 aa10.49□□□□□ -0.73
APP-206ENST00000359726 LRRC9Q6ZRR7 1453 aa10.49□□□□□ -0.73
APP-206ENST00000359726 PPP4R2Q9NY27 417 aa10.48□□□□□ -0.73
APP-206ENST00000359726 SIN3AQ96ST3 1273 aa10.48□□□□□ -0.73
APP-206ENST00000359726 NOP58Q9Y2X3 529 aaKnown RBP10.48□□□□□ -0.73
APP-206ENST00000359726 UBE2Q2Q8WVN8 375 aa10.47□□□□□ -0.73
APP-206ENST00000359726 FHAD1B1AJZ9 1412 aa10.47□□□□□ -0.73
APP-206ENST00000359726 PHLDB1Q86UU1 1377 aa10.47□□□□□ -0.73
APP-206ENST00000359726 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.46□□□□□ -0.74
APP-206ENST00000359726 ANP32CO43423 234 aa10.46□□□□□ -0.74
APP-206ENST00000359726 CUX1P39880 1505 aa10.45□□□□□ -0.74
APP-206ENST00000359726 RNF123Q5XPI4 1314 aa10.44□□□□□ -0.74
APP-206ENST00000359726 IRX6P78412 446 aaPredicted RBP10.43□□□□□ -0.74
APP-206ENST00000359726 IL27Q8NEV9 243 aa10.43□□□□□ -0.74
APP-206ENST00000359726 PCF11O94913 1555 aaKnown RBP10.43□□□□□ -0.74
APP-206ENST00000359726 PTPN23Q9H3S7 1636 aa10.42□□□□□ -0.74
APP-206ENST00000359726 C11orf95C9JLR9 678 aaPredicted RBP10.42□□□□□ -0.74
APP-206ENST00000359726 ATAD2BQ9ULI0 1458 aa10.42□□□□□ -0.74
APP-206ENST00000359726 WASHC2CQ9Y4E1 1318 aa10.42□□□□□ -0.74
APP-206ENST00000359726 DENND4BO75064 1496 aaPredicted RBP10.42□□□□□ -0.74
APP-206ENST00000359726 PRDM2Q13029 1718 aa10.41□□□□□ -0.74
APP-206ENST00000359726 LRRIQ1Q96JM4 1722 aa10.41□□□□□ -0.74
APP-206ENST00000359726 HIRIP3Q9BW71 556 aaPredicted RBP10.39□□□□□ -0.75
APP-206ENST00000359726 HECW1Q76N89 1606 aa10.39□□□□□ -0.75
APP-206ENST00000359726 IPO9Q96P70 1041 aaKnown RBP10.38□□□□□ -0.75
APP-206ENST00000359726 CCDC184Q52MB2 194 aa10.38□□□□□ -0.75
APP-206ENST00000359726 CNTLNQ9NXG0 1405 aa10.37□□□□□ -0.75
APP-206ENST00000359726 ZBED9Q6R2W3 1325 aa10.37□□□□□ -0.75
APP-206ENST00000359726 GCC2Q8IWJ2 1684 aa10.37□□□□□ -0.75
APP-206ENST00000359726 HNRNPUQ00839 825 aaKnown RBP eCLIP10.37□□□□□ -0.75
APP-206ENST00000359726 B4GALNT3Q6L9W6 998 aa10.36□□□□□ -0.75
APP-206ENST00000359726 SMG6Q86US8 1419 aaKnown RBP10.36□□□□□ -0.75
APP-206ENST00000359726 UACAQ9BZF9 1416 aa10.36□□□□□ -0.75
APP-206ENST00000359726 NBR1Q14596 966 aa10.36□□□□□ -0.75
APP-206ENST00000359726 AQRO60306 1485 aaKnown RBP eCLIP10.35□□□□□ -0.75
APP-206ENST00000359726 HFM1A2PYH4 1435 aa10.35□□□□□ -0.75
APP-206ENST00000359726 PTPRKQ15262 1439 aa10.35□□□□□ -0.75
APP-206ENST00000359726 NCOA1Q15788 1441 aa10.35□□□□□ -0.75
APP-206ENST00000359726 CCDC18Q5T9S5 1454 aa10.34□□□□□ -0.75
APP-206ENST00000359726 CCDC136Q96JN2 1154 aa10.34□□□□□ -0.75
APP-206ENST00000359726 KIF27Q86VH2 1401 aa10.33□□□□□ -0.76
APP-206ENST00000359726 CC2D2AQ9P2K1 1620 aa10.31□□□□□ -0.76
APP-206ENST00000359726 FYCO1Q9BQS8 1478 aa10.31□□□□□ -0.76
APP-206ENST00000359726 AKNAQ7Z591 1439 aa10.31□□□□□ -0.76
APP-206ENST00000359726 RANGAP1P46060 587 aaPredicted RBP10.31□□□□□ -0.76
APP-206ENST00000359726 SPATA31E1Q6ZUB1 1445 aa10.3□□□□□ -0.76
APP-206ENST00000359726 NAIPQ13075 1403 aa10.29□□□□□ -0.76
APP-206ENST00000359726 KDM6BO15054 1643 aa10.28□□□□□ -0.76
APP-206ENST00000359726 USP35Q9P2H5 1018 aa10.28□□□□□ -0.76
APP-206ENST00000359726 ARHGEF11O15085 1522 aa10.28□□□□□ -0.76
APP-206ENST00000359726 PRKRIP1Q9H875 184 aaPredicted RBP10.27□□□□□ -0.76
APP-206ENST00000359726 FGD6Q6ZV73 1430 aa10.27□□□□□ -0.77
APP-206ENST00000359726 SNAPC4Q5SXM2 1469 aa10.26□□□□□ -0.77
APP-206ENST00000359726 TONSLQ96HA7 1378 aa10.26□□□□□ -0.77
APP-206ENST00000359726 CTTNBP2Q8WZ74 1663 aa10.26□□□□□ -0.77
APP-206ENST00000359726 BCORL1Q5H9F3 1711 aa10.26□□□□□ -0.77
APP-206ENST00000359726 FGD5Q6ZNL6 1462 aa10.26□□□□□ -0.77
APP-206ENST00000359726 IGF1RP08069 1367 aa10.25□□□□□ -0.77
APP-206ENST00000359726 CCDC7Q96M83 1385 aa10.25□□□□□ -0.77
APP-206ENST00000359726 EFCAB5A4FU69 1503 aa10.25□□□□□ -0.77
APP-206ENST00000359726 CASKIN1Q8WXD9 1431 aa10.25□□□□□ -0.77
APP-206ENST00000359726 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.25□□□□□ -0.77
APP-206ENST00000359726 DHX29Q7Z478 1369 aaKnown RBP10.24□□□□□ -0.77
APP-206ENST00000359726 HMGXB3Q12766 1538 aa10.24□□□□□ -0.77
APP-206ENST00000359726 E9PCH4 1651 aa10.24□□□□□ -0.77
APP-206ENST00000359726 HSPA5P11021 654 aaKnown RBP10.24□□□□□ -0.77
APP-206ENST00000359726 TEX14Q8IWB6 1497 aa10.23□□□□□ -0.77
APP-206ENST00000359726 VIRMAQ69YN4 1812 aaKnown RBP10.23□□□□□ -0.77
APP-206ENST00000359726 ZBTB47Q9UFB7 747 aaPredicted RBP10.22□□□□□ -0.77
APP-206ENST00000359726 RTN4Q9NQC3 1192 aaKnown RBP10.22□□□□□ -0.77
APP-206ENST00000359726 ANP32AP39687 249 aaKnown RBP10.22□□□□□ -0.77
APP-206ENST00000359726 CFTRP13569 1480 aa10.21□□□□□ -0.77
APP-206ENST00000359726 SAMD9Q5K651 1589 aa10.2□□□□□ -0.78
APP-206ENST00000359726 TCOF1Q13428 1488 aaKnown RBP10.2□□□□□ -0.78
APP-206ENST00000359726 DNAJC5Q9H3Z4 198 aa10.2□□□□□ -0.78
APP-206ENST00000359726 RTL5Q5HYW3 569 aaPredicted RBP10.19□□□□□ -0.78
APP-206ENST00000359726 NUDCQ9Y266 331 aa10.19□□□□□ -0.78
APP-206ENST00000359726 MBD5Q9P267 1494 aa10.19□□□□□ -0.78
APP-206ENST00000359726 THOC2Q8NI27 1593 aaKnown RBP10.19□□□□□ -0.78
APP-206ENST00000359726 BRPF3Q9ULD4 1205 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms