RNA–Protein interactions for RNA: ENST00000358506.6

PPP1CB-202, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PPP1CB, Length 4,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-202ENST00000358506 TDRD9Q8NDG6 1382 aaKnown RBP22.83■■□□□ 1.24
PPP1CB-202ENST00000358506 NPM1P06748 294 aaKnown RBP eCLIP22.82■■□□□ 1.24
PPP1CB-202ENST00000358506 MYT1Q01538 1121 aa22.82■■□□□ 1.24
PPP1CB-202ENST00000358506 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
PPP1CB-202ENST00000358506 CLSPNQ9HAW4 1339 aa22.8■■□□□ 1.24
PPP1CB-202ENST00000358506 SIN3AQ96ST3 1273 aa22.8■■□□□ 1.24
PPP1CB-202ENST00000358506 CFDP1Q9UEE9 299 aaPredicted RBP22.79■■□□□ 1.24
PPP1CB-202ENST00000358506 DAXXQ9UER7 740 aaPredicted RBP22.78■■□□□ 1.24
PPP1CB-202ENST00000358506 HNRNPUQ00839 825 aaKnown RBP eCLIP22.77■■□□□ 1.24
PPP1CB-202ENST00000358506 KDM2AQ9Y2K7 1162 aa22.77■■□□□ 1.23
PPP1CB-202ENST00000358506 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
PPP1CB-202ENST00000358506 KCNH8Q96L42 1107 aa22.76■■□□□ 1.23
PPP1CB-202ENST00000358506 SCAF1Q9H7N4 1312 aaKnown RBP22.74■■□□□ 1.23
PPP1CB-202ENST00000358506 EIF4G2P78344 907 aaKnown RBP eCLIP22.72■■□□□ 1.23
PPP1CB-202ENST00000358506 FAM9BQ8IZU0 186 aa22.72■■□□□ 1.23
PPP1CB-202ENST00000358506 CHGAP10645 457 aaKnown RBP22.72■■□□□ 1.23
PPP1CB-202ENST00000358506 FKBP8Q14318 412 aa22.7■■□□□ 1.22
PPP1CB-202ENST00000358506 NCAPD3P42695 1498 aa22.61■■□□□ 1.21
PPP1CB-202ENST00000358506 SETD5Q9C0A6 1442 aa22.61■■□□□ 1.21
PPP1CB-202ENST00000358506 ARHGAP35Q9NRY4 1499 aa22.61■■□□□ 1.21
PPP1CB-202ENST00000358506 MRS2Q9HD23 443 aa22.6■■□□□ 1.21
PPP1CB-202ENST00000358506 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
PPP1CB-202ENST00000358506 FMN1Q68DA7 1419 aa22.58■■□□□ 1.21
PPP1CB-202ENST00000358506 FHOD3Q2V2M9 1422 aa22.57■■□□□ 1.2
PPP1CB-202ENST00000358506 TMC1Q8TDI8 760 aa22.56■■□□□ 1.2
PPP1CB-202ENST00000358506 RGL3Q3MIN7 710 aa22.53■■□□□ 1.2
PPP1CB-202ENST00000358506 RAB3GAP2Q9H2M9 1393 aa22.53■■□□□ 1.2
PPP1CB-202ENST00000358506 SALL2Q9Y467 1007 aaPredicted RBP22.51■■□□□ 1.19
PPP1CB-202ENST00000358506 IGF1RP08069 1367 aa22.49■■□□□ 1.19
PPP1CB-202ENST00000358506 TIMELESSQ9UNS1 1208 aa22.49■■□□□ 1.19
PPP1CB-202ENST00000358506 STAG3Q9UJ98 1225 aa22.48■■□□□ 1.19
PPP1CB-202ENST00000358506 ESF1Q9H501 851 aaKnown RBP22.48■■□□□ 1.19
PPP1CB-202ENST00000358506 FGD5Q6ZNL6 1462 aa22.46■■□□□ 1.19
PPP1CB-202ENST00000358506 CANXP27824 592 aaKnown RBP22.44■■□□□ 1.18
PPP1CB-202ENST00000358506 SYNJ1O43426 1573 aa22.4■■□□□ 1.18
PPP1CB-202ENST00000358506 CARMIL2Q6F5E8 1435 aa22.39■■□□□ 1.17
PPP1CB-202ENST00000358506 CARD11Q9BXL7 1154 aa22.39■■□□□ 1.17
PPP1CB-202ENST00000358506 NEFMP07197 916 aa22.38■■□□□ 1.17
PPP1CB-202ENST00000358506 RAD54L2Q9Y4B4 1467 aa22.38■■□□□ 1.17
PPP1CB-202ENST00000358506 RTL5Q5HYW3 569 aaPredicted RBP22.37■■□□□ 1.17
PPP1CB-202ENST00000358506 FOXD1Q16676 465 aa22.35■■□□□ 1.17
PPP1CB-202ENST00000358506 CFTRP13569 1480 aa22.34■■□□□ 1.17
PPP1CB-202ENST00000358506 IRX6P78412 446 aaPredicted RBP22.34■■□□□ 1.17
PPP1CB-202ENST00000358506 DHX57Q6P158 1386 aaKnown RBP22.31■■□□□ 1.16
PPP1CB-202ENST00000358506 KIF21BO75037 1637 aa22.3■■□□□ 1.16
PPP1CB-202ENST00000358506 BICRAQ9NZM4 1560 aa22.3■■□□□ 1.16
PPP1CB-202ENST00000358506 MPHOSPH9Q99550 1183 aa22.29■■□□□ 1.16
PPP1CB-202ENST00000358506 WDR43Q15061 677 aaKnown RBP eCLIP22.28■■□□□ 1.16
PPP1CB-202ENST00000358506 PLPPR3Q6T4P5 718 aa22.27■■□□□ 1.16
PPP1CB-202ENST00000358506 JPH4Q96JJ6 628 aa22.26■■□□□ 1.15
PPP1CB-202ENST00000358506 PPP1R15AO75807 674 aaPredicted RBP22.26■■□□□ 1.15
PPP1CB-202ENST00000358506 GAPVD1Q14C86 1478 aa22.26■■□□□ 1.15
PPP1CB-202ENST00000358506 PKD2Q13563 968 aa22.26■■□□□ 1.15
PPP1CB-202ENST00000358506 SENP3Q9H4L4 574 aaPredicted RBP22.25■■□□□ 1.15
PPP1CB-202ENST00000358506 DCAF11Q8TEB1 546 aa22.24■■□□□ 1.15
PPP1CB-202ENST00000358506 SENP3-EIF4A1A0A087X0R7 540 aa22.24■■□□□ 1.15
PPP1CB-202ENST00000358506 HSPA5P11021 654 aaKnown RBP22.23■■□□□ 1.15
PPP1CB-202ENST00000358506 CCDC136Q96JN2 1154 aa22.23■■□□□ 1.15
PPP1CB-202ENST00000358506 HMGXB3Q12766 1538 aa22.21■■□□□ 1.15
PPP1CB-202ENST00000358506 ANP32AP39687 249 aaKnown RBP22.18■■□□□ 1.14
PPP1CB-202ENST00000358506 CCDC18Q5T9S5 1454 aa22.18■■□□□ 1.14
PPP1CB-202ENST00000358506 SLC24A1O60721 1099 aa22.18■■□□□ 1.14
PPP1CB-202ENST00000358506 ZBTB47Q9UFB7 747 aaPredicted RBP22.18■■□□□ 1.14
PPP1CB-202ENST00000358506 BCL11AQ9H165 835 aa22.17■■□□□ 1.14
PPP1CB-202ENST00000358506 TOP2BQ02880 1626 aa22.17■■□□□ 1.14
PPP1CB-202ENST00000358506 ERICH3Q5RHP9 1530 aa22.17■■□□□ 1.14
PPP1CB-202ENST00000358506 ARAP1Q96P48 1450 aa22.16■■□□□ 1.14
PPP1CB-202ENST00000358506 PRXQ9BXM0 1461 aa22.16■■□□□ 1.14
PPP1CB-202ENST00000358506 NPM2Q86SE8 214 aaKnown RBP22.15■■□□□ 1.14
PPP1CB-202ENST00000358506 SUPT16HQ9Y5B9 1047 aaKnown RBP22.15■■□□□ 1.14
PPP1CB-202ENST00000358506 CUX1P39880 1505 aa22.15■■□□□ 1.14
PPP1CB-202ENST00000358506 ANKRD30AQ9BXX3 1397 aa22.15■■□□□ 1.14
PPP1CB-202ENST00000358506 NESP48681 1621 aa22.14■■□□□ 1.14
PPP1CB-202ENST00000358506 NUP155O75694 1391 aa22.14■■□□□ 1.13
PPP1CB-202ENST00000358506 CDCA8Q53HL2 280 aa22.13■■□□□ 1.13
PPP1CB-202ENST00000358506 KNSTRNQ9Y448 316 aa22.12■■□□□ 1.13
PPP1CB-202ENST00000358506 L3MBTL2Q969R5 705 aa22.12■■□□□ 1.13
PPP1CB-202ENST00000358506 CCER2I3L3R5 266 aa22.11■■□□□ 1.13
PPP1CB-202ENST00000358506 HNRNPMP52272 730 aaKnown RBP eCLIP22.11■■□□□ 1.131e-6■■■■□ 24.5
PPP1CB-202ENST00000358506 AQRO60306 1485 aaKnown RBP eCLIP22.09■■□□□ 1.133e-8■■■■□ 22.1
PPP1CB-202ENST00000358506 PHLDB1Q86UU1 1377 aa22.09■■□□□ 1.13
PPP1CB-202ENST00000358506 CC2D2AQ9P2K1 1620 aa22.09■■□□□ 1.13
PPP1CB-202ENST00000358506 EFCAB2Q5VUJ9 269 aa22.08■■□□□ 1.13
PPP1CB-202ENST00000358506 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.07■■□□□ 1.12
PPP1CB-202ENST00000358506 LRRC9Q6ZRR7 1453 aa22.05■■□□□ 1.12
PPP1CB-202ENST00000358506 KANK1Q14678 1352 aa22.01■■□□□ 1.11
PPP1CB-202ENST00000358506 CC2D1BQ5T0F9 858 aaKnown RBP22.01■■□□□ 1.11
PPP1CB-202ENST00000358506 FGD6Q6ZV73 1430 aa22■■□□□ 1.11
PPP1CB-202ENST00000358506 TOPBP1Q92547 1522 aa22■■□□□ 1.11
PPP1CB-202ENST00000358506 TMF1P82094 1093 aa22■■□□□ 1.11
PPP1CB-202ENST00000358506 CASKIN1Q8WXD9 1431 aa21.98■■□□□ 1.11
PPP1CB-202ENST00000358506 POLA1P09884 1462 aaPredicted RBP21.98■■□□□ 1.11
PPP1CB-202ENST00000358506 PTPRGP23470 1445 aa21.97■■□□□ 1.11
PPP1CB-202ENST00000358506 RSPH4AQ5TD94 716 aa21.97■■□□□ 1.11
PPP1CB-202ENST00000358506 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
PPP1CB-202ENST00000358506 MYOM3Q5VTT5 1437 aa21.95■■□□□ 1.1
PPP1CB-202ENST00000358506 GGT6Q6P531 493 aa21.95■■□□□ 1.1
PPP1CB-202ENST00000358506 UNC13AQ9UPW8 1703 aa21.93■■□□□ 1.1
PPP1CB-202ENST00000358506 RRBP1Q9P2E9 1410 aaKnown RBP21.92■■□□□ 1.1
PPP1CB-202ENST00000358506 ARID4BQ4LE39 1312 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms