RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 BCANQ96GW7 911 aa34.58■■■■□ 3.13
DDX42-201ENST00000359353 PHLDB1Q86UU1 1377 aa34.57■■■■□ 3.12
DDX42-201ENST00000359353 TIAM1Q13009 1591 aa34.55■■■■□ 3.12
DDX42-201ENST00000359353 CARMIL1Q5VZK9 1371 aa34.51■■■■□ 3.11
DDX42-201ENST00000359353 SETD5Q9C0A6 1442 aa34.5■■■■□ 3.11
DDX42-201ENST00000359353 WDR97A6NE52 1622 aa34.49■■■■□ 3.11
DDX42-201ENST00000359353 TSHZ2Q9NRE2 1034 aa34.47■■■■□ 3.11
DDX42-201ENST00000359353 LRRC9Q6ZRR7 1453 aa34.46■■■■□ 3.11
DDX42-201ENST00000359353 FGD5Q6ZNL6 1462 aa34.41■■■■□ 3.1
DDX42-201ENST00000359353 FKBP8Q14318 412 aa34.31■■■■□ 3.08
DDX42-201ENST00000359353 FHOD3Q2V2M9 1422 aa34.31■■■■□ 3.08
DDX42-201ENST00000359353 PCF11O94913 1555 aaKnown RBP34.31■■■■□ 3.08
DDX42-201ENST00000359353 TRIM52Q96A61 297 aa34.27■■■■□ 3.08
DDX42-201ENST00000359353 CC2D2AQ9P2K1 1620 aa34.27■■■■□ 3.08
DDX42-201ENST00000359353 CADPSQ9ULU8 1353 aa34.26■■■■□ 3.08
DDX42-201ENST00000359353 MAP3K1Q13233 1512 aa34.25■■■■□ 3.07
DDX42-201ENST00000359353 PRDM2Q13029 1718 aa34.24■■■■□ 3.07
DDX42-201ENST00000359353 PPP1R15AO75807 674 aaPredicted RBP34.22■■■■□ 3.07
DDX42-201ENST00000359353 FHAD1B1AJZ9 1412 aa34.21■■■■□ 3.07
DDX42-201ENST00000359353 RAD54L2Q9Y4B4 1467 aa34.16■■■■□ 3.06
DDX42-201ENST00000359353 CFAP43Q8NDM7 1665 aa34.14■■■■□ 3.06
DDX42-201ENST00000359353 ANP32CO43423 234 aa34.06■■■■□ 3.04
DDX42-201ENST00000359353 FANCD2Q9BXW9 1451 aa34.01■■■■□ 3.03
DDX42-201ENST00000359353 TONSLQ96HA7 1378 aa34■■■■□ 3.03
DDX42-201ENST00000359353 NEFLP07196 543 aa33.95■■■■□ 3.03
DDX42-201ENST00000359353 FYCO1Q9BQS8 1478 aa33.95■■■■□ 3.03
DDX42-201ENST00000359353 PTPRKQ15262 1439 aa33.94■■■■□ 3.02
DDX42-201ENST00000359353 CASKIN1Q8WXD9 1431 aa33.93■■■■□ 3.02
DDX42-201ENST00000359353 TIMELESSQ9UNS1 1208 aa33.93■■■■□ 3.02
DDX42-201ENST00000359353 FGD6Q6ZV73 1430 aa33.92■■■■□ 3.02
DDX42-201ENST00000359353 ANP32EQ9BTT0 268 aa33.91■■■■□ 3.02
DDX42-201ENST00000359353 CCDC18Q5T9S5 1454 aa33.91■■■■□ 3.02
DDX42-201ENST00000359353 MTUS2Q5JR59 1369 aa33.9■■■■□ 3.02
DDX42-201ENST00000359353 POLA1P09884 1462 aaPredicted RBP33.89■■■■□ 3.02
DDX42-201ENST00000359353 NESP48681 1621 aa33.87■■■■□ 3.01
DDX42-201ENST00000359353 CCER2I3L3R5 266 aa33.87■■■■□ 3.01
DDX42-201ENST00000359353 TOPBP1Q92547 1522 aa33.81■■■■□ 3
DDX42-201ENST00000359353 ABCA10Q8WWZ4 1543 aa33.8■■■■□ 3
DDX42-201ENST00000359353 IRX6P78412 446 aaPredicted RBP33.8■■■■□ 3
DDX42-201ENST00000359353 CHIC2Q9UKJ5 165 aa33.8■■■■□ 3
DDX42-201ENST00000359353 EFCAB5A4FU69 1503 aa33.79■■■■□ 3
DDX42-201ENST00000359353 DNAJC5BQ9UF47 199 aa33.78■■■■□ 3
DDX42-201ENST00000359353 AQRO60306 1485 aaKnown RBP eCLIP33.78■■■■□ 38e-7■■■■□ 26.5
DDX42-201ENST00000359353 DNMBPQ6XZF7 1577 aa33.77■■■■□ 3
DDX42-201ENST00000359353 RRP7BPQ9NSQ0 103 aa33.77■■■■□ 3
DDX42-201ENST00000359353 RBM19Q9Y4C8 960 aaKnown RBP33.76■■■■□ 3
DDX42-201ENST00000359353 CTTNBP2Q8WZ74 1663 aa33.76■■■□□ 2.99
DDX42-201ENST00000359353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.75■■■□□ 2.995e-11■□□□□ 10.2
DDX42-201ENST00000359353 SNAPC4Q5SXM2 1469 aa33.75■■■□□ 2.99
DDX42-201ENST00000359353 FMN1Q68DA7 1419 aa33.74■■■□□ 2.99
DDX42-201ENST00000359353 TDRD9Q8NDG6 1382 aaKnown RBP33.74■■■□□ 2.99
DDX42-201ENST00000359353 UACAQ9BZF9 1416 aa33.73■■■□□ 2.99
DDX42-201ENST00000359353 PTPN23Q9H3S7 1636 aa33.73■■■□□ 2.99
DDX42-201ENST00000359353 HNRNPUQ00839 825 aaKnown RBP eCLIP33.72■■■□□ 2.99
DDX42-201ENST00000359353 HFM1A2PYH4 1435 aa33.72■■■□□ 2.99
DDX42-201ENST00000359353 LRRIQ1Q96JM4 1722 aa33.71■■■□□ 2.99
DDX42-201ENST00000359353 NAIPQ13075 1403 aa33.7■■■□□ 2.98
DDX42-201ENST00000359353 NCOA2Q15596 1464 aa33.69■■■□□ 2.98
DDX42-201ENST00000359353 ARID3CA6NKF2 412 aa33.68■■■□□ 2.98
DDX42-201ENST00000359353 CUL7Q14999 1698 aa33.64■■■□□ 2.98
DDX42-201ENST00000359353 MYOM3Q5VTT5 1437 aa33.62■■■□□ 2.97
DDX42-201ENST00000359353 HSPA5P11021 654 aaKnown RBP33.6■■■□□ 2.97
DDX42-201ENST00000359353 FOXD1Q16676 465 aa33.59■■■□□ 2.97
DDX42-201ENST00000359353 WASHC2AQ641Q2 1341 aa33.57■■■□□ 2.97
DDX42-201ENST00000359353 KDM5BQ9UGL1 1544 aa33.57■■■□□ 2.96
DDX42-201ENST00000359353 CCDC184Q52MB2 194 aa33.55■■■□□ 2.96
DDX42-201ENST00000359353 URB2Q14146 1524 aaKnown RBP33.51■■■□□ 2.96
DDX42-201ENST00000359353 GRIN2BQ13224 1484 aa33.51■■■□□ 2.95
DDX42-201ENST00000359353 MAGI3Q5TCQ9 1506 aa33.49■■■□□ 2.95
DDX42-201ENST00000359353 SUPT6HQ7KZ85 1726 aaKnown RBP33.48■■■□□ 2.95
DDX42-201ENST00000359353 SAMD9Q5K651 1589 aa33.47■■■□□ 2.95
DDX42-201ENST00000359353 KDM6BO15054 1643 aa33.44■■■□□ 2.94
DDX42-201ENST00000359353 GAPVD1Q14C86 1478 aa33.43■■■□□ 2.94
DDX42-201ENST00000359353 DENND4BO75064 1496 aaPredicted RBP33.43■■■□□ 2.94
DDX42-201ENST00000359353 C11orf95C9JLR9 678 aaPredicted RBP33.42■■■□□ 2.94
DDX42-201ENST00000359353 MSH5O43196 834 aa33.4■■■□□ 2.94
DDX42-201ENST00000359353 EHBP1L1Q8N3D4 1523 aa33.39■■■□□ 2.94
DDX42-201ENST00000359353 EIF4G2P78344 907 aaKnown RBP eCLIP33.39■■■□□ 2.947e-6■□□□□ 9.1
DDX42-201ENST00000359353 CNGB1Q14028 1251 aaPredicted RBP33.39■■■□□ 2.94
DDX42-201ENST00000359353 FAM9BQ8IZU0 186 aa33.39■■■□□ 2.94
DDX42-201ENST00000359353 L3MBTL2Q969R5 705 aa33.39■■■□□ 2.94
DDX42-201ENST00000359353 UGGT2Q9NYU1 1516 aa33.37■■■□□ 2.93
DDX42-201ENST00000359353 MPHOSPH9Q99550 1183 aa33.35■■■□□ 2.93
DDX42-201ENST00000359353 ABCA5Q8WWZ7 1642 aa33.34■■■□□ 2.93
DDX42-201ENST00000359353 CDK13Q14004 1512 aaKnown RBP33.29■■■□□ 2.92
DDX42-201ENST00000359353 CDK11AQ9UQ88 783 aaPredicted RBP33.26■■■□□ 2.91
DDX42-201ENST00000359353 LAMC3Q9Y6N6 1575 aa33.26■■■□□ 2.91
DDX42-201ENST00000359353 NBPF8Q3BBV2 869 aa33.25■■■□□ 2.91
DDX42-201ENST00000359353 MRS2Q9HD23 443 aa33.24■■■□□ 2.91
DDX42-201ENST00000359353 ARHGEF11O15085 1522 aa33.24■■■□□ 2.91
DDX42-201ENST00000359353 CNTLNQ9NXG0 1405 aa33.23■■■□□ 2.91
DDX42-201ENST00000359353 SENP3-EIF4A1A0A087X0R7 540 aa33.22■■■□□ 2.91
DDX42-201ENST00000359353 PRKRIP1Q9H875 184 aaPredicted RBP33.21■■■□□ 2.91
DDX42-201ENST00000359353 THOC2Q8NI27 1593 aaKnown RBP33.21■■■□□ 2.91
DDX42-201ENST00000359353 HECW1Q76N89 1606 aa33.21■■■□□ 2.91
DDX42-201ENST00000359353 GCC2Q8IWJ2 1684 aa33.21■■■□□ 2.91
DDX42-201ENST00000359353 ZNF644Q9H582 1327 aaPredicted RBP33.18■■■□□ 2.9
DDX42-201ENST00000359353 CCDC7Q96M83 1385 aa33.18■■■□□ 2.9
DDX42-201ENST00000359353 B4GALNT3Q6L9W6 998 aa33.17■■■□□ 2.9
DDX42-201ENST00000359353 EPRSP07814 1512 aaKnown RBP33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms