RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 ERCC6Q03468 1493 aa26.05■■□□□ 1.76
GYPC-202ENST00000356887 MRC2Q9UBG0 1479 aa26.05■■□□□ 1.76
GYPC-202ENST00000356887 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
GYPC-202ENST00000356887 CCNB3Q8WWL7 1395 aa26■■□□□ 1.75
GYPC-202ENST00000356887 CARMIL1Q5VZK9 1371 aa26■■□□□ 1.75
GYPC-202ENST00000356887 MAP3K1Q13233 1512 aa25.97■■□□□ 1.75
GYPC-202ENST00000356887 RAD54L2Q9Y4B4 1467 aa25.96■■□□□ 1.75
GYPC-202ENST00000356887 THOC2Q8NI27 1593 aaKnown RBP25.93■■□□□ 1.74
GYPC-202ENST00000356887 WDR62O43379 1518 aa25.93■■□□□ 1.74
GYPC-202ENST00000356887 TIAM1Q13009 1591 aa25.92■■□□□ 1.74
GYPC-202ENST00000356887 YTHDC1Q96MU7 727 aaKnown RBP25.9■■□□□ 1.74
GYPC-202ENST00000356887 ABCA10Q8WWZ4 1543 aa25.88■■□□□ 1.73
GYPC-202ENST00000356887 WDR97A6NE52 1622 aa25.88■■□□□ 1.73
GYPC-202ENST00000356887 LRRC9Q6ZRR7 1453 aa25.82■■□□□ 1.72
GYPC-202ENST00000356887 TARBP1Q13395 1621 aaKnown RBP25.81■■□□□ 1.72
GYPC-202ENST00000356887 FHAD1B1AJZ9 1412 aa25.78■■□□□ 1.72
GYPC-202ENST00000356887 ITGAEP38570 1179 aa25.78■■□□□ 1.72
GYPC-202ENST00000356887 RAB3GAP2Q9H2M9 1393 aa25.75■■□□□ 1.71
GYPC-202ENST00000356887 CFAP43Q8NDM7 1665 aa25.73■■□□□ 1.71
GYPC-202ENST00000356887 ABCA5Q8WWZ7 1642 aa25.73■■□□□ 1.71
GYPC-202ENST00000356887 PHLDB1Q86UU1 1377 aa25.72■■□□□ 1.71
GYPC-202ENST00000356887 TDRD9Q8NDG6 1382 aaKnown RBP25.7■■□□□ 1.71
GYPC-202ENST00000356887 PCF11O94913 1555 aaKnown RBP25.7■■□□□ 1.7
GYPC-202ENST00000356887 SETD5Q9C0A6 1442 aa25.69■■□□□ 1.7
GYPC-202ENST00000356887 MAPKBP1O60336 1514 aa25.68■■□□□ 1.7
GYPC-202ENST00000356887 IFT140Q96RY7 1462 aa25.68■■□□□ 1.7
GYPC-202ENST00000356887 EFCAB5A4FU69 1503 aa25.65■■□□□ 1.7
GYPC-202ENST00000356887 P3H3Q8IVL6 736 aa25.65■■□□□ 1.7
GYPC-202ENST00000356887 GAPVD1Q14C86 1478 aa25.64■■□□□ 1.7
GYPC-202ENST00000356887 CUL7Q14999 1698 aa25.64■■□□□ 1.7
GYPC-202ENST00000356887 FHOD3Q2V2M9 1422 aa25.62■■□□□ 1.69
GYPC-202ENST00000356887 FYCO1Q9BQS8 1478 aa25.62■■□□□ 1.69
GYPC-202ENST00000356887 AQRO60306 1485 aaKnown RBP eCLIP25.61■■□□□ 1.692e-7■■■■□ 23.9
GYPC-202ENST00000356887 CASKIN1Q8WXD9 1431 aa25.6■■□□□ 1.69
GYPC-202ENST00000356887 ZNF608Q9ULD9 1512 aaPredicted RBP25.59■■□□□ 1.69
GYPC-202ENST00000356887 PBRM1Q86U86 1689 aa25.59■■□□□ 1.69
GYPC-202ENST00000356887 CTTNBP2Q8WZ74 1663 aa25.58■■□□□ 1.68
GYPC-202ENST00000356887 FAM50AQ14320 339 aaKnown RBP25.57■■□□□ 1.68
GYPC-202ENST00000356887 ATP1B4Q9UN42 357 aaPredicted RBP25.54■■□□□ 1.68
GYPC-202ENST00000356887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.53■■□□□ 1.682e-7■■□□□ 13.2
GYPC-202ENST00000356887 EIF4G3O43432 1585 aaKnown RBP25.53■■□□□ 1.68
GYPC-202ENST00000356887 FMN1Q68DA7 1419 aa25.48■■□□□ 1.67
GYPC-202ENST00000356887 GRIN2BQ13224 1484 aa25.46■■□□□ 1.67
GYPC-202ENST00000356887 SNAPC4Q5SXM2 1469 aa25.44■■□□□ 1.66
GYPC-202ENST00000356887 SIN3AQ96ST3 1273 aa25.42■■□□□ 1.66
GYPC-202ENST00000356887 TIMELESSQ9UNS1 1208 aa25.42■■□□□ 1.66
GYPC-202ENST00000356887 ADAMTS12P58397 1594 aa25.4■■□□□ 1.66
GYPC-202ENST00000356887 SAMD9Q5K651 1589 aa25.4■■□□□ 1.66
GYPC-202ENST00000356887 FGD6Q6ZV73 1430 aa25.38■■□□□ 1.65
GYPC-202ENST00000356887 MTUS2Q5JR59 1369 aa25.31■■□□□ 1.64
GYPC-202ENST00000356887 LRRIQ1Q96JM4 1722 aa25.31■■□□□ 1.64
GYPC-202ENST00000356887 PPP1R15AO75807 674 aaPredicted RBP25.28■■□□□ 1.64
GYPC-202ENST00000356887 MAGI1Q96QZ7 1491 aaPredicted RBP25.27■■□□□ 1.64
GYPC-202ENST00000356887 PTPRKQ15262 1439 aa25.25■■□□□ 1.63
GYPC-202ENST00000356887 HFM1A2PYH4 1435 aa25.25■■□□□ 1.63
GYPC-202ENST00000356887 NCOA2Q15596 1464 aa25.24■■□□□ 1.63
GYPC-202ENST00000356887 CCDC18Q5T9S5 1454 aa25.23■■□□□ 1.63
GYPC-202ENST00000356887 MYOM3Q5VTT5 1437 aa25.22■■□□□ 1.63
GYPC-202ENST00000356887 DDX10Q13206 875 aaKnown RBP25.21■■□□□ 1.63
GYPC-202ENST00000356887 KCNH8Q96L42 1107 aa25.21■■□□□ 1.63
GYPC-202ENST00000356887 PTPN23Q9H3S7 1636 aa25.2■■□□□ 1.63
GYPC-202ENST00000356887 SUPT16HQ9Y5B9 1047 aaKnown RBP25.2■■□□□ 1.62
GYPC-202ENST00000356887 SUPT6HQ7KZ85 1726 aaKnown RBP25.2■■□□□ 1.62
GYPC-202ENST00000356887 UACAQ9BZF9 1416 aa25.2■■□□□ 1.62
GYPC-202ENST00000356887 EHBP1L1Q8N3D4 1523 aa25.19■■□□□ 1.62
GYPC-202ENST00000356887 SYNJ2O15056 1496 aa25.18■■□□□ 1.62
GYPC-202ENST00000356887 GRIN2AQ12879 1464 aa25.17■■□□□ 1.62
GYPC-202ENST00000356887 NAIPQ13075 1403 aa25.16■■□□□ 1.62
GYPC-202ENST00000356887 ARHGEF11O15085 1522 aa25.15■■□□□ 1.62
GYPC-202ENST00000356887 UGGT2Q9NYU1 1516 aa25.14■■□□□ 1.62
GYPC-202ENST00000356887 MAGI3Q5TCQ9 1506 aa25.11■■□□□ 1.61
GYPC-202ENST00000356887 TONSLQ96HA7 1378 aa25.11■■□□□ 1.61
GYPC-202ENST00000356887 CHMP7Q8WUX9 453 aaPredicted RBP25.11■■□□□ 1.61
GYPC-202ENST00000356887 FBLN2P98095 1184 aa25.09■■□□□ 1.61
GYPC-202ENST00000356887 IQGAP2Q13576 1575 aa25.06■■□□□ 1.6
GYPC-202ENST00000356887 TCOF1Q13428 1488 aaKnown RBP25.06■■□□□ 1.6
GYPC-202ENST00000356887 HIRIP3Q9BW71 556 aaPredicted RBP25.06■■□□□ 1.6
GYPC-202ENST00000356887 HECW1Q76N89 1606 aa25.05■■□□□ 1.6
GYPC-202ENST00000356887 CEP170Q5SW79 1584 aa25.05■■□□□ 1.6
GYPC-202ENST00000356887 CHD1O14646 1710 aa25.04■■□□□ 1.6
GYPC-202ENST00000356887 CCER2I3L3R5 266 aa25.02■■□□□ 1.6
GYPC-202ENST00000356887 EPRSP07814 1512 aaKnown RBP24.99■■□□□ 1.59
GYPC-202ENST00000356887 KIAA0586Q9BVV6 1533 aa24.99■■□□□ 1.59
GYPC-202ENST00000356887 KDM5BQ9UGL1 1544 aa24.98■■□□□ 1.59
GYPC-202ENST00000356887 NUP160Q12769 1436 aa24.98■■□□□ 1.59
GYPC-202ENST00000356887 GCC2Q8IWJ2 1684 aa24.97■■□□□ 1.59
GYPC-202ENST00000356887 ANP32CO43423 234 aa24.97■■□□□ 1.59
GYPC-202ENST00000356887 AKNAQ7Z591 1439 aa24.95■■□□□ 1.59
GYPC-202ENST00000356887 RRP7BPQ9NSQ0 103 aa24.94■■□□□ 1.58
GYPC-202ENST00000356887 MIA2Q96PC5 1412 aa24.94■■□□□ 1.58
GYPC-202ENST00000356887 CDK13Q14004 1512 aaKnown RBP24.91■■□□□ 1.58
GYPC-202ENST00000356887 DENND4BO75064 1496 aaPredicted RBP24.91■■□□□ 1.58
GYPC-202ENST00000356887 CHIC2Q9UKJ5 165 aa24.9■■□□□ 1.58
GYPC-202ENST00000356887 KDM6BO15054 1643 aa24.87■■□□□ 1.57
GYPC-202ENST00000356887 TRIM52Q96A61 297 aa24.82■■□□□ 1.56
GYPC-202ENST00000356887 KIAA0556O60303 1618 aa24.82■■□□□ 1.56
GYPC-202ENST00000356887 DISP1Q96F81 1524 aa24.82■■□□□ 1.56
GYPC-202ENST00000356887 MPHOSPH9Q99550 1183 aa24.79■■□□□ 1.56
GYPC-202ENST00000356887 TSHZ2Q9NRE2 1034 aa24.77■■□□□ 1.56
GYPC-202ENST00000356887 ARID3CA6NKF2 412 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms