RNA–Protein interactions for RNA: ENST00000354532.7

ARHGEF1-203, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-203ENST00000354532 ERICH3Q5RHP9 1530 aa18.91■□□□□ 0.62
ARHGEF1-203ENST00000354532 PRXQ9BXM0 1461 aa18.91■□□□□ 0.62
ARHGEF1-203ENST00000354532 TDRD9Q8NDG6 1382 aaKnown RBP18.9■□□□□ 0.62
ARHGEF1-203ENST00000354532 IGF1RP08069 1367 aa18.9■□□□□ 0.62
ARHGEF1-203ENST00000354532 DNMBPQ6XZF7 1577 aa18.88■□□□□ 0.61
ARHGEF1-203ENST00000354532 KIF21AQ7Z4S6 1674 aa18.86■□□□□ 0.61
ARHGEF1-203ENST00000354532 CARMIL1Q5VZK9 1371 aa18.84■□□□□ 0.61
ARHGEF1-203ENST00000354532 ANP32EQ9BTT0 268 aa18.83■□□□□ 0.61
ARHGEF1-203ENST00000354532 MAPKBP1O60336 1514 aa18.81■□□□□ 0.6
ARHGEF1-203ENST00000354532 ERCC6Q03468 1493 aa18.8■□□□□ 0.6
ARHGEF1-203ENST00000354532 P3H3Q8IVL6 736 aa18.8■□□□□ 0.6
ARHGEF1-203ENST00000354532 CCNB3Q8WWL7 1395 aa18.79■□□□□ 0.6
ARHGEF1-203ENST00000354532 ARHGAP35Q9NRY4 1499 aa18.73■□□□□ 0.59
ARHGEF1-203ENST00000354532 ABCA10Q8WWZ4 1543 aa18.73■□□□□ 0.59
ARHGEF1-203ENST00000354532 RAB3GAP2Q9H2M9 1393 aa18.73■□□□□ 0.59
ARHGEF1-203ENST00000354532 ATP1B4Q9UN42 357 aaPredicted RBP18.72■□□□□ 0.59
ARHGEF1-203ENST00000354532 BCANQ96GW7 911 aa18.71■□□□□ 0.59
ARHGEF1-203ENST00000354532 ITGAEP38570 1179 aa18.7■□□□□ 0.58
ARHGEF1-203ENST00000354532 AQRO60306 1485 aaKnown RBP eCLIP18.69■□□□□ 0.581e-6■■■■■ 36
ARHGEF1-203ENST00000354532 MRC2Q9UBG0 1479 aa18.69■□□□□ 0.58
ARHGEF1-203ENST00000354532 WDR97A6NE52 1622 aa18.69■□□□□ 0.58
ARHGEF1-203ENST00000354532 GAPVD1Q14C86 1478 aa18.67■□□□□ 0.58
ARHGEF1-203ENST00000354532 FKBP8Q14318 412 aa18.66■□□□□ 0.58
ARHGEF1-203ENST00000354532 DDX10Q13206 875 aaKnown RBP18.63■□□□□ 0.57
ARHGEF1-203ENST00000354532 PPP1R15AO75807 674 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF1-203ENST00000354532 FBLN2P98095 1184 aa18.61■□□□□ 0.57
ARHGEF1-203ENST00000354532 TIAM1Q13009 1591 aa18.6■□□□□ 0.57
ARHGEF1-203ENST00000354532 SIN3AQ96ST3 1273 aa18.6■□□□□ 0.57
ARHGEF1-203ENST00000354532 SETD5Q9C0A6 1442 aa18.59■□□□□ 0.57
ARHGEF1-203ENST00000354532 ZNF608Q9ULD9 1512 aaPredicted RBP18.59■□□□□ 0.57
ARHGEF1-203ENST00000354532 BCL11AQ9H165 835 aa18.56■□□□□ 0.56
ARHGEF1-203ENST00000354532 RBM19Q9Y4C8 960 aaKnown RBP18.55■□□□□ 0.56
ARHGEF1-203ENST00000354532 MAP3K1Q13233 1512 aa18.55■□□□□ 0.56
ARHGEF1-203ENST00000354532 PHLDB1Q86UU1 1377 aa18.54■□□□□ 0.56
ARHGEF1-203ENST00000354532 TARBP1Q13395 1621 aaKnown RBP18.53■□□□□ 0.56
ARHGEF1-203ENST00000354532 LRRC9Q6ZRR7 1453 aa18.52■□□□□ 0.56
ARHGEF1-203ENST00000354532 HIRIP3Q9BW71 556 aaPredicted RBP18.51■□□□□ 0.55
ARHGEF1-203ENST00000354532 ABCA5Q8WWZ7 1642 aa18.5■□□□□ 0.55
ARHGEF1-203ENST00000354532 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
ARHGEF1-203ENST00000354532 FHOD3Q2V2M9 1422 aa18.48■□□□□ 0.55
ARHGEF1-203ENST00000354532 WDR62O43379 1518 aa18.48■□□□□ 0.55
ARHGEF1-203ENST00000354532 CCER2I3L3R5 266 aa18.47■□□□□ 0.55
ARHGEF1-203ENST00000354532 IFT140Q96RY7 1462 aa18.46■□□□□ 0.55
ARHGEF1-203ENST00000354532 CUL7Q14999 1698 aa18.45■□□□□ 0.54
ARHGEF1-203ENST00000354532 ARID3CA6NKF2 412 aa18.44■□□□□ 0.54
ARHGEF1-203ENST00000354532 CHMP7Q8WUX9 453 aaPredicted RBP18.44■□□□□ 0.54
ARHGEF1-203ENST00000354532 CFAP43Q8NDM7 1665 aa18.44■□□□□ 0.54
ARHGEF1-203ENST00000354532 TIMELESSQ9UNS1 1208 aa18.43■□□□□ 0.54
ARHGEF1-203ENST00000354532 GRIN2BQ13224 1484 aa18.42■□□□□ 0.54
ARHGEF1-203ENST00000354532 MSH5O43196 834 aa18.42■□□□□ 0.54
ARHGEF1-203ENST00000354532 FAM50AQ14320 339 aaKnown RBP18.42■□□□□ 0.54
ARHGEF1-203ENST00000354532 NEFLP07196 543 aa18.41■□□□□ 0.54
ARHGEF1-203ENST00000354532 FHAD1B1AJZ9 1412 aa18.39■□□□□ 0.54
ARHGEF1-203ENST00000354532 PCF11O94913 1555 aaKnown RBP18.39■□□□□ 0.53
ARHGEF1-203ENST00000354532 THOC2Q8NI27 1593 aaKnown RBP18.39■□□□□ 0.53
ARHGEF1-203ENST00000354532 ANP32CO43423 234 aa18.39■□□□□ 0.53
ARHGEF1-203ENST00000354532 SNAPC4Q5SXM2 1469 aa18.38■□□□□ 0.53
ARHGEF1-203ENST00000354532 PBRM1Q86U86 1689 aa18.36■□□□□ 0.53
ARHGEF1-203ENST00000354532 EIF4G3O43432 1585 aaKnown RBP18.33■□□□□ 0.52
ARHGEF1-203ENST00000354532 CTTNBP2Q8WZ74 1663 aa18.3■□□□□ 0.52
ARHGEF1-203ENST00000354532 ADAMTS12P58397 1594 aa18.28■□□□□ 0.52
ARHGEF1-203ENST00000354532 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.28■□□□□ 0.524e-7■□□□□ 8.1
ARHGEF1-203ENST00000354532 KDM5BQ9UGL1 1544 aa18.27■□□□□ 0.52
ARHGEF1-203ENST00000354532 FANCIQ9NVI1 1328 aa18.25■□□□□ 0.51
ARHGEF1-203ENST00000354532 PTPRKQ15262 1439 aa18.24■□□□□ 0.51
ARHGEF1-203ENST00000354532 TONSLQ96HA7 1378 aa18.24■□□□□ 0.51
ARHGEF1-203ENST00000354532 IRX6P78412 446 aaPredicted RBP18.24■□□□□ 0.51
ARHGEF1-203ENST00000354532 CCDC18Q5T9S5 1454 aa18.23■□□□□ 0.51
ARHGEF1-203ENST00000354532 FYCO1Q9BQS8 1478 aa18.23■□□□□ 0.51
ARHGEF1-203ENST00000354532 GRIN2AQ12879 1464 aa18.22■□□□□ 0.51
ARHGEF1-203ENST00000354532 FMN1Q68DA7 1419 aa18.22■□□□□ 0.51
ARHGEF1-203ENST00000354532 EFCAB5A4FU69 1503 aa18.21■□□□□ 0.51
ARHGEF1-203ENST00000354532 HNRNPUQ00839 825 aaKnown RBP eCLIP18.2■□□□□ 0.5
ARHGEF1-203ENST00000354532 FGD6Q6ZV73 1430 aa18.2■□□□□ 0.5
ARHGEF1-203ENST00000354532 IQGAP2Q13576 1575 aa18.2■□□□□ 0.5
ARHGEF1-203ENST00000354532 PTPN23Q9H3S7 1636 aa18.2■□□□□ 0.5
ARHGEF1-203ENST00000354532 CASKIN1Q8WXD9 1431 aa18.2■□□□□ 0.5
ARHGEF1-203ENST00000354532 UACAQ9BZF9 1416 aa18.2■□□□□ 0.5
ARHGEF1-203ENST00000354532 HFM1A2PYH4 1435 aa18.18■□□□□ 0.5
ARHGEF1-203ENST00000354532 JPH4Q96JJ6 628 aa18.18■□□□□ 0.5
ARHGEF1-203ENST00000354532 MTUS2Q5JR59 1369 aa18.17■□□□□ 0.5
ARHGEF1-203ENST00000354532 SYNJ2O15056 1496 aa18.16■□□□□ 0.5
ARHGEF1-203ENST00000354532 MAGI1Q96QZ7 1491 aaPredicted RBP18.16■□□□□ 0.5
ARHGEF1-203ENST00000354532 WASHC2AQ641Q2 1341 aa18.14■□□□□ 0.49
ARHGEF1-203ENST00000354532 KIAA0586Q9BVV6 1533 aa18.14■□□□□ 0.49
ARHGEF1-203ENST00000354532 CDK11AQ9UQ88 783 aaPredicted RBP18.14■□□□□ 0.49
ARHGEF1-203ENST00000354532 NAIPQ13075 1403 aa18.13■□□□□ 0.49
ARHGEF1-203ENST00000354532 LRRIQ1Q96JM4 1722 aa18.13■□□□□ 0.49
ARHGEF1-203ENST00000354532 CCDC184Q52MB2 194 aa18.12■□□□□ 0.49
ARHGEF1-203ENST00000354532 SAMD9Q5K651 1589 aa18.11■□□□□ 0.49
ARHGEF1-203ENST00000354532 DENND4BO75064 1496 aaPredicted RBP18.09■□□□□ 0.49
ARHGEF1-203ENST00000354532 CEP170Q5SW79 1584 aa18.08■□□□□ 0.49
ARHGEF1-203ENST00000354532 NCOA2Q15596 1464 aa18.07■□□□□ 0.48
ARHGEF1-203ENST00000354532 HSPA5P11021 654 aaKnown RBP18.07■□□□□ 0.48
ARHGEF1-203ENST00000354532 ERICH6BQ5W0A0 696 aa18.05■□□□□ 0.48
ARHGEF1-203ENST00000354532 PPP4R2Q9NY27 417 aa18.05■□□□□ 0.48
ARHGEF1-203ENST00000354532 DISP1Q96F81 1524 aa18.05■□□□□ 0.48
ARHGEF1-203ENST00000354532 CDK13Q14004 1512 aaKnown RBP18.03■□□□□ 0.48
ARHGEF1-203ENST00000354532 UGGT2Q9NYU1 1516 aa18.02■□□□□ 0.48
ARHGEF1-203ENST00000354532 MYOM3Q5VTT5 1437 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms