RNA–Protein interactions for RNA: ENST00000355790.8

LRRC20-201, Transcript of leucine rich repeat containing 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC20, Length 3,414 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC20-201ENST00000355790 RAD54L2Q9Y4B4 1467 aa20.55■□□□□ 0.88
LRRC20-201ENST00000355790 SIN3AQ96ST3 1273 aa20.51■□□□□ 0.87
LRRC20-201ENST00000355790 TDRD9Q8NDG6 1382 aaKnown RBP20.51■□□□□ 0.87
LRRC20-201ENST00000355790 SETD5Q9C0A6 1442 aa20.5■□□□□ 0.87
LRRC20-201ENST00000355790 FHAD1B1AJZ9 1412 aa20.49■□□□□ 0.87
LRRC20-201ENST00000355790 PDS5BQ9NTI5 1447 aa20.48■□□□□ 0.87
LRRC20-201ENST00000355790 PHLDB1Q86UU1 1377 aa20.48■□□□□ 0.87
LRRC20-201ENST00000355790 TIAM1Q13009 1591 aa20.47■□□□□ 0.87
LRRC20-201ENST00000355790 LRRC9Q6ZRR7 1453 aa20.47■□□□□ 0.87
LRRC20-201ENST00000355790 DDX10Q13206 875 aaKnown RBP20.44■□□□□ 0.86
LRRC20-201ENST00000355790 FHOD3Q2V2M9 1422 aa20.43■□□□□ 0.86
LRRC20-201ENST00000355790 TOPBP1Q92547 1522 aa20.4■□□□□ 0.86
LRRC20-201ENST00000355790 KCNH8Q96L42 1107 aa20.39■□□□□ 0.86
LRRC20-201ENST00000355790 MAP3K1Q13233 1512 aa20.39■□□□□ 0.85
LRRC20-201ENST00000355790 HIRIP3Q9BW71 556 aaPredicted RBP20.39■□□□□ 0.85
LRRC20-201ENST00000355790 SUPT16HQ9Y5B9 1047 aaKnown RBP20.38■□□□□ 0.85
LRRC20-201ENST00000355790 POLA1P09884 1462 aaPredicted RBP20.37■□□□□ 0.85
LRRC20-201ENST00000355790 PRDM2Q13029 1718 aa20.35■□□□□ 0.85
LRRC20-201ENST00000355790 MAPKBP1O60336 1514 aa20.35■□□□□ 0.85
LRRC20-201ENST00000355790 FBLN2P98095 1184 aa20.34■□□□□ 0.85
LRRC20-201ENST00000355790 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
LRRC20-201ENST00000355790 PCF11O94913 1555 aaKnown RBP20.31■□□□□ 0.84
LRRC20-201ENST00000355790 MTUS2Q5JR59 1369 aa20.3■□□□□ 0.84
LRRC20-201ENST00000355790 LAMC3Q9Y6N6 1575 aa20.3■□□□□ 0.84
LRRC20-201ENST00000355790 ERCC6Q03468 1493 aa20.29■□□□□ 0.84
LRRC20-201ENST00000355790 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
LRRC20-201ENST00000355790 ARID3CA6NKF2 412 aa20.28■□□□□ 0.84
LRRC20-201ENST00000355790 MYT1Q01538 1121 aa20.27■□□□□ 0.84
LRRC20-201ENST00000355790 TIMELESSQ9UNS1 1208 aa20.25■□□□□ 0.83
LRRC20-201ENST00000355790 WDR97A6NE52 1622 aa20.25■□□□□ 0.83
LRRC20-201ENST00000355790 PPP1R15AO75807 674 aaPredicted RBP20.25■□□□□ 0.83
LRRC20-201ENST00000355790 CASKIN1Q8WXD9 1431 aa20.24■□□□□ 0.83
LRRC20-201ENST00000355790 TONSLQ96HA7 1378 aa20.24■□□□□ 0.83
LRRC20-201ENST00000355790 ABCA10Q8WWZ4 1543 aa20.24■□□□□ 0.83
LRRC20-201ENST00000355790 BCANQ96GW7 911 aa20.24■□□□□ 0.83
LRRC20-201ENST00000355790 FYCO1Q9BQS8 1478 aa20.23■□□□□ 0.83
LRRC20-201ENST00000355790 ANP32CO43423 234 aa20.23■□□□□ 0.83
LRRC20-201ENST00000355790 FMN1Q68DA7 1419 aa20.22■□□□□ 0.83
LRRC20-201ENST00000355790 AQRO60306 1485 aaKnown RBP eCLIP20.2■□□□□ 0.82
LRRC20-201ENST00000355790 EFCAB5A4FU69 1503 aa20.18■□□□□ 0.82
LRRC20-201ENST00000355790 FGD6Q6ZV73 1430 aa20.17■□□□□ 0.82
LRRC20-201ENST00000355790 CFAP43Q8NDM7 1665 aa20.17■□□□□ 0.82
LRRC20-201ENST00000355790 GAPVD1Q14C86 1478 aa20.17■□□□□ 0.82
LRRC20-201ENST00000355790 FKBP8Q14318 412 aa20.15■□□□□ 0.82
LRRC20-201ENST00000355790 TRIM52Q96A61 297 aa20.15■□□□□ 0.82
LRRC20-201ENST00000355790 CHIC2Q9UKJ5 165 aa20.15■□□□□ 0.82
LRRC20-201ENST00000355790 NEFLP07196 543 aa20.14■□□□□ 0.82
LRRC20-201ENST00000355790 KIF21AQ7Z4S6 1674 aa20.14■□□□□ 0.81
LRRC20-201ENST00000355790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.13■□□□□ 0.81
LRRC20-201ENST00000355790 RRP7BPQ9NSQ0 103 aa20.12■□□□□ 0.81
LRRC20-201ENST00000355790 CCDC18Q5T9S5 1454 aa20.11■□□□□ 0.81
LRRC20-201ENST00000355790 CUL7Q14999 1698 aa20.09■□□□□ 0.81
LRRC20-201ENST00000355790 CHMP7Q8WUX9 453 aaPredicted RBP20.08■□□□□ 0.81
LRRC20-201ENST00000355790 MRC2Q9UBG0 1479 aa20.07■□□□□ 0.8
LRRC20-201ENST00000355790 CCER2I3L3R5 266 aa20.05■□□□□ 0.8
LRRC20-201ENST00000355790 TSHZ2Q9NRE2 1034 aa20.05■□□□□ 0.8
LRRC20-201ENST00000355790 PTPRKQ15262 1439 aa20.05■□□□□ 0.8
LRRC20-201ENST00000355790 NCOA2Q15596 1464 aa20.04■□□□□ 0.8
LRRC20-201ENST00000355790 UACAQ9BZF9 1416 aa20.03■□□□□ 0.8
LRRC20-201ENST00000355790 MYOM3Q5VTT5 1437 aa20.03■□□□□ 0.8
LRRC20-201ENST00000355790 CTTNBP2Q8WZ74 1663 aa20.03■□□□□ 0.8
LRRC20-201ENST00000355790 SNAPC4Q5SXM2 1469 aa20.02■□□□□ 0.8
LRRC20-201ENST00000355790 HFM1A2PYH4 1435 aa20.02■□□□□ 0.8
LRRC20-201ENST00000355790 ZNF608Q9ULD9 1512 aaPredicted RBP20■□□□□ 0.79
LRRC20-201ENST00000355790 NAIPQ13075 1403 aa19.99■□□□□ 0.79
LRRC20-201ENST00000355790 PTPN23Q9H3S7 1636 aa19.93■□□□□ 0.78
LRRC20-201ENST00000355790 GRIN2BQ13224 1484 aa19.93■□□□□ 0.78
LRRC20-201ENST00000355790 HNRNPUQ00839 825 aaKnown RBP eCLIP19.92■□□□□ 0.78
LRRC20-201ENST00000355790 HSPA5P11021 654 aaKnown RBP19.91■□□□□ 0.78
LRRC20-201ENST00000355790 FOXD1Q16676 465 aa19.9■□□□□ 0.78
LRRC20-201ENST00000355790 SUPT6HQ7KZ85 1726 aaKnown RBP19.89■□□□□ 0.78
LRRC20-201ENST00000355790 EHBP1L1Q8N3D4 1523 aa19.89■□□□□ 0.77
LRRC20-201ENST00000355790 EIF4G2P78344 907 aaKnown RBP eCLIP19.89■□□□□ 0.771e-7■■■■□ 19.4
LRRC20-201ENST00000355790 MPHOSPH9Q99550 1183 aa19.88■□□□□ 0.77
LRRC20-201ENST00000355790 SAMD9Q5K651 1589 aa19.88■□□□□ 0.77
LRRC20-201ENST00000355790 ABCA5Q8WWZ7 1642 aa19.86■□□□□ 0.77
LRRC20-201ENST00000355790 IFT140Q96RY7 1462 aa19.85■□□□□ 0.77
LRRC20-201ENST00000355790 L3MBTL2Q969R5 705 aa19.83■□□□□ 0.77
LRRC20-201ENST00000355790 UGGT2Q9NYU1 1516 aa19.82■□□□□ 0.76
LRRC20-201ENST00000355790 TARBP1Q13395 1621 aaKnown RBP19.81■□□□□ 0.76
LRRC20-201ENST00000355790 WASHC2AQ641Q2 1341 aa19.81■□□□□ 0.76
LRRC20-201ENST00000355790 THOC2Q8NI27 1593 aaKnown RBP19.8■□□□□ 0.76
LRRC20-201ENST00000355790 IRX6P78412 446 aaPredicted RBP19.8■□□□□ 0.76
LRRC20-201ENST00000355790 MAGI3Q5TCQ9 1506 aa19.8■□□□□ 0.76
LRRC20-201ENST00000355790 LRRIQ1Q96JM4 1722 aa19.79■□□□□ 0.76
LRRC20-201ENST00000355790 EPRSP07814 1512 aaKnown RBP19.78■□□□□ 0.76
LRRC20-201ENST00000355790 CDK13Q14004 1512 aaKnown RBP19.78■□□□□ 0.76
LRRC20-201ENST00000355790 SLC4A1APQ9BWU0 796 aaKnown RBP19.78■□□□□ 0.76
LRRC20-201ENST00000355790 CNGB1Q14028 1251 aaPredicted RBP19.77■□□□□ 0.76
LRRC20-201ENST00000355790 CDK11AQ9UQ88 783 aaPredicted RBP19.76■□□□□ 0.75
LRRC20-201ENST00000355790 FAM9BQ8IZU0 186 aa19.75■□□□□ 0.75
LRRC20-201ENST00000355790 HECW1Q76N89 1606 aa19.74■□□□□ 0.75
LRRC20-201ENST00000355790 ZNF644Q9H582 1327 aaPredicted RBP19.74■□□□□ 0.75
LRRC20-201ENST00000355790 JPH4Q96JJ6 628 aa19.74■□□□□ 0.75
LRRC20-201ENST00000355790 POLR3GLQ9BT43 218 aa19.74■□□□□ 0.75
LRRC20-201ENST00000355790 ZNF777Q9ULD5 760 aaPredicted RBP19.73■□□□□ 0.75
LRRC20-201ENST00000355790 IQGAP2Q13576 1575 aa19.73■□□□□ 0.75
LRRC20-201ENST00000355790 WDR62O43379 1518 aa19.72■□□□□ 0.75
LRRC20-201ENST00000355790 MIA2Q96PC5 1412 aa19.72■□□□□ 0.75
LRRC20-201ENST00000355790 TCOF1Q13428 1488 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms