RNA–Protein interactions for RNA: ENST00000355790.8

LRRC20-201, Transcript of leucine rich repeat containing 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC20, Length 3,414 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC20-201ENST00000355790 NISCHQ9Y2I1 1504 aa28.83■■■□□ 2.21
LRRC20-201ENST00000355790 SHROOM4Q9ULL8 1493 aa25.09■■□□□ 1.61
LRRC20-201ENST00000355790 DCAF8L2P0C7V8 631 aa24.9■■□□□ 1.58
LRRC20-201ENST00000355790 SUPT5HO00267 1087 aaKnown RBP24.74■■□□□ 1.55
LRRC20-201ENST00000355790 ZCCHC6Q5VYS8 1495 aaKnown RBP24.34■■□□□ 1.49
LRRC20-201ENST00000355790 CCDC180Q9P1Z9 1646 aa24.25■■□□□ 1.47
LRRC20-201ENST00000355790 CHIC1Q5VXU3 224 aa23.9■■□□□ 1.42
LRRC20-201ENST00000355790 ABCC9O60706 1549 aa23.69■■□□□ 1.38
LRRC20-201ENST00000355790 MYO15BQ96JP2 1530 aa23.67■■□□□ 1.38
LRRC20-201ENST00000355790 DCAF1Q9Y4B6 1507 aa23.49■■□□□ 1.35
LRRC20-201ENST00000355790 PCGF6Q9BYE7 350 aa23.47■■□□□ 1.35
LRRC20-201ENST00000355790 HRCP23327 699 aa23.39■■□□□ 1.34
LRRC20-201ENST00000355790 LOC105371045A0A1W2PR82 267 aa23.33■■□□□ 1.33
LRRC20-201ENST00000355790 SCRIBQ14160 1630 aa23.09■■□□□ 1.29
LRRC20-201ENST00000355790 PPARGC1BQ86YN6 1023 aaKnown RBP22.99■■□□□ 1.27
LRRC20-201ENST00000355790 TRIM41Q8WV44 630 aa22.97■■□□□ 1.27
LRRC20-201ENST00000355790 RSF1Q96T23 1441 aaPredicted RBP22.94■■□□□ 1.26
LRRC20-201ENST00000355790 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
LRRC20-201ENST00000355790 TRIM26Q12899 539 aaPredicted RBP22.88■■□□□ 1.25
LRRC20-201ENST00000355790 EHMT2Q96KQ7 1210 aa22.84■■□□□ 1.25
LRRC20-201ENST00000355790 NACADO15069 1562 aa22.78■■□□□ 1.24
LRRC20-201ENST00000355790 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.24
LRRC20-201ENST00000355790 RB1CC1Q8TDY2 1594 aa22.65■■□□□ 1.22
LRRC20-201ENST00000355790 CECR2Q9BXF3 1484 aa22.58■■□□□ 1.21
LRRC20-201ENST00000355790 MROH2BQ7Z745 1585 aa22.46■■□□□ 1.19
LRRC20-201ENST00000355790 ZEB1P37275 1124 aaPredicted RBP22.44■■□□□ 1.18
LRRC20-201ENST00000355790 WIZO95785 1651 aa22.31■■□□□ 1.16
LRRC20-201ENST00000355790 BAZ1AQ9NRL2 1556 aaPredicted RBP22.13■■□□□ 1.13
LRRC20-201ENST00000355790 TTBK1Q5TCY1 1321 aaPredicted RBP22.11■■□□□ 1.13
LRRC20-201ENST00000355790 CCER1Q8TC90 406 aaPredicted RBP22.05■■□□□ 1.12
LRRC20-201ENST00000355790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.04■■□□□ 1.12
LRRC20-201ENST00000355790 UNC13AQ9UPW8 1703 aa21.97■■□□□ 1.11
LRRC20-201ENST00000355790 CCDC88BA6NC98 1476 aa21.95■■□□□ 1.1
LRRC20-201ENST00000355790 ABCC8Q09428 1581 aa21.95■■□□□ 1.1
LRRC20-201ENST00000355790 UBTFP17480 764 aaKnown RBP21.95■■□□□ 1.1
LRRC20-201ENST00000355790 TOP2AP11388 1531 aaKnown RBP21.93■■□□□ 1.1
LRRC20-201ENST00000355790 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
LRRC20-201ENST00000355790 BICRAQ9NZM4 1560 aa21.88■■□□□ 1.09
LRRC20-201ENST00000355790 CSRNP3Q8WYN3 585 aa21.84■■□□□ 1.09
LRRC20-201ENST00000355790 SOGA1O94964 1423 aa21.83■■□□□ 1.09
LRRC20-201ENST00000355790 EIF4G1Q04637 1599 aaKnown RBP21.83■■□□□ 1.09
LRRC20-201ENST00000355790 SMARCA2P51531 1590 aa21.81■■□□□ 1.08
LRRC20-201ENST00000355790 CEP162Q5TB80 1403 aa21.79■■□□□ 1.08
LRRC20-201ENST00000355790 TNIKQ9UKE5 1360 aa21.72■■□□□ 1.07
LRRC20-201ENST00000355790 RUSC2Q8N2Y8 1516 aa21.69■■□□□ 1.06
LRRC20-201ENST00000355790 EEA1Q15075 1411 aa21.66■■□□□ 1.06
LRRC20-201ENST00000355790 WRNQ14191 1432 aaPredicted RBP eCLIP21.66■■□□□ 1.062e-8■■■■■ 75.2
LRRC20-201ENST00000355790 SCAF1Q9H7N4 1312 aaKnown RBP21.64■■□□□ 1.05
LRRC20-201ENST00000355790 RANGAP1P46060 587 aaPredicted RBP21.62■■□□□ 1.05
LRRC20-201ENST00000355790 DIEXFQ68CQ4 756 aaKnown RBP21.6■■□□□ 1.05
LRRC20-201ENST00000355790 GOLGA3Q08378 1498 aa21.57■■□□□ 1.04
LRRC20-201ENST00000355790 BAZ1BQ9UIG0 1483 aaKnown RBP21.57■■□□□ 1.04
LRRC20-201ENST00000355790 ATAD2BQ9ULI0 1458 aa21.55■■□□□ 1.04
LRRC20-201ENST00000355790 APLP2Q06481 763 aa21.54■■□□□ 1.04
LRRC20-201ENST00000355790 HNRNPUL2Q1KMD3 747 aaKnown RBP21.54■■□□□ 1.04
LRRC20-201ENST00000355790 ACIN1Q9UKV3 1341 aaKnown RBP21.43■■□□□ 1.02
LRRC20-201ENST00000355790 CEP164Q9UPV0 1460 aa21.43■■□□□ 1.02
LRRC20-201ENST00000355790 CENPBP07199 599 aaPredicted RBP21.42■■□□□ 1.02
LRRC20-201ENST00000355790 CLIP1P30622 1438 aa21.41■■□□□ 1.02
LRRC20-201ENST00000355790 NEUROD1Q13562 356 aa21.41■■□□□ 1.02
LRRC20-201ENST00000355790 ZNF316A6NFI3 1004 aaPredicted RBP21.37■■□□□ 1.01
LRRC20-201ENST00000355790 PELP1Q8IZL8 1130 aaKnown RBP21.36■■□□□ 1.01
LRRC20-201ENST00000355790 SYNJ1O43426 1573 aa21.35■■□□□ 1.01
LRRC20-201ENST00000355790 PEG3Q9GZU2 1588 aa21.32■■□□□ 1
LRRC20-201ENST00000355790 GTF3C3Q9Y5Q9 886 aa21.27■■□□□ 1
LRRC20-201ENST00000355790 RAPGEF2Q9Y4G8 1499 aa21.26■□□□□ 0.99
LRRC20-201ENST00000355790 YTHDC1Q96MU7 727 aaKnown RBP21.25■□□□□ 0.99
LRRC20-201ENST00000355790 VPS8Q8N3P4 1428 aa21.25■□□□□ 0.99
LRRC20-201ENST00000355790 KIF21BO75037 1637 aa21.23■□□□□ 0.99
LRRC20-201ENST00000355790 NCAPD3P42695 1498 aa21.16■□□□□ 0.98
LRRC20-201ENST00000355790 MIER1Q8N108 512 aa21.09■□□□□ 0.97
LRRC20-201ENST00000355790 DNAJC5BQ9UF47 199 aa21.05■□□□□ 0.96
LRRC20-201ENST00000355790 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
LRRC20-201ENST00000355790 CC2D2AQ9P2K1 1620 aa21.02■□□□□ 0.95
LRRC20-201ENST00000355790 KANK4Q5T7N3 995 aaPredicted RBP21.01■□□□□ 0.95
LRRC20-201ENST00000355790 ITGAEP38570 1179 aa21■□□□□ 0.95
LRRC20-201ENST00000355790 KIF27Q86VH2 1401 aa20.97■□□□□ 0.95
LRRC20-201ENST00000355790 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
LRRC20-201ENST00000355790 PRXQ9BXM0 1461 aa20.94■□□□□ 0.94
LRRC20-201ENST00000355790 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
LRRC20-201ENST00000355790 ARAP1Q96P48 1450 aa20.89■□□□□ 0.93
LRRC20-201ENST00000355790 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.93
LRRC20-201ENST00000355790 BIVM-ERCC5R4GMW8 1640 aa20.88■□□□□ 0.93
LRRC20-201ENST00000355790 CUX1P39880 1505 aa20.88■□□□□ 0.93
LRRC20-201ENST00000355790 DHX57Q6P158 1386 aaKnown RBP20.85■□□□□ 0.93
LRRC20-201ENST00000355790 CLSPNQ9HAW4 1339 aa20.84■□□□□ 0.93
LRRC20-201ENST00000355790 CFTRP13569 1480 aa20.84■□□□□ 0.93
LRRC20-201ENST00000355790 ATP1B4Q9UN42 357 aaPredicted RBP20.82■□□□□ 0.92
LRRC20-201ENST00000355790 NESP48681 1621 aa20.8■□□□□ 0.92
LRRC20-201ENST00000355790 CCNB3Q8WWL7 1395 aa20.77■□□□□ 0.91
LRRC20-201ENST00000355790 CUX2O14529 1486 aa20.76■□□□□ 0.91
LRRC20-201ENST00000355790 P3H3Q8IVL6 736 aa20.74■□□□□ 0.91
LRRC20-201ENST00000355790 ARHGAP35Q9NRY4 1499 aa20.73■□□□□ 0.91
LRRC20-201ENST00000355790 FAM50AQ14320 339 aaKnown RBP20.7■□□□□ 0.9
LRRC20-201ENST00000355790 RRBP1Q9P2E9 1410 aaKnown RBP20.7■□□□□ 0.9
LRRC20-201ENST00000355790 IGF1RP08069 1367 aa20.7■□□□□ 0.9
LRRC20-201ENST00000355790 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
LRRC20-201ENST00000355790 CARMIL1Q5VZK9 1371 aa20.69■□□□□ 0.9
LRRC20-201ENST00000355790 RAB3GAP2Q9H2M9 1393 aa20.6■□□□□ 0.89
LRRC20-201ENST00000355790 FGD5Q6ZNL6 1462 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms