RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 CUL7Q14999 1698 aa9.94□□□□□ -0.82
CD47-201ENST00000355354 DIP2BQ9P265 1576 aa9.93□□□□□ -0.82
CD47-201ENST00000355354 GRIN2BQ13224 1484 aa9.93□□□□□ -0.82
CD47-201ENST00000355354 FAM9AQ8IZU1 332 aaPredicted RBP9.92□□□□□ -0.82
CD47-201ENST00000355354 MAP3K4Q9Y6R4 1608 aa9.92□□□□□ -0.82
CD47-201ENST00000355354 GRIN2AQ12879 1464 aa9.91□□□□□ -0.82
CD47-201ENST00000355354 LAMA2P24043 3122 aaKnown RBP9.9□□□□□ -0.82
CD47-201ENST00000355354 CTTNBP2Q8WZ74 1663 aa9.87□□□□□ -0.83
CD47-201ENST00000355354 GLI2P10070 1586 aa9.87□□□□□ -0.83
CD47-201ENST00000355354 TTBK1Q5TCY1 1321 aaPredicted RBP9.85□□□□□ -0.83
CD47-201ENST00000355354 GAPVD1Q14C86 1478 aa9.84□□□□□ -0.83
CD47-201ENST00000355354 SOGA1O94964 1423 aa9.82□□□□□ -0.84
CD47-201ENST00000355354 CDH23Q9H251 3354 aa9.81□□□□□ -0.84
CD47-201ENST00000355354 HRCP23327 699 aa9.79□□□□□ -0.84
CD47-201ENST00000355354 KDM5BQ9UGL1 1544 aa9.78□□□□□ -0.84
CD47-201ENST00000355354 SIGLEC1Q9BZZ2 1709 aa9.78□□□□□ -0.84
CD47-201ENST00000355354 OSCARQ8IYS5 282 aa9.78□□□□□ -0.84
CD47-201ENST00000355354 LRRIQ1Q96JM4 1722 aa9.76□□□□□ -0.85
CD47-201ENST00000355354 CEP350Q5VT06 3117 aa9.75□□□□□ -0.85
CD47-201ENST00000355354 ABCC2Q92887 1545 aa9.75□□□□□ -0.85
CD47-201ENST00000355354 VCANP13611 3396 aa9.74□□□□□ -0.85
CD47-201ENST00000355354 FHAD1B1AJZ9 1412 aa9.74□□□□□ -0.85
CD47-201ENST00000355354 UHRF1BP1LA0JNW5 1464 aa9.74□□□□□ -0.85
CD47-201ENST00000355354 DISP1Q96F81 1524 aa9.73□□□□□ -0.85
CD47-201ENST00000355354 SAMD9Q5K651 1589 aa9.73□□□□□ -0.85
CD47-201ENST00000355354 ZCCHC11Q5TAX3 1644 aaKnown RBP9.73□□□□□ -0.85
CD47-201ENST00000355354 UGGT2Q9NYU1 1516 aa9.73□□□□□ -0.85
CD47-201ENST00000355354 XIRP2A4UGR9 3374 aa9.7□□□□□ -0.86
CD47-201ENST00000355354 ABCC10Q5T3U5 1492 aa9.7□□□□□ -0.86
CD47-201ENST00000355354 KIAA0556O60303 1618 aa9.7□□□□□ -0.86
CD47-201ENST00000355354 BRCA2P51587 3418 aa9.69□□□□□ -0.86
CD47-201ENST00000355354 ABCA8O94911 1581 aa9.69□□□□□ -0.86
CD47-201ENST00000355354 FRMPD1Q5SYB0 1578 aa9.69□□□□□ -0.86
CD47-201ENST00000355354 TDRD9Q8NDG6 1382 aaKnown RBP9.69□□□□□ -0.86
CD47-201ENST00000355354 SCAF1Q9H7N4 1312 aaKnown RBP9.69□□□□□ -0.86
CD47-201ENST00000355354 CFAP43Q8NDM7 1665 aa9.68□□□□□ -0.86
CD47-201ENST00000355354 WRNQ14191 1432 aaPredicted RBP eCLIP9.64□□□□□ -0.87
CD47-201ENST00000355354 KIAA0586Q9BVV6 1533 aa9.64□□□□□ -0.87
CD47-201ENST00000355354 IQGAP2Q13576 1575 aa9.64□□□□□ -0.87
CD47-201ENST00000355354 RICTORQ6R327 1708 aa9.63□□□□□ -0.87
CD47-201ENST00000355354 ADAMTSL3P82987 1691 aa9.62□□□□□ -0.87
CD47-201ENST00000355354 ABCA9Q8IUA7 1624 aa9.61□□□□□ -0.87
CD47-201ENST00000355354 IGF1RP08069 1367 aa9.58□□□□□ -0.88
CD47-201ENST00000355354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.57□□□□□ -0.88
CD47-201ENST00000355354 TSPOAP1O95153 1857 aa9.57□□□□□ -0.88
CD47-201ENST00000355354 PRXQ9BXM0 1461 aa9.55□□□□□ -0.88
CD47-201ENST00000355354 COL17A1Q9UMD9 1497 aaPredicted RBP9.54□□□□□ -0.88
CD47-201ENST00000355354 KDM6BO15054 1643 aa9.53□□□□□ -0.88
CD47-201ENST00000355354 EPRSP07814 1512 aaKnown RBP9.51□□□□□ -0.89
CD47-201ENST00000355354 BCORL1Q5H9F3 1711 aa9.5□□□□□ -0.89
CD47-201ENST00000355354 PRG4Q92954 1404 aaPredicted RBP9.49□□□□□ -0.89
CD47-201ENST00000355354 MAGI3Q5TCQ9 1506 aa9.49□□□□□ -0.89
CD47-201ENST00000355354 ZMYM4Q5VZL5 1548 aa9.48□□□□□ -0.89
CD47-201ENST00000355354 KIF21BO75037 1637 aa9.46□□□□□ -0.89
CD47-201ENST00000355354 ARAP3Q8WWN8 1544 aa9.46□□□□□ -0.9
CD47-201ENST00000355354 NEUROD1Q13562 356 aa9.44□□□□□ -0.9
CD47-201ENST00000355354 REREQ9P2R6 1566 aa9.43□□□□□ -0.9
CD47-201ENST00000355354 TRIM41Q8WV44 630 aa9.43□□□□□ -0.9
CD47-201ENST00000355354 RAPGEF6Q8TEU7 1601 aa9.42□□□□□ -0.9
CD47-201ENST00000355354 KCNH8Q96L42 1107 aa9.42□□□□□ -0.9
CD47-201ENST00000355354 CDC42BPBQ9Y5S2 1711 aa9.42□□□□□ -0.9
CD47-201ENST00000355354 MKI67P46013 3256 aaKnown RBP9.41□□□□□ -0.9
CD47-201ENST00000355354 FER1L4A9Z1Z3 1794 aa9.41□□□□□ -0.9
CD47-201ENST00000355354 STRCQ7RTU9 1775 aa9.41□□□□□ -0.9
CD47-201ENST00000355354 ARHGEF40Q8TER5 1519 aa9.38□□□□□ -0.91
CD47-201ENST00000355354 KDM5CP41229 1560 aa9.38□□□□□ -0.91
CD47-201ENST00000355354 TTC37Q6PGP7 1564 aa9.38□□□□□ -0.91
CD47-201ENST00000355354 HECW2Q9P2P5 1572 aa9.36□□□□□ -0.91
CD47-201ENST00000355354 RAPGEF2Q9Y4G8 1499 aa9.36□□□□□ -0.91
CD47-201ENST00000355354 KIF27Q86VH2 1401 aa9.36□□□□□ -0.91
CD47-201ENST00000355354 ASXL2Q76L83 1435 aa9.36□□□□□ -0.91
CD47-201ENST00000355354 RANGAP1P46060 587 aaPredicted RBP9.36□□□□□ -0.91
CD47-201ENST00000355354 CYB5RLQ6IPT4 315 aa9.36□□□□□ -0.91
CD47-201ENST00000355354 CDC42BPAQ5VT25 1732 aa9.35□□□□□ -0.91
CD47-201ENST00000355354 PLB1Q6P1J6 1458 aa9.35□□□□□ -0.91
CD47-201ENST00000355354 WDR7Q9Y4E6 1490 aa9.35□□□□□ -0.91
CD47-201ENST00000355354 ITSN2Q9NZM3 1697 aa9.34□□□□□ -0.91
CD47-201ENST00000355354 CFAP74Q9C0B2 1584 aa9.34□□□□□ -0.91
CD47-201ENST00000355354 MROH2AA6NES4 1674 aa9.34□□□□□ -0.91
CD47-201ENST00000355354 ZNF142P52746 1687 aaPredicted RBP9.33□□□□□ -0.92
CD47-201ENST00000355354 UACAQ9BZF9 1416 aa9.33□□□□□ -0.92
CD47-201ENST00000355354 SPEGQ15772 3267 aa9.33□□□□□ -0.92
CD47-201ENST00000355354 MYO5CQ9NQX4 1742 aa9.32□□□□□ -0.92
CD47-201ENST00000355354 KDM4FA0A1W2PPD8 638 aa9.32□□□□□ -0.92
CD47-201ENST00000355354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.32□□□□□ -0.928e-9■■■■■ 57.3
CD47-201ENST00000355354 A0A0C4DFX4 3053 aa9.31□□□□□ -0.92
CD47-201ENST00000355354 NUP153P49790 1475 aaKnown RBP9.31□□□□□ -0.92
CD47-201ENST00000355354 TNIKQ9UKE5 1360 aa9.31□□□□□ -0.92
CD47-201ENST00000355354 PREX2Q70Z35 1606 aa9.31□□□□□ -0.92
CD47-201ENST00000355354 PLXNC1O60486 1568 aa9.3□□□□□ -0.92
CD47-201ENST00000355354 ADGRL1O94910 1474 aa9.3□□□□□ -0.92
CD47-201ENST00000355354 DNAH12Q6ZR08 3092 aa9.29□□□□□ -0.92
CD47-201ENST00000355354 UNC80Q8N2C7 3258 aa9.29□□□□□ -0.92
CD47-201ENST00000355354 WDR87Q6ZQQ6 2873 aa9.29□□□□□ -0.92
CD47-201ENST00000355354 EFCAB5A4FU69 1503 aa9.29□□□□□ -0.92
CD47-201ENST00000355354 ATP10BO94823 1461 aa9.28□□□□□ -0.92
CD47-201ENST00000355354 MADDQ8WXG6 1647 aa9.28□□□□□ -0.92
CD47-201ENST00000355354 JPH4Q96JJ6 628 aa9.28□□□□□ -0.92
CD47-201ENST00000355354 KIDINS220Q9ULH0 1771 aa9.28□□□□□ -0.92
CD47-201ENST00000355354 ARHGEF12Q9NZN5 1544 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms