RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 TIAM1Q13009 1591 aa20.83■□□□□ 0.92
TOP3B-201ENST00000357179 MAPKBP1O60336 1514 aa20.78■□□□□ 0.92
TOP3B-201ENST00000357179 NEFLP07196 543 aa20.78■□□□□ 0.92
TOP3B-201ENST00000357179 IGF1RP08069 1367 aa20.78■□□□□ 0.92
TOP3B-201ENST00000357179 RAB3GAP2Q9H2M9 1393 aa20.78■□□□□ 0.92
TOP3B-201ENST00000357179 FANCIQ9NVI1 1328 aa20.76■□□□□ 0.91
TOP3B-201ENST00000357179 SETD5Q9C0A6 1442 aa20.73■□□□□ 0.91
TOP3B-201ENST00000357179 LRRC9Q6ZRR7 1453 aa20.73■□□□□ 0.91
TOP3B-201ENST00000357179 MYT1LQ9UL68 1186 aa20.69■□□□□ 0.9
TOP3B-201ENST00000357179 FHAD1B1AJZ9 1412 aa20.69■□□□□ 0.9
TOP3B-201ENST00000357179 ITGAEP38570 1179 aa20.69■□□□□ 0.9
TOP3B-201ENST00000357179 CARMIL1Q5VZK9 1371 aa20.68■□□□□ 0.9
TOP3B-201ENST00000357179 CFAP43Q8NDM7 1665 aa20.68■□□□□ 0.9
TOP3B-201ENST00000357179 TIMELESSQ9UNS1 1208 aa20.66■□□□□ 0.9
TOP3B-201ENST00000357179 PHLDB1Q86UU1 1377 aa20.63■□□□□ 0.89
TOP3B-201ENST00000357179 CADPSQ9ULU8 1353 aa20.63■□□□□ 0.89
TOP3B-201ENST00000357179 FGD5Q6ZNL6 1462 aa20.62■□□□□ 0.89
TOP3B-201ENST00000357179 ERICH6Q7L0X2 663 aa20.62■□□□□ 0.89
TOP3B-201ENST00000357179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.6■□□□□ 0.89
TOP3B-201ENST00000357179 PCF11O94913 1555 aaKnown RBP20.58■□□□□ 0.88
TOP3B-201ENST00000357179 WDR97A6NE52 1622 aa20.57■□□□□ 0.88
TOP3B-201ENST00000357179 CCER2I3L3R5 266 aa20.56■□□□□ 0.88
TOP3B-201ENST00000357179 EFCAB5A4FU69 1503 aa20.54■□□□□ 0.88
TOP3B-201ENST00000357179 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.884e-7■■■■■ 29.7
TOP3B-201ENST00000357179 FYCO1Q9BQS8 1478 aa20.54■□□□□ 0.88
TOP3B-201ENST00000357179 DDX10Q13206 875 aaKnown RBP20.54■□□□□ 0.88
TOP3B-201ENST00000357179 DEKP35659 375 aaKnown RBP20.53■□□□□ 0.88
TOP3B-201ENST00000357179 PPP1R15AO75807 674 aaPredicted RBP20.52■□□□□ 0.87
TOP3B-201ENST00000357179 TRIM52Q96A61 297 aa20.52■□□□□ 0.87
TOP3B-201ENST00000357179 CDK11AQ9UQ88 783 aaPredicted RBP20.52■□□□□ 0.87
TOP3B-201ENST00000357179 CASKIN1Q8WXD9 1431 aa20.49■□□□□ 0.87
TOP3B-201ENST00000357179 FAM50AQ14320 339 aaKnown RBP20.49■□□□□ 0.87
TOP3B-201ENST00000357179 SIN3AQ96ST3 1273 aa20.47■□□□□ 0.87
TOP3B-201ENST00000357179 CC2D2AQ9P2K1 1620 aa20.46■□□□□ 0.87
TOP3B-201ENST00000357179 ABCA10Q8WWZ4 1543 aa20.45■□□□□ 0.86
TOP3B-201ENST00000357179 CUL7Q14999 1698 aa20.44■□□□□ 0.86
TOP3B-201ENST00000357179 DNMBPQ6XZF7 1577 aa20.43■□□□□ 0.86
TOP3B-201ENST00000357179 FHOD3Q2V2M9 1422 aa20.42■□□□□ 0.86
TOP3B-201ENST00000357179 FANCD2Q9BXW9 1451 aa20.41■□□□□ 0.86
TOP3B-201ENST00000357179 CTTNBP2Q8WZ74 1663 aa20.4■□□□□ 0.86
TOP3B-201ENST00000357179 ANP32CO43423 234 aa20.4■□□□□ 0.86
TOP3B-201ENST00000357179 FMN1Q68DA7 1419 aa20.38■□□□□ 0.85
TOP3B-201ENST00000357179 FGD6Q6ZV73 1430 aa20.38■□□□□ 0.85
TOP3B-201ENST00000357179 P3H3Q8IVL6 736 aa20.35■□□□□ 0.85
TOP3B-201ENST00000357179 ANO8Q9HCE9 1232 aaPredicted RBP20.35■□□□□ 0.85
TOP3B-201ENST00000357179 ERICH6BQ5W0A0 696 aa20.34■□□□□ 0.85
TOP3B-201ENST00000357179 HFM1A2PYH4 1435 aa20.34■□□□□ 0.85
TOP3B-201ENST00000357179 POLA1P09884 1462 aaPredicted RBP20.34■□□□□ 0.85
TOP3B-201ENST00000357179 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
TOP3B-201ENST00000357179 TOPBP1Q92547 1522 aa20.33■□□□□ 0.85
TOP3B-201ENST00000357179 UACAQ9BZF9 1416 aa20.33■□□□□ 0.85
TOP3B-201ENST00000357179 CCDC18Q5T9S5 1454 aa20.33■□□□□ 0.84
TOP3B-201ENST00000357179 RAD54L2Q9Y4B4 1467 aa20.32■□□□□ 0.84
TOP3B-201ENST00000357179 ATP1B4Q9UN42 357 aaPredicted RBP20.31■□□□□ 0.84
TOP3B-201ENST00000357179 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
TOP3B-201ENST00000357179 PTPN23Q9H3S7 1636 aa20.3■□□□□ 0.84
TOP3B-201ENST00000357179 THOC2Q8NI27 1593 aaKnown RBP20.28■□□□□ 0.84
TOP3B-201ENST00000357179 SAMD9Q5K651 1589 aa20.27■□□□□ 0.84
TOP3B-201ENST00000357179 IRX6P78412 446 aaPredicted RBP20.27■□□□□ 0.83
TOP3B-201ENST00000357179 PPP4R2Q9NY27 417 aa20.26■□□□□ 0.83
TOP3B-201ENST00000357179 MTUS2Q5JR59 1369 aa20.25■□□□□ 0.83
TOP3B-201ENST00000357179 NOP58Q9Y2X3 529 aaKnown RBP20.24■□□□□ 0.83
TOP3B-201ENST00000357179 PTPRKQ15262 1439 aa20.24■□□□□ 0.83
TOP3B-201ENST00000357179 MYOM3Q5VTT5 1437 aa20.23■□□□□ 0.83
TOP3B-201ENST00000357179 NAIPQ13075 1403 aa20.22■□□□□ 0.83
TOP3B-201ENST00000357179 GRIN2BQ13224 1484 aa20.21■□□□□ 0.83
TOP3B-201ENST00000357179 NCOA2Q15596 1464 aa20.21■□□□□ 0.83
TOP3B-201ENST00000357179 SUPT6HQ7KZ85 1726 aaKnown RBP20.2■□□□□ 0.83
TOP3B-201ENST00000357179 EHBP1L1Q8N3D4 1523 aa20.2■□□□□ 0.82
TOP3B-201ENST00000357179 HNRNPUQ00839 825 aaKnown RBP eCLIP20.2■□□□□ 0.82
TOP3B-201ENST00000357179 HIRIP3Q9BW71 556 aaPredicted RBP20.2■□□□□ 0.82
TOP3B-201ENST00000357179 LRRIQ1Q96JM4 1722 aa20.2■□□□□ 0.82
TOP3B-201ENST00000357179 KDM5BQ9UGL1 1544 aa20.19■□□□□ 0.82
TOP3B-201ENST00000357179 KIF21AQ7Z4S6 1674 aa20.18■□□□□ 0.82
TOP3B-201ENST00000357179 NBR1Q14596 966 aa20.17■□□□□ 0.82
TOP3B-201ENST00000357179 SALL2Q9Y467 1007 aaPredicted RBP20.17■□□□□ 0.82
TOP3B-201ENST00000357179 ABCA5Q8WWZ7 1642 aa20.17■□□□□ 0.82
TOP3B-201ENST00000357179 ARHGEF11O15085 1522 aa20.16■□□□□ 0.82
TOP3B-201ENST00000357179 PAK3O75914 559 aaPredicted RBP20.15■□□□□ 0.82
TOP3B-201ENST00000357179 UGGT2Q9NYU1 1516 aa20.14■□□□□ 0.82
TOP3B-201ENST00000357179 TCOF1Q13428 1488 aaKnown RBP20.12■□□□□ 0.81
TOP3B-201ENST00000357179 AKNAQ7Z591 1439 aa20.12■□□□□ 0.81
TOP3B-201ENST00000357179 GCC2Q8IWJ2 1684 aa20.11■□□□□ 0.81
TOP3B-201ENST00000357179 HECW1Q76N89 1606 aa20.11■□□□□ 0.81
TOP3B-201ENST00000357179 LAMC3Q9Y6N6 1575 aa20.1■□□□□ 0.81
TOP3B-201ENST00000357179 URB2Q14146 1524 aaKnown RBP20.1■□□□□ 0.81
TOP3B-201ENST00000357179 NESP48681 1621 aa20.08■□□□□ 0.81
TOP3B-201ENST00000357179 GAPVD1Q14C86 1478 aa20.08■□□□□ 0.8
TOP3B-201ENST00000357179 B4GALNT3Q6L9W6 998 aa20.07■□□□□ 0.8
TOP3B-201ENST00000357179 RTL5Q5HYW3 569 aaPredicted RBP20.04■□□□□ 0.8
TOP3B-201ENST00000357179 MAGI3Q5TCQ9 1506 aa20.03■□□□□ 0.8
TOP3B-201ENST00000357179 DENND4BO75064 1496 aaPredicted RBP20.02■□□□□ 0.8
TOP3B-201ENST00000357179 IL27Q8NEV9 243 aa20.01■□□□□ 0.79
TOP3B-201ENST00000357179 IPO9Q96P70 1041 aaKnown RBP20.01■□□□□ 0.79
TOP3B-201ENST00000357179 MIA2Q96PC5 1412 aa20.01■□□□□ 0.79
TOP3B-201ENST00000357179 TDRD9Q8NDG6 1382 aaKnown RBP20.01■□□□□ 0.79
TOP3B-201ENST00000357179 WASHC2AQ641Q2 1341 aa20■□□□□ 0.79
TOP3B-201ENST00000357179 HSPA5P11021 654 aaKnown RBP19.99■□□□□ 0.79
TOP3B-201ENST00000357179 CNTLNQ9NXG0 1405 aa19.97■□□□□ 0.79
TOP3B-201ENST00000357179 ANP32AP39687 249 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms